| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is senX3 [H]
Identifier: 213691277
GI number: 213691277
Start: 419262
End: 420641
Strand: Direct
Name: senX3 [H]
Synonym: Blon_0361
Alternate gene names: 213691277
Gene position: 419262-420641 (Clockwise)
Preceding gene: 213691276
Following gene: 213691278
Centisome position: 14.8
GC content: 67.03
Gene sequence:
>1380_bases ATGGATATCTCGCAGATCGTCGTGGCCGTGGTGCTCGCCGTGCTGGCGGTGGCATGGGTCGCCGTCATCGCCTACAACAA GGGCCGGGTTTCGGGTCGCCTTGCCGCCGAACAGGACCTGTCCGGCGATGAGGACGCGCGTTCCCTGTTCGGCGTCGACG TGCCCGTGCGCCCCACCGAGCGGCGTCTGATCGAAGCGCTGCCCGAAGCCCTGATCGTCACCGATCGCAATGGTCTGGTC CAATACGCAAGCCCCGGTTCGGTGCCGTTCGCCCTGGTGTCCGGGGGGCGGCTCAACTCGCGTGAGATCGAGGACATTCT CACCCAGGTCGCCAACGATGGCGGTGTGCGCGAGCGCGAGGTCCGGCTGCCGGTCAACCACGGCGCCTATCCATCCTCGA ACGGCCGCGGGCTTGAGGCCGGTCAGTCGCGCCCGTCCAACACGATGTACCTGCGTGTGCGCATCGGCGACATCGGCGAC GACCTGTATGCCATCTTCATCAATGACATGTCCGAACAGCGTCGTTTCGAGGCCGTCCGCCGCGACTTCGTGACCAACGT CTCGCATGAACTCAAGACCCCGGCCGGCGCGATCTCGCTGCTCGCCGAAACCGTGACCGACGCGGCCGACGATCCGGACG CCGTGCGGTACTTCTCCGGCCGCATCTCCAAGGAATCCGCGCGCCTGACCGAGCTGGTGCATCATCTCATCGACCTGCAG AGGGCCCAGAGCCCGCAGGGCATGATCAACGCGCGGCGCATCTGCGCGCTGGATGTGGCCCGTGCCGCCATCGCCGACAA TCAGGTCCAAGCCGACTCGCGCCATGTGGACATCTGCCTGAGCGTCAACGGCAAGCCGGTGCCGACCAGGCTTGCGGACG ATGCCGTGGCCCCGCAGGTGGCGGCGCCCATGATCAAGGCCGATCGGGAGGCGATGCAGACCGCGGTCAAGAACCTCGTC GAAAACGCCATCCACTATTCGCCCGAGCACACCACGGTGGCCGTCGGCGTGGCGGAGCGCGACGGCAAGGTCACCATCCG TGTGGTCGATCAGGGCATCGGCATCCCCGCCAAGTCGCTGGACCGTATTTTCGAGCGGTTCTACCGGGTCGATCCGGCCC GTTCCCGTGAAACCGGAGGGTCGGGACTTGGTCTGGCCATCACCAAGCACTGCGTTCAGGAGAACGGCGGACGCATTTCG GTATGGTCGCGCAAGGGGGAGGGCTCCACGTTCACCATCGAACTGCCGGCCGCCGCGGATGAGGATGATGAATCAACGCA GGACGGGGACGGTGCGGACACGCCGAGCGCGGCGGTGACGGACGGTGCGCCGGATGGCGGCCATGGCGGCACGCCGAACG GCTCGGCGGCGCGGGAGTAG
Upstream 100 bases:
>100_bases GGCGGTGCCCCTTTCGTATGCCGGCCGATAAGATGAACAGTAGGCGAACTTACGTAGTCTATGCGGGGCACTACGCCTCG GGCGTTTTACTCTGGGAGTC
Downstream 100 bases:
>100_bases CGCCGGCGGCGCCGATGCGGCGTCGGCCGATCGCATGGCGGGCTGGTTTCGCCCGTGGCGTGTAGCCTCATTGAGCAATT ACGTACTTTCGGGAAACGGC
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MDISQIVVAVVLAVLAVAWVAVIAYNKGRVSGRLAAEQDLSGDEDARSLFGVDVPVRPTERRLIEALPEALIVTDRNGLV QYASPGSVPFALVSGGRLNSREIEDILTQVANDGGVREREVRLPVNHGAYPSSNGRGLEAGQSRPSNTMYLRVRIGDIGD DLYAIFINDMSEQRRFEAVRRDFVTNVSHELKTPAGAISLLAETVTDAADDPDAVRYFSGRISKESARLTELVHHLIDLQ RAQSPQGMINARRICALDVARAAIADNQVQADSRHVDICLSVNGKPVPTRLADDAVAPQVAAPMIKADREAMQTAVKNLV ENAIHYSPEHTTVAVGVAERDGKVTIRVVDQGIGIPAKSLDRIFERFYRVDPARSRETGGSGLGLAITKHCVQENGGRIS VWSRKGEGSTFTIELPAAADEDDESTQDGDGADTPSAAVTDGAPDGGHGGTPNGSAARE
Sequences:
>Translated_459_residues MDISQIVVAVVLAVLAVAWVAVIAYNKGRVSGRLAAEQDLSGDEDARSLFGVDVPVRPTERRLIEALPEALIVTDRNGLV QYASPGSVPFALVSGGRLNSREIEDILTQVANDGGVREREVRLPVNHGAYPSSNGRGLEAGQSRPSNTMYLRVRIGDIGD DLYAIFINDMSEQRRFEAVRRDFVTNVSHELKTPAGAISLLAETVTDAADDPDAVRYFSGRISKESARLTELVHHLIDLQ RAQSPQGMINARRICALDVARAAIADNQVQADSRHVDICLSVNGKPVPTRLADDAVAPQVAAPMIKADREAMQTAVKNLV ENAIHYSPEHTTVAVGVAERDGKVTIRVVDQGIGIPAKSLDRIFERFYRVDPARSRETGGSGLGLAITKHCVQENGGRIS VWSRKGEGSTFTIELPAAADEDDESTQDGDGADTPSAAVTDGAPDGGHGGTPNGSAARE >Mature_459_residues MDISQIVVAVVLAVLAVAWVAVIAYNKGRVSGRLAAEQDLSGDEDARSLFGVDVPVRPTERRLIEALPEALIVTDRNGLV QYASPGSVPFALVSGGRLNSREIEDILTQVANDGGVREREVRLPVNHGAYPSSNGRGLEAGQSRPSNTMYLRVRIGDIGD DLYAIFINDMSEQRRFEAVRRDFVTNVSHELKTPAGAISLLAETVTDAADDPDAVRYFSGRISKESARLTELVHHLIDLQ RAQSPQGMINARRICALDVARAAIADNQVQADSRHVDICLSVNGKPVPTRLADDAVAPQVAAPMIKADREAMQTAVKNLV ENAIHYSPEHTTVAVGVAERDGKVTIRVVDQGIGIPAKSLDRIFERFYRVDPARSRETGGSGLGLAITKHCVQENGGRIS VWSRKGEGSTFTIELPAAADEDDESTQDGDGADTPSAAVTDGAPDGGHGGTPNGSAARE
Specific function: Part of the two-component regulatory system senX3/regX3. Phosphorylates regX3 under conditions of phosphate limitation. Probably does not itself sense phosphate concentrations, which may be relayed to senX3 by the pstSCAB phosphate transporter system [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=288, Percent_Identity=28.4722222222222, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1788393, Length=255, Percent_Identity=29.4117647058824, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1790346, Length=243, Percent_Identity=28.8065843621399, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI48994928, Length=277, Percent_Identity=28.158844765343, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1790436, Length=238, Percent_Identity=28.5714285714286, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI145693157, Length=238, Percent_Identity=29.4117647058824, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87082128, Length=247, Percent_Identity=26.7206477732794, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1786783, Length=236, Percent_Identity=27.9661016949153, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1790861, Length=222, Percent_Identity=29.2792792792793, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1789149, Length=257, Percent_Identity=26.8482490272374, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1787894, Length=239, Percent_Identity=26.7782426778243, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1786912, Length=261, Percent_Identity=26.4367816091954, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1788549, Length=253, Percent_Identity=26.0869565217391, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788713, Length=248, Percent_Identity=24.1935483870968, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1789403, Length=219, Percent_Identity=26.9406392694064, Blast_Score=65, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49076; Mature: 49076
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDISQIVVAVVLAVLAVAWVAVIAYNKGRVSGRLAAEQDLSGDEDARSLFGVDVPVRPTE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHCCCCCCCCHH RRLIEALPEALIVTDRNGLVQYASPGSVPFALVSGGRLNSREIEDILTQVANDGGVRERE HHHHHHCCCEEEEECCCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEE VRLPVNHGAYPSSNGRGLEAGQSRPSNTMYLRVRIGDIGDDLYAIFINDMSEQRRFEAVR EEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCHHHHHHHHHHH RDFVTNVSHELKTPAGAISLLAETVTDAADDPDAVRYFSGRISKESARLTELVHHLIDLQ HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH RAQSPQGMINARRICALDVARAAIADNQVQADSRHVDICLSVNGKPVPTRLADDAVAPQV HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHCCHHCCCHH AAPMIKADREAMQTAVKNLVENAIHYSPEHTTVAVGVAERDGKVTIRVVDQGIGIPAKSL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCHHHH DRIFERFYRVDPARSRETGGSGLGLAITKHCVQENGGRISVWSRKGEGSTFTIELPAAAD HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCC EDDESTQDGDGADTPSAAVTDGAPDGGHGGTPNGSAARE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDISQIVVAVVLAVLAVAWVAVIAYNKGRVSGRLAAEQDLSGDEDARSLFGVDVPVRPTE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHCCCCCCCCHH RRLIEALPEALIVTDRNGLVQYASPGSVPFALVSGGRLNSREIEDILTQVANDGGVRERE HHHHHHCCCEEEEECCCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEE VRLPVNHGAYPSSNGRGLEAGQSRPSNTMYLRVRIGDIGDDLYAIFINDMSEQRRFEAVR EEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCHHHHHHHHHHH RDFVTNVSHELKTPAGAISLLAETVTDAADDPDAVRYFSGRISKESARLTELVHHLIDLQ HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH RAQSPQGMINARRICALDVARAAIADNQVQADSRHVDICLSVNGKPVPTRLADDAVAPQV HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHCCHHCCCHH AAPMIKADREAMQTAVKNLVENAIHYSPEHTTVAVGVAERDGKVTIRVVDQGIGIPAKSL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCHHHH DRIFERFYRVDPARSRETGGSGLGLAITKHCVQENGGRISVWSRKGEGSTFTIELPAAAD HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCC EDDESTQDGDGADTPSAAVTDGAPDGGHGGTPNGSAARE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA