| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is pip [H]
Identifier: 213691126
GI number: 213691126
Start: 245565
End: 248195
Strand: Reverse
Name: pip [H]
Synonym: Blon_0205
Alternate gene names: 213691126
Gene position: 248195-245565 (Counterclockwise)
Preceding gene: 213691129
Following gene: 213691125
Centisome position: 8.76
GC content: 60.62
Gene sequence:
>2631_bases GTGGGCAATATCTTCAAGGTCCTCAAACGCGACTTCCTGCGCCTGTTCAAGGTGCCGGCCGCATGGGTGATCCTGTTCGG CATGGTGTTCATCCCACCACTGTATTCGTGGTACAACATCGTCGGCTTCTGGGACCCGTACGGCAATACCAAAGGCATCA CCGTCGCCATCGCCAACAATGACGACGGCACCGACAACGCACTCATCGGCAAGCAAAACCTCGGCGATCAAATCGTCAAG CAGATGAAAAGCAACGACCAGCTCGGCTGGACCTTCGTCACCGAAGCCGAGGCCATGGACCAGGTGGAATCCGGCAAGGC ATACGCAGCCATCATCATCCCCAAAGACTTTTCCAACGATCTCGCCGGCGTGGTGACCGGCGGCAAGAGTCGGCCCACTC TGGAGTATTACGTCAACGAAAAAGCCAGCGCCATCGCCCCCAAAGTCACCGACGTCGGCGCGTCCACTGTGGACCGCACG GTCAATTCCACATTCGTCTCCACCGTATCCAAAGTACTTACCGAAGTCATCAATACGGTTGGCGACAAAGTCATCAGCAC CGAAGACACCACCAAAGCCAAGGCCCTCACGGCCCTTGCCGAGGCCTCCGGCGATGTGCAGCACACACGCAGCACCATCG CCAAACTCACCACCAAACTCACCGATACCCCAGAGCAGACACGCACCGCACGTCAGGCGCTGGACGACGCGCGCACACTT GGCATCGACACCGCGAAAGGCCTGGCCGGCGTCTCCACCCTGATCGGCACTACCCAGACCAGCCTGAACGGCTTCGTCAC CTCCACGTCCGAAGCGCTTGACCAAGGCTCAAGCCTGCTGAGCCAAGCCGCAGCGCAGGCCAACCAAAGCGTGGGCACGG TAGCCGGAACCATCAGCGCCGCCAATCAGCAGGTAGACGGACTGATCAATACGGCGGAAGACATCAACCAAGCGAACGCC GACATCATCGACCAACTCAAAGGGCTGCCGAACACCGATCGAGAACCGCTGCAATCCGCCATTGCCGCACTGGAAAGCCG CAATAGCGAGCTTGCCGGCGCACTGGGCAACCTCGATAGCCTGAACACCACTATCGGCAACGCCTCCACAGACACCGCCG GATTGGCGCAGCATCTCAATACCGCCACCCAAACCACGGTGCGCGAGGCCAATACCGCTCGCGGCACCATCATCTCCGGC ACCATTCCTCAGCTCAACACCGGCCTCAACACCCTCAGCTCGACCGCCAACACTCTGTCGACCGGCATCACGTCGCAAGG CTCACTCATCGATCAGTCGAAGCACACCCTCGACCAACTCGACAAAGCCGCCTCCACCACGGTGACCGCGCTACGCGACA CCGATAAGGCGCTGGCCGGCATGCAAACCAAGCTCGAAACGCTGGCCACCGACATCAAAACCCTGAGCGTCTCCAGTTCA CTCAGCTCCCTGATCGACACCGACGGCAAGCTGGATGCCGCCACAATCGCCGACTTCATGCTCTCCCCCAGTGTTATCAG CGAACGGGCCGTCTACCCAGTCGCCTCCTATGGTTCCGGCATGGCACCGCTGTTCACCACCCTGTCTTTGTGGGTGGGCG CGTTCGTGCTCGTGGTCATTCCCAAACTCGAAACCGACGACGAGGGCATCGACGATCTCACGCCCACTCAAGGCTATCTC GGCCGTTTCCTGTTGCTGGCCACGCTGGCCGCCGTCCAAGGCCTGGTCACAGCCATCGGCGATCTTGTCATCGGCATTCA ATGCGCGAGCGCCCCGGTGTTTCTGCTCACCTGCGTCATCACCTCACTGGTGTATATGTCGGTGATTTTCGCCCTCTCCA CCACGTTCATGCACGTGGGCAAAGGCGTGTGCGTGGCGCTGGTCATTCTGCAGGTGCCGGGCGCCTCCGGCCTGTACCCG ATTGAAATGATGCCCGCGTTCTTCCGCGCCATCTATCCGCTGCTGCCGTTCACCTATTCGATTGACGCAATGCGTGAAAC CATCGGCGGCTTCTACGACGGCCTCTGGTTCGCCTATATCGGCAAATTGCTGGTTTTCGCGGTTCTGGCCTTTGTGCTTG GCCTCGGCGCCCGGCCGAAACTGGCCAATCTCAACCGCCTGTTCGCGCGGGAAATCAAGGAAAGCGACATGATTATCGGC GAGCCGGTGCACCTGCCCGGCAGCGAATACCGTGTCACTCAGGCCATTGCGGCACTGGCCGACCGCGACGAATACCGTCA TGCCATCGAACGTCGGGCCGCCAAATTCGCCTACCAGTATCCCCGGCTGCTGCTGGGTGCGCTTATCGCCGGATTTGTGG TGCCGGCCGCGCTCATTATCGTGTTTGCGCTGACCACCAGCGAGAAAATCGTGGTCATGGGCACATGGCTGGCATGGGTG CTCATCATCATGGGCTTCCTGATGGTCGTGGAATTCATGCGCGATTCCATCCGCCGCCAAACCGAGCTCGGCAACCTCTC CGACGAGTCGATCCGCGCCATGCTGTACGGGCATAAGGCCAAGCGTCGCGACACCTCCGCCGAACGCCACGAAGAAGCGG ACCCGAGCGCCGCCGTTACCGCAATCATCCCCACTATTCCGCCGACCAAGGAAGGCAGGCACGCACGATGA
Upstream 100 bases:
>100_bases CATCAATCACCCCATTGATCTCCGGCAACCGTAGCGCTACGATTAACGTATCGCTACGGAAAACGTAGCAACCAAGCAAC ACCAAGCTCCGGAGGTATCA
Downstream 100 bases:
>100_bases ACACCATGTGGAAACTGTTTACCGGCGACATCAAACGCCTGACCAGCAACGTGGTCTCCATCATCATCGTGATCGGCTTG GTGATGATTCCCGGCCTGTT
Product: ABC-2 type transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 876; Mature: 875
Protein sequence:
>876_residues MGNIFKVLKRDFLRLFKVPAAWVILFGMVFIPPLYSWYNIVGFWDPYGNTKGITVAIANNDDGTDNALIGKQNLGDQIVK QMKSNDQLGWTFVTEAEAMDQVESGKAYAAIIIPKDFSNDLAGVVTGGKSRPTLEYYVNEKASAIAPKVTDVGASTVDRT VNSTFVSTVSKVLTEVINTVGDKVISTEDTTKAKALTALAEASGDVQHTRSTIAKLTTKLTDTPEQTRTARQALDDARTL GIDTAKGLAGVSTLIGTTQTSLNGFVTSTSEALDQGSSLLSQAAAQANQSVGTVAGTISAANQQVDGLINTAEDINQANA DIIDQLKGLPNTDREPLQSAIAALESRNSELAGALGNLDSLNTTIGNASTDTAGLAQHLNTATQTTVREANTARGTIISG TIPQLNTGLNTLSSTANTLSTGITSQGSLIDQSKHTLDQLDKAASTTVTALRDTDKALAGMQTKLETLATDIKTLSVSSS LSSLIDTDGKLDAATIADFMLSPSVISERAVYPVASYGSGMAPLFTTLSLWVGAFVLVVIPKLETDDEGIDDLTPTQGYL GRFLLLATLAAVQGLVTAIGDLVIGIQCASAPVFLLTCVITSLVYMSVIFALSTTFMHVGKGVCVALVILQVPGASGLYP IEMMPAFFRAIYPLLPFTYSIDAMRETIGGFYDGLWFAYIGKLLVFAVLAFVLGLGARPKLANLNRLFAREIKESDMIIG EPVHLPGSEYRVTQAIAALADRDEYRHAIERRAAKFAYQYPRLLLGALIAGFVVPAALIIVFALTTSEKIVVMGTWLAWV LIIMGFLMVVEFMRDSIRRQTELGNLSDESIRAMLYGHKAKRRDTSAERHEEADPSAAVTAIIPTIPPTKEGRHAR
Sequences:
>Translated_876_residues MGNIFKVLKRDFLRLFKVPAAWVILFGMVFIPPLYSWYNIVGFWDPYGNTKGITVAIANNDDGTDNALIGKQNLGDQIVK QMKSNDQLGWTFVTEAEAMDQVESGKAYAAIIIPKDFSNDLAGVVTGGKSRPTLEYYVNEKASAIAPKVTDVGASTVDRT VNSTFVSTVSKVLTEVINTVGDKVISTEDTTKAKALTALAEASGDVQHTRSTIAKLTTKLTDTPEQTRTARQALDDARTL GIDTAKGLAGVSTLIGTTQTSLNGFVTSTSEALDQGSSLLSQAAAQANQSVGTVAGTISAANQQVDGLINTAEDINQANA DIIDQLKGLPNTDREPLQSAIAALESRNSELAGALGNLDSLNTTIGNASTDTAGLAQHLNTATQTTVREANTARGTIISG TIPQLNTGLNTLSSTANTLSTGITSQGSLIDQSKHTLDQLDKAASTTVTALRDTDKALAGMQTKLETLATDIKTLSVSSS LSSLIDTDGKLDAATIADFMLSPSVISERAVYPVASYGSGMAPLFTTLSLWVGAFVLVVIPKLETDDEGIDDLTPTQGYL GRFLLLATLAAVQGLVTAIGDLVIGIQCASAPVFLLTCVITSLVYMSVIFALSTTFMHVGKGVCVALVILQVPGASGLYP IEMMPAFFRAIYPLLPFTYSIDAMRETIGGFYDGLWFAYIGKLLVFAVLAFVLGLGARPKLANLNRLFAREIKESDMIIG EPVHLPGSEYRVTQAIAALADRDEYRHAIERRAAKFAYQYPRLLLGALIAGFVVPAALIIVFALTTSEKIVVMGTWLAWV LIIMGFLMVVEFMRDSIRRQTELGNLSDESIRAMLYGHKAKRRDTSAERHEEADPSAAVTAIIPTIPPTKEGRHAR >Mature_875_residues GNIFKVLKRDFLRLFKVPAAWVILFGMVFIPPLYSWYNIVGFWDPYGNTKGITVAIANNDDGTDNALIGKQNLGDQIVKQ MKSNDQLGWTFVTEAEAMDQVESGKAYAAIIIPKDFSNDLAGVVTGGKSRPTLEYYVNEKASAIAPKVTDVGASTVDRTV NSTFVSTVSKVLTEVINTVGDKVISTEDTTKAKALTALAEASGDVQHTRSTIAKLTTKLTDTPEQTRTARQALDDARTLG IDTAKGLAGVSTLIGTTQTSLNGFVTSTSEALDQGSSLLSQAAAQANQSVGTVAGTISAANQQVDGLINTAEDINQANAD IIDQLKGLPNTDREPLQSAIAALESRNSELAGALGNLDSLNTTIGNASTDTAGLAQHLNTATQTTVREANTARGTIISGT IPQLNTGLNTLSSTANTLSTGITSQGSLIDQSKHTLDQLDKAASTTVTALRDTDKALAGMQTKLETLATDIKTLSVSSSL SSLIDTDGKLDAATIADFMLSPSVISERAVYPVASYGSGMAPLFTTLSLWVGAFVLVVIPKLETDDEGIDDLTPTQGYLG RFLLLATLAAVQGLVTAIGDLVIGIQCASAPVFLLTCVITSLVYMSVIFALSTTFMHVGKGVCVALVILQVPGASGLYPI EMMPAFFRAIYPLLPFTYSIDAMRETIGGFYDGLWFAYIGKLLVFAVLAFVLGLGARPKLANLNRLFAREIKESDMIIGE PVHLPGSEYRVTQAIAALADRDEYRHAIERRAAKFAYQYPRLLLGALIAGFVVPAALIIVFALTTSEKIVVMGTWLAWVL IIMGFLMVVEFMRDSIRRQTELGNLSDESIRAMLYGHKAKRRDTSAERHEEADPSAAVTAIIPTIPPTKEGRHAR
Specific function: Required for phage infection [H]
COG id: COG1511
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013525 - InterPro: IPR017501 - InterPro: IPR017500 [H]
Pfam domain/function: PF01061 ABC2_membrane [H]
EC number: NA
Molecular weight: Translated: 93488; Mature: 93357
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNIFKVLKRDFLRLFKVPAAWVILFGMVFIPPLYSWYNIVGFWDPYGNTKGITVAIANN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCEEEEEECC DDGTDNALIGKQNLGDQIVKQMKSNDQLGWTFVTEAEAMDQVESGKAYAAIIIPKDFSND CCCCCCCEECCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCEEEEEEECCCCCCC LAGVVTGGKSRPTLEYYVNEKASAIAPKVTDVGASTVDRTVNSTFVSTVSKVLTEVINTV HHHHEECCCCCCCEEEEECCHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GDKVISTEDTTKAKALTALAEASGDVQHTRSTIAKLTTKLTDTPEQTRTARQALDDARTL CCCEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC GIDTAKGLAGVSTLIGTTQTSLNGFVTSTSEALDQGSSLLSQAAAQANQSVGTVAGTISA CCCHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ANQQVDGLINTAEDINQANADIIDQLKGLPNTDREPLQSAIAALESRNSELAGALGNLDS HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCHH LNTTIGNASTDTAGLAQHLNTATQTTVREANTARGTIISGTIPQLNTGLNTLSSTANTLS HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH TGITSQGSLIDQSKHTLDQLDKAASTTVTALRDTDKALAGMQTKLETLATDIKTLSVSSS HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSLIDTDGKLDAATIADFMLSPSVISERAVYPVASYGSGMAPLFTTLSLWVGAFVLVVI HHHHHCCCCCCHHHHHHHHHHCHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHC PKLETDDEGIDDLTPTQGYLGRFLLLATLAAVQGLVTAIGDLVIGIQCASAPVFLLTCVI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TSLVYMSVIFALSTTFMHVGKGVCVALVILQVPGASGLYPIEMMPAFFRAIYPLLPFTYS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHH IDAMRETIGGFYDGLWFAYIGKLLVFAVLAFVLGLGARPKLANLNRLFAREIKESDMIIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEC EPVHLPGSEYRVTQAIAALADRDEYRHAIERRAAKFAYQYPRLLLGALIAGFVVPAALII CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFALTTSEKIVVMGTWLAWVLIIMGFLMVVEFMRDSIRRQTELGNLSDESIRAMLYGHKA HHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHH KRRDTSAERHEEADPSAAVTAIIPTIPPTKEGRHAR HHCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure GNIFKVLKRDFLRLFKVPAAWVILFGMVFIPPLYSWYNIVGFWDPYGNTKGITVAIANN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCEEEEEECC DDGTDNALIGKQNLGDQIVKQMKSNDQLGWTFVTEAEAMDQVESGKAYAAIIIPKDFSND CCCCCCCEECCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCEEEEEEECCCCCCC LAGVVTGGKSRPTLEYYVNEKASAIAPKVTDVGASTVDRTVNSTFVSTVSKVLTEVINTV HHHHEECCCCCCCEEEEECCHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GDKVISTEDTTKAKALTALAEASGDVQHTRSTIAKLTTKLTDTPEQTRTARQALDDARTL CCCEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC GIDTAKGLAGVSTLIGTTQTSLNGFVTSTSEALDQGSSLLSQAAAQANQSVGTVAGTISA CCCHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ANQQVDGLINTAEDINQANADIIDQLKGLPNTDREPLQSAIAALESRNSELAGALGNLDS HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCHH LNTTIGNASTDTAGLAQHLNTATQTTVREANTARGTIISGTIPQLNTGLNTLSSTANTLS HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH TGITSQGSLIDQSKHTLDQLDKAASTTVTALRDTDKALAGMQTKLETLATDIKTLSVSSS HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSLIDTDGKLDAATIADFMLSPSVISERAVYPVASYGSGMAPLFTTLSLWVGAFVLVVI HHHHHCCCCCCHHHHHHHHHHCHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHC PKLETDDEGIDDLTPTQGYLGRFLLLATLAAVQGLVTAIGDLVIGIQCASAPVFLLTCVI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TSLVYMSVIFALSTTFMHVGKGVCVALVILQVPGASGLYPIEMMPAFFRAIYPLLPFTYS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHH IDAMRETIGGFYDGLWFAYIGKLLVFAVLAFVLGLGARPKLANLNRLFAREIKESDMIIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEC EPVHLPGSEYRVTQAIAALADRDEYRHAIERRAAKFAYQYPRLLLGALIAGFVVPAALII CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFALTTSEKIVVMGTWLAWVLIIMGFLMVVEFMRDSIRRQTELGNLSDESIRAMLYGHKA HHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHH KRRDTSAERHEEADPSAAVTAIIPTIPPTKEGRHAR HHCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8366036 [H]