| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691528
Identifier: 213691528
GI number: 213691528
Start: 719980
End: 721398
Strand: Direct
Name: 213691528
Synonym: Blon_0629
Alternate gene names: NA
Gene position: 719980-721398 (Clockwise)
Preceding gene: 213691527
Following gene: 213691529
Centisome position: 25.42
GC content: 54.12
Gene sequence:
>1419_bases ATGAGAATCTGCCTGGTTTTGGAAGGATGCTACCCGTACGTGCATGGTGGCGTGTCCACGTGGATGCATAGTTATATCGA AGCGATGAAAGAGCACGAGTTCGTATTGTGGGTGATCGGCGCCAAAGCCGAAGACCGCGGCAAATTCGTATATGACCTGC CCGGCAATGTGGTGGAAGTGCATGAGGTGTTCCTCGACGACGCCTTGCGTCTGAGCGGTGAACGAGCGCAAGTGTCGTTC ACCGAGGGGGAATTGCGGTCATTGCGCGAACTGGTGAATCTTGGCAGCCCGGACTGGGATGTGCTTTTCAACCTGTTCCA CACAAGAGGCGTGCATCCGCTTTCGTTCCTGCAAAGCCGTGAATTCATCGACCTGTTTACGCAAATCTGCATGGAAGAAT ATCCGTATGTGGCCTATGCCGACGCTTTCCATACTGTGCGCTCCATGTTGCTGCCGGTGTTGTACTTGATGGGCGGCGAA GTGCCGGAAGCGCAGATATACCATGCGATTTCCACCGGATATGGCGGATTGCTGGCTTGTTTGGGCGGTTCCATCAACCA TGCGCCGGTATTGCTTACGGAACATGGCATTTATACGCGCGAACGTGAAGAGGAGATTATTTCCGCCGAATGGGTGTTGC CGGCTTTCCGTCCGCGTTGGATTCGTTTCTTCTACATGCTTTCAGAACATATCTACCAGCGTGCATGGCGTGTCACTAGT TTGTTCGGTCGTGCCCGTCTTATCCAAATCGGTATGGGTGCTCCCGCCGATGCCTGCCAGGTTATTCCCAATGGCATTCA ATACGAACGTTTTTGTGATATTCCCCTGAAGCCCGATGACGGTTGGGTCGATATCGGTGCGGTGGTGCGCATGGCTCCCA TCAAAGACGTGAAGACCCTGATTCACGCGTTTCATGGGCTTTCATCTCGTGTTGACAACGTTCGCCTGCATATTCTCGGC GGTGTTGACGATCAGGAGTATGCCGACGAATGCCATGAGCTTGTGGAGCAGTTGGGTGTGCGCAATCTTGAGTTCACAGG ACGTGTGAACGTGGTCGAATACATGCGCAAGCTTGATTTCACCGTGTTGACCAGCATTTCCGAAGGCCAACCATTGTCGG TGTTGGAATCGTTCGCAGCCGCACGCCCGTGCGTGACCACTGATGTTGGCTGTTGCCGTGAGCTTTTGGAAGGCGAGGAT GGCGACGATTTCGGCACTGCCGGCTTTTATGTGCCTCCCATGTACCGCGAAGGCTTAAGCGGGGCGATGGAACGCATGTG TTCCAGCCGTACGTTGCGTGAAACCATGGGGCAGATCGGCCGCAATCGTGTGAACGCCTATTACCGTCATGAGCGCATGC TTGACGATTATCGCAAGCTGTATGCCGATACCGCGGATCAGTTCGGATTGGAACGCTGA
Upstream 100 bases:
>100_bases GGGTTCGTGGCGGAAGCCTCACCAAGCTGACCGGGAATCTGTATCTGCTCAAAGCCACGAGCGCCACGGTTCATATCGAA CGCAAGACCGGGGGAGAGGC
Downstream 100 bases:
>100_bases TATGGCCGGTATTGGATTTGAACTGAAGAAACTGTTCCATCGTAGGGGCTTGATGGCGATGCTGCGAGCCTACGGCTATG CCGGCGTGATTTGCGCCGGC
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Lipopolysaccharide Biosynthesis Protein-Related Protein; Glycosyl Transferase Group 1 Family; Glycosyltransferase I; Glycosyl Transferase Group 1 Protein; Lipopolysaccharide Glycosyltransferase; Lipopolysaccharide Biosynthesis Protein; Lipopolysaccharide N-Acetylglucosaminyltransferase; Sugar Transferase; Transferase; Lipopolysaccharide N- Acetylglucosaminyltransferase; Lipopolysaccharide N-Acetylglucosaminyl Transferase; Polysaccharide Biosynthesis Protein; ABC Transporter Permease; Glycosyl Transferase GT4 Family Protein; Glycosyl Transferase Family Protein; Glycogen Synthase; Glycosyl Transferase
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MRICLVLEGCYPYVHGGVSTWMHSYIEAMKEHEFVLWVIGAKAEDRGKFVYDLPGNVVEVHEVFLDDALRLSGERAQVSF TEGELRSLRELVNLGSPDWDVLFNLFHTRGVHPLSFLQSREFIDLFTQICMEEYPYVAYADAFHTVRSMLLPVLYLMGGE VPEAQIYHAISTGYGGLLACLGGSINHAPVLLTEHGIYTREREEEIISAEWVLPAFRPRWIRFFYMLSEHIYQRAWRVTS LFGRARLIQIGMGAPADACQVIPNGIQYERFCDIPLKPDDGWVDIGAVVRMAPIKDVKTLIHAFHGLSSRVDNVRLHILG GVDDQEYADECHELVEQLGVRNLEFTGRVNVVEYMRKLDFTVLTSISEGQPLSVLESFAAARPCVTTDVGCCRELLEGED GDDFGTAGFYVPPMYREGLSGAMERMCSSRTLRETMGQIGRNRVNAYYRHERMLDDYRKLYADTADQFGLER
