| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691506
Identifier: 213691506
GI number: 213691506
Start: 687510
End: 687938
Strand: Direct
Name: 213691506
Synonym: Blon_0606
Alternate gene names: NA
Gene position: 687510-687938 (Clockwise)
Preceding gene: 213691504
Following gene: 213691507
Centisome position: 24.27
GC content: 50.58
Gene sequence:
>429_bases ATGAGTGAAGATAAGCAGTATGACTTCTATGTGGCCGGTCCGTTCTTCGATCCTGAACAGACGGCAAGTATGGAACGTTT GGAAAAGATACTGGAAGACCATGGCAAGGTACTGTTCAAGCCGCGGTTTGCCAGCCAGATCGAAGAAGCAGGGCCTGAAG GATGCTTTGCGGACGATATCCGTGGCATTAATGCTGCTAAGGCCGTGGTCGCCAATCTTATGGACGAGGACCCAGGCACG ATGTTCGAAATCGGATATGCGCATGCGCTGGGAATCCCGGTGTACGGCTATTTCGAGAACCTTACGCCAATGGATCGTGT CAATCTGATGATTGCGCAATCGGTCGAACTGGTTTTCGCCGGTCCTGATGATGTGGCGAAATACTTGGAAACCGGCGAAC ATACGGAAGTCGATTACATTCAGTTCTAA
Upstream 100 bases:
>100_bases ATTGACGGTTATCTCGTAGTAATATTCACAATACGACCCCTTGTCCATAAAGTGAAAATAACGGCTGGTGTTCGACGTGT CTGCGCTATGACTAGAAACC
Downstream 100 bases:
>100_bases ACAGCTCTAACAGGTTCTCTGCAAGCAGGGTTGGCGGCGTTCTCGTACATTGTCATGTACGAGAACGCCGCAGTGGTATA GGGATATTCCAACAAGCGGC
Product: nucleoside 2-deoxyribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSEDKQYDFYVAGPFFDPEQTASMERLEKILEDHGKVLFKPRFASQIEEAGPEGCFADDIRGINAAKAVVANLMDEDPGT MFEIGYAHALGIPVYGYFENLTPMDRVNLMIAQSVELVFAGPDDVAKYLETGEHTEVDYIQF
Sequences:
>Translated_142_residues MSEDKQYDFYVAGPFFDPEQTASMERLEKILEDHGKVLFKPRFASQIEEAGPEGCFADDIRGINAAKAVVANLMDEDPGT MFEIGYAHALGIPVYGYFENLTPMDRVNLMIAQSVELVFAGPDDVAKYLETGEHTEVDYIQF >Mature_141_residues SEDKQYDFYVAGPFFDPEQTASMERLEKILEDHGKVLFKPRFASQIEEAGPEGCFADDIRGINAAKAVVANLMDEDPGTM FEIGYAHALGIPVYGYFENLTPMDRVNLMIAQSVELVFAGPDDVAKYLETGEHTEVDYIQF
Specific function: Unknown
COG id: COG3613
COG function: function code F; Nucleoside 2-deoxyribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15911; Mature: 15780
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDKQYDFYVAGPFFDPEQTASMERLEKILEDHGKVLFKPRFASQIEEAGPEGCFADDI CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCCCCHHHH RGINAAKAVVANLMDEDPGTMFEIGYAHALGIPVYGYFENLTPMDRVNLMIAQSVELVFA CCCHHHHHHHHHHHCCCCCCEEEECHHHHHCCCCEEHHCCCCCHHHHHHHEECCEEEEEE GPDDVAKYLETGEHTEVDYIQF CHHHHHHHHHCCCCCCCEEEEC >Mature Secondary Structure SEDKQYDFYVAGPFFDPEQTASMERLEKILEDHGKVLFKPRFASQIEEAGPEGCFADDI CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCCCCHHHH RGINAAKAVVANLMDEDPGTMFEIGYAHALGIPVYGYFENLTPMDRVNLMIAQSVELVFA CCCHHHHHHHHHHHCCCCCCEEEECHHHHHCCCCEEHHCCCCCHHHHHHHEECCEEEEEE GPDDVAKYLETGEHTEVDYIQF CHHHHHHHHHCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA