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The map label for this gene is 213691489

Identifier: 213691489

GI number: 213691489

Start: 662098

End: 663516

Strand: Direct

Name: 213691489

Synonym: Blon_0586

Alternate gene names: NA

Gene position: 662098-663516 (Clockwise)

Preceding gene: 213691488

Following gene: 213691491

Centisome position: 23.37

GC content: 62.44

Gene sequence:

>1419_bases
ATGCGCCAAACCGAAGCCTTGGCCGTTCTGAACGCCGGCGCGAACGTGTTCCTGACCGGTGCGCCCGGTGCCGGTAAGAC
CTATGTCTTGAACGAGTTCATCCGCCAGGCTCGGGCCGACGGCGCCAGTGTGGCAGTCACCGCGTCCACAGGCATCGCCT
CCACGCATATCAACGGCCAAACCATCCATTCGTGGAGTGGCGTCGGCGTGGCCACCGCCCTGAGCCCGAGTCTGCTCAAA
CTCATCAAATCCCGGCGCAAACGCAAGATTCAGGCTACGGACATCCTCGTCATCGACGAGGTTTCCATGCTGCACGCATG
GCTGTTCGACATGGTCGACCAAGTCTGCCGCGAAGTGCGTCGCGACCCACGCCCGTTCGGAGGCATCCAGGTCGTGCTGT
CCGGCGACTTCTTCCAACTGCCGCCGGTTTCGGTGTCCGGGCGCAACCGCGACCTCATCGCCCCCACCCCCGAATTCATC
GCCAGCCGCGAACGGTATGCCCGTGCCGGGCTTAACCCGGAAGGTTTCATCACCGAATCATTGGTATGGCCTGAACTTAA
CCCGGTAATCTGCTATCTGACCGAACAGCACCGTCAGGACACCGGCGAACTGCTGACCGTGCTCACCGACATTCGCGAAG
GCGACGTGACCCAGTCCGACCGTGACGTGCTCGTCACCCGTCTGGGCAAACTGCCCGAGCCCGGCCAGGTCGCCGTCCAC
CTATTCCCGGTGAACCGGCAGGCCGACAATCTCAACGACATGCGCCTGAACCAGATCATGCTTGAGCCGCACGAGTTCCA
CGCCGAAACCGCGGGTCCCGCCAATCTGGTCGACCGGCTCAAGAAGAACATGCTGGCCCCCGAGCGACTGGTACTCAAGG
AGGGCGCGGCTGTCATGGCCCTGCGCAACGACACCGATCGCCAGTACGTCAACGGCTCGCTCGGCACCGTGCGCGGCTTC
GCGCAGGAGAACAAGGGCGGCTGGCCGATCGTGGAATTCGAAAACGGCAACATCGTCACCATGAAACAGGCCACATGGGA
AATGATGGACGGCGACACCGTGCTCGCCTCCGTCTCTCAAGTGCCACTGCGTTGCGCGTGGGGCATTACCATCCACAAAT
CGCAAGGCATGACGCTCGACCGTGCGGTTATGGACCTGAAGCGCACCTTCGCGCCGGGCATGGGATATGTGGCGCTGTCA
CGAGTCGAATCGCTGGGTGGACTGTATTTGGCTGGCGTCAACGAACGCATGTTCCTCGTCTCGCCCGATGCCGTGGTGCT
CGACGGCGACCTGCGCGAAGCCTCGGCCTCGGCCTCCGACCAGTTGGCCGATGAAGGTGCAACCGCGTTCAAACCTGCTG
AGCCGGACGAATTTGGTGCCAATCCCGATGATGACTTCGCCCAGGACGCGTTATTTTGA

Upstream 100 bases:

>100_bases
CTCCAAGGCCATCGCCGCCGACATCGTCTCGACCAGCATCCTCAATAAGTAGTCCGCCGTACTTGGCTCCCCTCCCTGAG
GGGAGTCTAGAGAGGTTGAT

Downstream 100 bases:

>100_bases
CGGTCGATATATCGAGCGACCGCTAATTTGAGTGTTTCTGCACTTCGAGGGGCGGATTTTGAGTTTTCGGGACATCTACT
TCCGTTTCAAGGGGCTGATG

Product: AAA ATPase

Products: NA

Alternate protein names: Helicase; TPR Domain Protein; TPR Domain-Containing Protein; ATPase; Exonuclease V Subunit Alpha; Helicase-Related Protein; 5-3' DNA Helicase; Aaa ATPase; Glycosysltransferase; Hrdc Domain Protein; HRDC Domain Protein; Helicase-Family Protein; RecD-Like Exodeoxyribonuclease V Alpha Chain; RRM3/PIF1 Helicase-Like Protein; Helicase Protein; ATP-Dependent ExoDNAse Alpha Subunit; DNA Helicase AAA ATPase; DNA Helicase/AAA ATPase

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MRQTEALAVLNAGANVFLTGAPGAGKTYVLNEFIRQARADGASVAVTASTGIASTHINGQTIHSWSGVGVATALSPSLLK
LIKSRRKRKIQATDILVIDEVSMLHAWLFDMVDQVCREVRRDPRPFGGIQVVLSGDFFQLPPVSVSGRNRDLIAPTPEFI
ASRERYARAGLNPEGFITESLVWPELNPVICYLTEQHRQDTGELLTVLTDIREGDVTQSDRDVLVTRLGKLPEPGQVAVH
LFPVNRQADNLNDMRLNQIMLEPHEFHAETAGPANLVDRLKKNMLAPERLVLKEGAAVMALRNDTDRQYVNGSLGTVRGF
AQENKGGWPIVEFENGNIVTMKQATWEMMDGDTVLASVSQVPLRCAWGITIHKSQGMTLDRAVMDLKRTFAPGMGYVALS
RVESLGGLYLAGVNERMFLVSPDAVVLDGDLREASASASDQLADEGATAFKPAEPDEFGANPDDDFAQDALF

Sequences:

>Translated_472_residues
MRQTEALAVLNAGANVFLTGAPGAGKTYVLNEFIRQARADGASVAVTASTGIASTHINGQTIHSWSGVGVATALSPSLLK
LIKSRRKRKIQATDILVIDEVSMLHAWLFDMVDQVCREVRRDPRPFGGIQVVLSGDFFQLPPVSVSGRNRDLIAPTPEFI
ASRERYARAGLNPEGFITESLVWPELNPVICYLTEQHRQDTGELLTVLTDIREGDVTQSDRDVLVTRLGKLPEPGQVAVH
LFPVNRQADNLNDMRLNQIMLEPHEFHAETAGPANLVDRLKKNMLAPERLVLKEGAAVMALRNDTDRQYVNGSLGTVRGF
AQENKGGWPIVEFENGNIVTMKQATWEMMDGDTVLASVSQVPLRCAWGITIHKSQGMTLDRAVMDLKRTFAPGMGYVALS
RVESLGGLYLAGVNERMFLVSPDAVVLDGDLREASASASDQLADEGATAFKPAEPDEFGANPDDDFAQDALF
>Mature_472_residues
MRQTEALAVLNAGANVFLTGAPGAGKTYVLNEFIRQARADGASVAVTASTGIASTHINGQTIHSWSGVGVATALSPSLLK
LIKSRRKRKIQATDILVIDEVSMLHAWLFDMVDQVCREVRRDPRPFGGIQVVLSGDFFQLPPVSVSGRNRDLIAPTPEFI
ASRERYARAGLNPEGFITESLVWPELNPVICYLTEQHRQDTGELLTVLTDIREGDVTQSDRDVLVTRLGKLPEPGQVAVH
LFPVNRQADNLNDMRLNQIMLEPHEFHAETAGPANLVDRLKKNMLAPERLVLKEGAAVMALRNDTDRQYVNGSLGTVRGF
AQENKGGWPIVEFENGNIVTMKQATWEMMDGDTVLASVSQVPLRCAWGITIHKSQGMTLDRAVMDLKRTFAPGMGYVALS
RVESLGGLYLAGVNERMFLVSPDAVVLDGDLREASASASDQLADEGATAFKPAEPDEFGANPDDDFAQDALF

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI82546872, Length=410, Percent_Identity=35.3658536585366, Blast_Score=204, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI25143421, Length=417, Percent_Identity=31.4148681055156, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI17534623, Length=424, Percent_Identity=25.2358490566038, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17533663, Length=424, Percent_Identity=25.7075471698113, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17537113, Length=424, Percent_Identity=25.2358490566038, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17536913, Length=424, Percent_Identity=25, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17537851, Length=424, Percent_Identity=25, Blast_Score=93, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6321820, Length=322, Percent_Identity=33.2298136645963, Blast_Score=166, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6323579, Length=328, Percent_Identity=34.4512195121951, Blast_Score=162, Evalue=1e-40,
Organism=Drosophila melanogaster, GI19920652, Length=472, Percent_Identity=30.9322033898305, Blast_Score=206, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51505; Mature: 51505

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQTEALAVLNAGANVFLTGAPGAGKTYVLNEFIRQARADGASVAVTASTGIASTHINGQ
CCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCC
TIHSWSGVGVATALSPSLLKLIKSRRKRKIQATDILVIDEVSMLHAWLFDMVDQVCREVR
EEECCCCCCHHHHCCHHHHHHHHHHHHCEEECCEEEEECHHHHHHHHHHHHHHHHHHHHH
RDPRPFGGIQVVLSGDFFQLPPVSVSGRNRDLIAPTPEFIASRERYARAGLNPEGFITES
HCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEECC
LVWPELNPVICYLTEQHRQDTGELLTVLTDIREGDVTQSDRDVLVTRLGKLPEPGQVAVH
EECCCCCCEEEEEEHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEE
LFPVNRQADNLNDMRLNQIMLEPHEFHAETAGPANLVDRLKKNMLAPERLVLKEGAAVMA
EEECCCCCCCCCCHHHHHEEECHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCEEEE
LRNDTDRQYVNGSLGTVRGFAQENKGGWPIVEFENGNIVTMKQATWEMMDGDTVLASVSQ
EECCCCCHHCCCCCHHHHHHHHCCCCCCCEEEECCCCEEEEECCHHHHCCCCHHHHHHHC
VPLRCAWGITIHKSQGMTLDRAVMDLKRTFAPGMGYVALSRVESLGGLYLAGVNERMFLV
CCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCEEEEE
SPDAVVLDGDLREASASASDQLADEGATAFKPAEPDEFGANPDDDFAQDALF
CCCCEEEECCCHHHCCCCHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHCCC
>Mature Secondary Structure
MRQTEALAVLNAGANVFLTGAPGAGKTYVLNEFIRQARADGASVAVTASTGIASTHINGQ
CCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCC
TIHSWSGVGVATALSPSLLKLIKSRRKRKIQATDILVIDEVSMLHAWLFDMVDQVCREVR
EEECCCCCCHHHHCCHHHHHHHHHHHHCEEECCEEEEECHHHHHHHHHHHHHHHHHHHHH
RDPRPFGGIQVVLSGDFFQLPPVSVSGRNRDLIAPTPEFIASRERYARAGLNPEGFITES
HCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEECC
LVWPELNPVICYLTEQHRQDTGELLTVLTDIREGDVTQSDRDVLVTRLGKLPEPGQVAVH
EECCCCCCEEEEEEHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEE
LFPVNRQADNLNDMRLNQIMLEPHEFHAETAGPANLVDRLKKNMLAPERLVLKEGAAVMA
EEECCCCCCCCCCHHHHHEEECHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCEEEE
LRNDTDRQYVNGSLGTVRGFAQENKGGWPIVEFENGNIVTMKQATWEMMDGDTVLASVSQ
EECCCCCHHCCCCCHHHHHHHHCCCCCCCEEEECCCCEEEEECCHHHHCCCCHHHHHHHC
VPLRCAWGITIHKSQGMTLDRAVMDLKRTFAPGMGYVALSRVESLGGLYLAGVNERMFLV
CCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCEEEEE
SPDAVVLDGDLREASASASDQLADEGATAFKPAEPDEFGANPDDDFAQDALF
CCCCEEEECCCHHHCCCCHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA