Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is yhjE [H]

Identifier: 213691276

GI number: 213691276

Start: 417749

End: 419113

Strand: Direct

Name: yhjE [H]

Synonym: Blon_0360

Alternate gene names: 213691276

Gene position: 417749-419113 (Clockwise)

Preceding gene: 213691275

Following gene: 213691277

Centisome position: 14.75

GC content: 63.59

Gene sequence:

>1365_bases
ATGCGCACGCCGCACCGGGGTTTATCCGCAAGAGGAGAAAGAAGAAGGACAATGTCTGCAAGCGCATCCGCGACTGTGGC
CAAACCGGTGAAGAAGGATTCCGTTCCCGAGATCATCGCCGCCTCGATGGTGGGCACCGCCATCGAATTCTACGACAACT
ACTGCTATTCCATCGCAGCCGCCAGCTATTTCGGCGCGATTTTCTTCACGGACGTCGCCAAGTCCAACCAGGCCCTGGCC
ACGCTGATGGCTTTCGTGACCTTCGCCGTATCGTTCCTCGCCCGCCCGTTCGGTTCCATGTTGTTCGGCCACTTCGGCGA
CAAGCTCGGCCGCAAGAAGACGCTGGTCATCGCCCTGATGACCATGGGCATCGCCACCTTCCTGGTCGGATGCCTGCCCG
GCTATGAGCAGATCGGCGCATGGTCCATCGTGATCCTGTGCATCTGCCGCGCCTGCCAGGGCGTGGGGCTCGCCGGTGAA
TGGTCCGGCGCGGCCTTGGTCGCCACCGAGAACGCCCCGGCCGACAAGCGCGCCCTGTATGGCTCCTTCCCGAACCTGGG
CGCCCCGATCGGCTTCTTCTGCGCCTATGGTCTGAACCTGGTGCTTGAGGCCAACCTGAGCCAGGAGCAGATGCTCGCCT
TCGGCTGGCGCATCCCCTTCCTGTGCTCCGCCGTGCTGGTGGCCATCGGCCTGTACGTGCGTGCCCGCATGTCCGAGACC
CCGGTGTTCAAGAAGGCCTCCGAGGAGAAGCGCACCTCCAAGCACCCGCTGCGTGACCTGCTGCCGTACTGGAAGGAGGT
CCTGCTCGGCACCGTGGCCATGGGCATCACCTACACCCTGTTCTACGTGCTCGGCACCTGGTCGTTGGCCTACGGCGTCA
AGGGCCTGAAGTTCACCCAAAGCGAGTACCTGCTTATGCAGATGTGCTCCGTGGTGTTCTTCGCCATCTTCATCGTGGTC
TCGTGCGTGTATGCCGACAAGGTGGGTCGCAAGAAGGTCATGATCACCGTGACCGCCGCCGCCTTGGTGTTCAGCTTCTT
CGTGCCGATACTGCTGGTGCACTCCGTCTCCCACATCATGATCTTCCTGTGCGTCGGCTTCGTGATCATGGGCGGCCTGT
TCGGCCCCTGCGGCGCGTACCTGCCCGAGCTGTTCCCGGTGCACGTGCGCTACTCCGGCGCCGGCCTGAGCTACAACCTC
GCCGCCATCTTCGGCGGCGCGTTCGCCCCGACCATCGCCCAGGCGCTGGTCTCCTCCGAGTTCGGCGTGGCCGGCGTGGG
CTGGTACATGGCCATCATGGCCGCGCTCGCCCTGCTCGCCCTGTTCCTGATCAAGGAAAGCAAGGACAAGGACTACGAGC
TCTGA

Upstream 100 bases:

>100_bases
GGCGATGTGCGGGAGCTCATCGCTGGGGCCACAAGCCGTGCCAGTCCTTCTCCCGTATCCCGGTCGCTGTGCTTGATTCG
TCCGTCATCGCGAACACGTG

Downstream 100 bases:

>100_bases
TCCCCGCCCGTCCGCGGCGGTCCGCGACAGGGGGCATCGCCCGGCAAGGGCGGTGCCCCTTTCGTATGCCGGCCGATAAG
ATGAACAGTAGGCGAACTTA

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MRTPHRGLSARGERRRTMSASASATVAKPVKKDSVPEIIAASMVGTAIEFYDNYCYSIAAASYFGAIFFTDVAKSNQALA
TLMAFVTFAVSFLARPFGSMLFGHFGDKLGRKKTLVIALMTMGIATFLVGCLPGYEQIGAWSIVILCICRACQGVGLAGE
WSGAALVATENAPADKRALYGSFPNLGAPIGFFCAYGLNLVLEANLSQEQMLAFGWRIPFLCSAVLVAIGLYVRARMSET
PVFKKASEEKRTSKHPLRDLLPYWKEVLLGTVAMGITYTLFYVLGTWSLAYGVKGLKFTQSEYLLMQMCSVVFFAIFIVV
SCVYADKVGRKKVMITVTAAALVFSFFVPILLVHSVSHIMIFLCVGFVIMGGLFGPCGAYLPELFPVHVRYSGAGLSYNL
AAIFGGAFAPTIAQALVSSEFGVAGVGWYMAIMAALALLALFLIKESKDKDYEL

Sequences:

>Translated_454_residues
MRTPHRGLSARGERRRTMSASASATVAKPVKKDSVPEIIAASMVGTAIEFYDNYCYSIAAASYFGAIFFTDVAKSNQALA
TLMAFVTFAVSFLARPFGSMLFGHFGDKLGRKKTLVIALMTMGIATFLVGCLPGYEQIGAWSIVILCICRACQGVGLAGE
WSGAALVATENAPADKRALYGSFPNLGAPIGFFCAYGLNLVLEANLSQEQMLAFGWRIPFLCSAVLVAIGLYVRARMSET
PVFKKASEEKRTSKHPLRDLLPYWKEVLLGTVAMGITYTLFYVLGTWSLAYGVKGLKFTQSEYLLMQMCSVVFFAIFIVV
SCVYADKVGRKKVMITVTAAALVFSFFVPILLVHSVSHIMIFLCVGFVIMGGLFGPCGAYLPELFPVHVRYSGAGLSYNL
AAIFGGAFAPTIAQALVSSEFGVAGVGWYMAIMAALALLALFLIKESKDKDYEL
>Mature_454_residues
MRTPHRGLSARGERRRTMSASASATVAKPVKKDSVPEIIAASMVGTAIEFYDNYCYSIAAASYFGAIFFTDVAKSNQALA
TLMAFVTFAVSFLARPFGSMLFGHFGDKLGRKKTLVIALMTMGIATFLVGCLPGYEQIGAWSIVILCICRACQGVGLAGE
WSGAALVATENAPADKRALYGSFPNLGAPIGFFCAYGLNLVLEANLSQEQMLAFGWRIPFLCSAVLVAIGLYVRARMSET
PVFKKASEEKRTSKHPLRDLLPYWKEVLLGTVAMGITYTLFYVLGTWSLAYGVKGLKFTQSEYLLMQMCSVVFFAIFIVV
SCVYADKVGRKKVMITVTAAALVFSFFVPILLVHSVSHIMIFLCVGFVIMGGLFGPCGAYLPELFPVHVRYSGAGLSYNL
AAIFGGAFAPTIAQALVSSEFGVAGVGWYMAIMAALALLALFLIKESKDKDYEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789941, Length=426, Percent_Identity=47.4178403755869, Blast_Score=333, Evalue=1e-92,
Organism=Escherichia coli, GI1788292, Length=394, Percent_Identity=34.2639593908629, Blast_Score=212, Evalue=3e-56,
Organism=Escherichia coli, GI1790550, Length=428, Percent_Identity=30.3738317757009, Blast_Score=201, Evalue=8e-53,
Organism=Escherichia coli, GI1788942, Length=443, Percent_Identity=30.2483069977427, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI87082404, Length=396, Percent_Identity=24.7474747474747, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87082231, Length=196, Percent_Identity=24.4897959183673, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004736
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005828
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 49126; Mature: 49126

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS00359 RIBOSOMAL_L11 ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPHRGLSARGERRRTMSASASATVAKPVKKDSVPEIIAASMVGTAIEFYDNYCYSIAA
CCCCCCCCCCCCHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASYFGAIFFTDVAKSNQALATLMAFVTFAVSFLARPFGSMLFGHFGDKLGRKKTLVIALM
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
TMGIATFLVGCLPGYEQIGAWSIVILCICRACQGVGLAGEWSGAALVATENAPADKRALY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHC
GSFPNLGAPIGFFCAYGLNLVLEANLSQEQMLAFGWRIPFLCSAVLVAIGLYVRARMSET
CCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
PVFKKASEEKRTSKHPLRDLLPYWKEVLLGTVAMGITYTLFYVLGTWSLAYGVKGLKFTQ
CCHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECH
SEYLLMQMCSVVFFAIFIVVSCVYADKVGRKKVMITVTAAALVFSFFVPILLVHSVSHIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
IFLCVGFVIMGGLFGPCGAYLPELFPVHVRYSGAGLSYNLAAIFGGAFAPTIAQALVSSE
HHHHHHHHHHCCCCCHHHHHHHHHCEEEEEEECCCCCEEHHHHHCCHHHHHHHHHHHHCC
FGVAGVGWYMAIMAALALLALFLIKESKDKDYEL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRTPHRGLSARGERRRTMSASASATVAKPVKKDSVPEIIAASMVGTAIEFYDNYCYSIAA
CCCCCCCCCCCCHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASYFGAIFFTDVAKSNQALATLMAFVTFAVSFLARPFGSMLFGHFGDKLGRKKTLVIALM
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
TMGIATFLVGCLPGYEQIGAWSIVILCICRACQGVGLAGEWSGAALVATENAPADKRALY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHC
GSFPNLGAPIGFFCAYGLNLVLEANLSQEQMLAFGWRIPFLCSAVLVAIGLYVRARMSET
CCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
PVFKKASEEKRTSKHPLRDLLPYWKEVLLGTVAMGITYTLFYVLGTWSLAYGVKGLKFTQ
CCHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECH
SEYLLMQMCSVVFFAIFIVVSCVYADKVGRKKVMITVTAAALVFSFFVPILLVHSVSHIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
IFLCVGFVIMGGLFGPCGAYLPELFPVHVRYSGAGLSYNLAAIFGGAFAPTIAQALVSSE
HHHHHHHHHHCCCCCHHHHHHHHHCEEEEEEECCCCCEEHHHHHCCHHHHHHHHHHHHCC
FGVAGVGWYMAIMAALALLALFLIKESKDKDYEL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]