Sequences:
>Translated_472_residues MRICLVLEGCYPYVHGGVSTWMHSYIEAMKEHEFVLWVIGAKAEDRGKFVYDLPGNVVEVHEVFLDDALRLSGERAQVSF TEGELRSLRELVNLGSPDWDVLFNLFHTRGVHPLSFLQSREFIDLFTQICMEEYPYVAYADAFHTVRSMLLPVLYLMGGE VPEAQIYHAISTGYGGLLACLGGSINHAPVLLTEHGIYTREREEEIISAEWVLPAFRPRWIRFFYMLSEHIYQRAWRVTS LFGRARLIQIGMGAPADACQVIPNGIQYERFCDIPLKPDDGWVDIGAVVRMAPIKDVKTLIHAFHGLSSRVDNVRLHILG GVDDQEYADECHELVEQLGVRNLEFTGRVNVVEYMRKLDFTVLTSISEGQPLSVLESFAAARPCVTTDVGCCRELLEGED GDDFGTAGFYVPPMYREGLSGAMERMCSSRTLRETMGQIGRNRVNAYYRHERMLDDYRKLYADTADQFGLER >Mature_472_residues MRICLVLEGCYPYVHGGVSTWMHSYIEAMKEHEFVLWVIGAKAEDRGKFVYDLPGNVVEVHEVFLDDALRLSGERAQVSF TEGELRSLRELVNLGSPDWDVLFNLFHTRGVHPLSFLQSREFIDLFTQICMEEYPYVAYADAFHTVRSMLLPVLYLMGGE VPEAQIYHAISTGYGGLLACLGGSINHAPVLLTEHGIYTREREEEIISAEWVLPAFRPRWIRFFYMLSEHIYQRAWRVTS LFGRARLIQIGMGAPADACQVIPNGIQYERFCDIPLKPDDGWVDIGAVVRMAPIKDVKTLIHAFHGLSSRVDNVRLHILG GVDDQEYADECHELVEQLGVRNLEFTGRVNVVEYMRKLDFTVLTSISEGQPLSVLESFAAARPCVTTDVGCCRELLEGED GDDFGTAGFYVPPMYREGLSGAMERMCSSRTLRETMGQIGRNRVNAYYRHERMLDDYRKLYADTADQFGLER
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53697; Mature: 53697
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRICLVLEGCYPYVHGGVSTWMHSYIEAMKEHEFVLWVIGAKAEDRGKFVYDLPGNVVEV CEEEEEEECCCHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCHHHH HEVFLDDALRLSGERAQVSFTEGELRSLRELVNLGSPDWDVLFNLFHTRGVHPLSFLQSR HHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH EFIDLFTQICMEEYPYVAYADAFHTVRSMLLPVLYLMGGEVPEAQIYHAISTGYGGLLAC HHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHH LGGSINHAPVLLTEHGIYTREREEEIISAEWVLPAFRPRWIRFFYMLSEHIYQRAWRVTS HCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LFGRARLIQIGMGAPADACQVIPNGIQYERFCDIPLKPDDGWVDIGAVVRMAPIKDVKTL HHCCCEEEEECCCCCHHHHHHCCCCCCCHHEECCCCCCCCCCEEHHHHHHHCCHHHHHHH IHAFHGLSSRVDNVRLHILGGVDDQEYADECHELVEQLGVRNLEFTGRVNVVEYMRKLDF HHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCH TVLTSISEGQPLSVLESFAAARPCVTTDVGCCRELLEGEDGDDFGTAGFYVPPMYREGLS HHEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH GAMERMCSSRTLRETMGQIGRNRVNAYYRHERMLDDYRKLYADTADQFGLER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC >Mature Secondary Structure MRICLVLEGCYPYVHGGVSTWMHSYIEAMKEHEFVLWVIGAKAEDRGKFVYDLPGNVVEV CEEEEEEECCCHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCHHHH HEVFLDDALRLSGERAQVSFTEGELRSLRELVNLGSPDWDVLFNLFHTRGVHPLSFLQSR HHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH EFIDLFTQICMEEYPYVAYADAFHTVRSMLLPVLYLMGGEVPEAQIYHAISTGYGGLLAC HHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHH LGGSINHAPVLLTEHGIYTREREEEIISAEWVLPAFRPRWIRFFYMLSEHIYQRAWRVTS HCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LFGRARLIQIGMGAPADACQVIPNGIQYERFCDIPLKPDDGWVDIGAVVRMAPIKDVKTL HHCCCEEEEECCCCCHHHHHHCCCCCCCHHEECCCCCCCCCCEEHHHHHHHCCHHHHHHH IHAFHGLSSRVDNVRLHILGGVDDQEYADECHELVEQLGVRNLEFTGRVNVVEYMRKLDF HHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCH TVLTSISEGQPLSVLESFAAARPCVTTDVGCCRELLEGEDGDDFGTAGFYVPPMYREGLS HHEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH GAMERMCSSRTLRETMGQIGRNRVNAYYRHERMLDDYRKLYADTADQFGLER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA