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The map label for this gene is yfdZ [C]

Identifier: 213691504

GI number: 213691504

Start: 684264

End: 685487

Strand: Direct

Name: yfdZ [C]

Synonym: Blon_0602

Alternate gene names: 213691504

Gene position: 684264-685487 (Clockwise)

Preceding gene: 213691502

Following gene: 213691506

Centisome position: 24.16

GC content: 63.4

Gene sequence:

>1224_bases
ATGGAAAACGAAGCAGCGCAGCAGCCCCAATCTCCGGCCGCGTCTCCAGTCATGTCCCGCCGAGCGCGTGAGGCCAATCC
CTTCCGTGCCATGGTATTCGGCGAACAAGCAGACAAGATGCTCGCCCAAGGTATCAGCGTCATCAAATTAAGCCTTGGCG
AGCCCGATTTCGGCGCGCCGCCCGCCGTACGCGACGCCATGCGCGAACAGTACGACGGCCGGGCCCTGCCGTACACCGCC
GCCATGGGCCTACCTGAACTGCGCCAAGCCATCGCCGACTTCTACCATGAACGTCACGACCTTGACATTGACCCCAAGCG
CATTTGTGTAACAGCCGGCGGTTCGGCCGCCCTGCTGTTGGCCACCGCGCTGACCGTGGACCCCGGTGACGATGTGATTG
TGGCCGACCCCTCCTACCCGTGCAATCGCGAACTCGTGCGCTCCTTTGAAGGCCAGGTCATCGACGTGCCGACCTCGGCC
GCCACCCGCTTCCATCTGACCGCCGACCTGTGCAGCCAGTACTGGACGAGCAAGACCAAGGCCGTGATGATCACGTCGCC
GTCCAACCCCACCGGCACCACCATCGATTTCACCGTATTGGACGAGGTGTGCAAGCTGGCCGCCAGCCGCGGCGCATGGC
GCATCGTGGACGAAACCTACCTTGATTTGGCCGACCGTGAGCCGGACGGCACCGAAGTCAAGTCCGTACTGGCCTGCGAT
CCCGGTGCCATCGTGTGCAACAGCTTCTCCAAGTTCTTCGGCATGACCGGCTGGCGTCTCGGCTGGGCTATTCTGCCCGA
CGACCCCACCGTGCTGGAAGCGGTCGACGACCTGGCCACCAACTACTACCTGTGCGCCCACACGCCCACGCAACATGCGG
CGCTCGCCTGCTTCATGCCGGAAAGCTTGGCGGAATGCGAAGCTCGTCGTCAGGAATTGCTGGCCCGTCGCCGCATTGTG
ATTGACGGGCTCAAGCGCATCGGTTTGCCGGTTGAAGTCGAGCCGAACGGCGCGTTCTACGCCTACTTCAACATCTCCCG
CACTGGTCTGGATGCCTGGACGTTCTGCGAACGTGTGCTGGATGAAGCCCATGTGGCTCTGACTCCTGGCCGCGACTTCG
GTGCGGCCACGGCGGATACGCATGTGCGCCTGAGCTATGCCGCCTCACGTGAGGCCCTGACCGAGGGGCTGGAACGTCTC
GGAACGTTCGTCGAATCGCTGTGA

Upstream 100 bases:

>100_bases
GACTCATTATTCCTCCTTGAATACGGGTTGGTACACTCAATCGACCTACAGTGATTATAGAAGAAGAGACCTTGTCCCGT
GAGGCGGATAGAACCGAAAT

Downstream 100 bases:

>100_bases
ACCGTGCGGCAGCCGGTGTGATTGTTGTACAGTAGTCGAATTTGTGTGATGTCCGGCTGGCCTCGCGGTGTTGGTTGCCT
GCCGAACGACTCGCCATGGT

Product: aminotransferase, class I and II

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MENEAAQQPQSPAASPVMSRRAREANPFRAMVFGEQADKMLAQGISVIKLSLGEPDFGAPPAVRDAMREQYDGRALPYTA
AMGLPELRQAIADFYHERHDLDIDPKRICVTAGGSAALLLATALTVDPGDDVIVADPSYPCNRELVRSFEGQVIDVPTSA
ATRFHLTADLCSQYWTSKTKAVMITSPSNPTGTTIDFTVLDEVCKLAASRGAWRIVDETYLDLADREPDGTEVKSVLACD
PGAIVCNSFSKFFGMTGWRLGWAILPDDPTVLEAVDDLATNYYLCAHTPTQHAALACFMPESLAECEARRQELLARRRIV
IDGLKRIGLPVEVEPNGAFYAYFNISRTGLDAWTFCERVLDEAHVALTPGRDFGAATADTHVRLSYAASREALTEGLERL
GTFVESL

Sequences:

>Translated_407_residues
MENEAAQQPQSPAASPVMSRRAREANPFRAMVFGEQADKMLAQGISVIKLSLGEPDFGAPPAVRDAMREQYDGRALPYTA
AMGLPELRQAIADFYHERHDLDIDPKRICVTAGGSAALLLATALTVDPGDDVIVADPSYPCNRELVRSFEGQVIDVPTSA
ATRFHLTADLCSQYWTSKTKAVMITSPSNPTGTTIDFTVLDEVCKLAASRGAWRIVDETYLDLADREPDGTEVKSVLACD
PGAIVCNSFSKFFGMTGWRLGWAILPDDPTVLEAVDDLATNYYLCAHTPTQHAALACFMPESLAECEARRQELLARRRIV
IDGLKRIGLPVEVEPNGAFYAYFNISRTGLDAWTFCERVLDEAHVALTPGRDFGAATADTHVRLSYAASREALTEGLERL
GTFVESL
>Mature_407_residues
MENEAAQQPQSPAASPVMSRRAREANPFRAMVFGEQADKMLAQGISVIKLSLGEPDFGAPPAVRDAMREQYDGRALPYTA
AMGLPELRQAIADFYHERHDLDIDPKRICVTAGGSAALLLATALTVDPGDDVIVADPSYPCNRELVRSFEGQVIDVPTSA
ATRFHLTADLCSQYWTSKTKAVMITSPSNPTGTTIDFTVLDEVCKLAASRGAWRIVDETYLDLADREPDGTEVKSVLACD
PGAIVCNSFSKFFGMTGWRLGWAILPDDPTVLEAVDDLATNYYLCAHTPTQHAALACFMPESLAECEARRQELLARRRIV
IDGLKRIGLPVEVEPNGAFYAYFNISRTGLDAWTFCERVLDEAHVALTPGRDFGAATADTHVRLSYAASREALTEGLERL
GTFVESL

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=338, Percent_Identity=27.810650887574, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI169881279, Length=338, Percent_Identity=27.810650887574, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI56713256, Length=324, Percent_Identity=26.2345679012346, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI56713254, Length=324, Percent_Identity=26.2345679012346, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI4507369, Length=250, Percent_Identity=26.8, Blast_Score=86, Evalue=5e-17,
Organism=Escherichia coli, GI1788722, Length=382, Percent_Identity=28.7958115183246, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1786816, Length=371, Percent_Identity=27.7628032345013, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1788627, Length=387, Percent_Identity=25.5813953488372, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1787710, Length=298, Percent_Identity=26.510067114094, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1790797, Length=356, Percent_Identity=24.7191011235955, Blast_Score=65, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17567663, Length=378, Percent_Identity=26.4550264550265, Blast_Score=101, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI71994476, Length=403, Percent_Identity=27.2952853598015, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71994472, Length=403, Percent_Identity=27.0471464019851, Blast_Score=98, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17567369, Length=315, Percent_Identity=23.4920634920635, Blast_Score=86, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6322401, Length=352, Percent_Identity=24.4318181818182, Blast_Score=83, Evalue=8e-17,
Organism=Drosophila melanogaster, GI18859735, Length=376, Percent_Identity=23.6702127659574, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI28573069, Length=327, Percent_Identity=26.2996941896024, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24646114, Length=327, Percent_Identity=26.2996941896024, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI28573067, Length=327, Percent_Identity=26.2996941896024, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI28573065, Length=327, Percent_Identity=26.2996941896024, Blast_Score=75, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 44442; Mature: 44442

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENEAAQQPQSPAASPVMSRRAREANPFRAMVFGEQADKMLAQGISVIKLSLGEPDFGAP
CCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHCCCEEEEEECCCCCCCCC
PAVRDAMREQYDGRALPYTAAMGLPELRQAIADFYHERHDLDIDPKRICVTAGGSAALLL
HHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEE
ATALTVDPGDDVIVADPSYPCNRELVRSFEGQVIDVPTSAATRFHLTADLCSQYWTSKTK
EEHEEECCCCCEEEECCCCCCCHHHHHHHCCCEEECCCCCCEEEEEHHHHHHHHHCCCCC
AVMITSPSNPTGTTIDFTVLDEVCKLAASRGAWRIVDETYLDLADREPDGTEVKSVLACD
EEEEECCCCCCCCEEEHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCHHHHHHHCCC
PGAIVCNSFSKFFGMTGWRLGWAILPDDPTVLEAVDDLATNYYLCAHTPTQHAALACFMP
CCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCEEEEECCCCCHHEEEEECC
ESLAECEARRQELLARRRIVIDGLKRIGLPVEVEPNGAFYAYFNISRTGLDAWTFCERVL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEECCCCCHHHHHHHHHH
DEAHVALTPGRDFGAATADTHVRLSYAASREALTEGLERLGTFVESL
CCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MENEAAQQPQSPAASPVMSRRAREANPFRAMVFGEQADKMLAQGISVIKLSLGEPDFGAP
CCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHCCCEEEEEECCCCCCCCC
PAVRDAMREQYDGRALPYTAAMGLPELRQAIADFYHERHDLDIDPKRICVTAGGSAALLL
HHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEE
ATALTVDPGDDVIVADPSYPCNRELVRSFEGQVIDVPTSAATRFHLTADLCSQYWTSKTK
EEHEEECCCCCEEEECCCCCCCHHHHHHHCCCEEECCCCCCEEEEEHHHHHHHHHCCCCC
AVMITSPSNPTGTTIDFTVLDEVCKLAASRGAWRIVDETYLDLADREPDGTEVKSVLACD
EEEEECCCCCCCCEEEHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCHHHHHHHCCC
PGAIVCNSFSKFFGMTGWRLGWAILPDDPTVLEAVDDLATNYYLCAHTPTQHAALACFMP
CCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCEEEEECCCCCHHEEEEECC
ESLAECEARRQELLARRRIVIDGLKRIGLPVEVEPNGAFYAYFNISRTGLDAWTFCERVL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEECCCCCHHHHHHHHHH
DEAHVALTPGRDFGAATADTHVRLSYAASREALTEGLERLGTFVESL
CCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]