Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is yhgE [H]

Identifier: 213691125

GI number: 213691125

Start: 243406

End: 245568

Strand: Reverse

Name: yhgE [H]

Synonym: Blon_0204

Alternate gene names: 213691125

Gene position: 245568-243406 (Counterclockwise)

Preceding gene: 213691126

Following gene: 213691124

Centisome position: 8.67

GC content: 59.13

Gene sequence:

>2163_bases
ATGAACACCATGTGGAAACTGTTTACCGGCGACATCAAACGCCTGACCAGCAACGTGGTCTCCATCATCATCGTGATCGG
CTTGGTGATGATTCCCGGCCTGTTCACCTGGTTCAACGTGGCCGCATGCTGGGACCCGTTCTCGAATATGAAGAACCTGA
AATTCGCGGTGGCGAACGTGGATGAGGGGTATCGTTCCGACCTGATCCCGATGAAAGTCACGGTCGGCAATCAGGTGGTG
AACGCGCTGCGCGCCAACAGTCAGCTCGATTGGACGATCACGTCCAAAGCCGATGCCGTCGAGGGCGCACGATCCGGCAA
ATACTACGCGGCCATCGTAATTCCGAAGTCGTTCAGCAAAGACATGATGACCTTCTTCTCCGACGATGTGCAGCATGCCG
AACTGACCTATTACCGCAACGAGAAGAAGAACGCGCTGGCACCGAATCTGCTCAACGAGGGCACGGACGAGGTGGCGGCG
GAAATCAACACCACGTTCGCCAAGACCATCACTTCGGCAGGGCTGGAAATCGCGTCTTCGCTGGCCGATCAGCTGTCCAA
GCCCGAAGCCAAAGAGCAACTGAATACCTTCAACGCCAATATCGCCGATTTCGCCACACGGCTTGACGATACGGCGGATT
TGCTTGGCACATACAGCGCATTGACCGATACGGCCGGCGCCTTGCTCGACACCTCGAACTCGCTGATCACTCAGGTTTCC
TCTGCCGCCAAACAAGGAGGCAAGGATCTCGCCAGCGCCAAGCAGGGAGTCACCGACGTGGTCGGAGCCCTGGGCACCAC
CGCTGACGCGATGAGCAGCGCACTGGACGCGAGCGCCTCCAGTTTCGGCGCGGTGTCCGATTCCATAGACAAGCTGTATT
CCGACGCGAATGATGGTGCCACCACGGCCGCCGACGAATTGGACCGTCAAGCCACGGCCATTGGCAAGCAGACGGAGAAA
TACACTGAAATTCGCAACACGTTGGCCGGCATACTGGGCAACGACTCATCCATCATCACGGCGATTGACCGTTCAATCGC
ACGGCAGAACAGGCTGCGGCAAGCGCTGAATACGGCGGCGACCAATATTCGCCAAGGTAATCAGGACGCGCAGGATCAGC
ATGCGCAGGTCAAGGATCTGGCCGATCAAGCGCAGAACAGTATCGCCAATATCAAGTCGGATTTCACGGCCACGGTGAAA
CCGCAGATCGACTCCCTGTCGTCCACCGTCTCTGACGCCTCCGGCATACTGAGTTCCGGCGCCACCCAGTTGGACTCCAC
GCTCGGCGACCTGAAAAGGACTTCCGACGACGCCAGCGATATGCTCAGCGACGCTCGCACCACGTTGGACAAGGTGTCCG
GCAAACTGCGTTCCGCCGGTGCCGAACTGGCTTCGTTCAACAGCACACTGAGCGACGCACTAAACAGTGGCGATATGAGC
ATGGTCAAAGAGGTGCTGGGCAATGATCCCGAAACGCTGGCCAGTACGTTGGCCGCGCCGGTGCAGCTCAGGCGCAAGGC
CGTATTCCCGGTGGCGAATTTCGGTTCGTCGATGGCGCCGTTCTACACGCTGCTGCCGCTGTGGGTGGGCGCGCTGCTGA
TGGTGGTGACGCTGAAAACCACCGTGTCTCGCCGGACGCGCAAAGCCTTGGGCGATCCGCGGCCGCATCGGCTCTTCCTT
GGGCATTACGGGGTGTTCGCGCTGATTGCGCTGCTGCAATCCACGGTGTCGCTCGGCGGCGATCTGCTGTTCCTGCGCGT
GCAGGCCGTGCATCCGCTGCTGTTTATGTTGTCCGGATGGCTGGCCTCGCTGGTGTTCTCGTTCTTCACCTATACGATGG
TGGTGAGTTTCGGCAATGTGGGTAAGGCAATCGGCGTGCTTATGCTCATCGTGCAGATTTCGGGTGCGAACGCTGCCTAC
CCGGTGCAGATGTTGCCCGACTTCATCGCCAAAGTCAGTCCGTTCTTGCCGCTCACCCATGCGGTGACGATGATGCGTGC
GGCCATCGCCGGCATCTACGACATGGATTACTGGCGGGCCGCCGGAATGCTGCTGGCATTCGTGCCGCCGCTACTGTTGC
TTGGACTGTTGCTCAGGAAGCCACTGGTGCGGTTCAACCAGTGGTATGTAGCCAAAGTCGAGAGCACTAAAGTGCTGGGC
TAG

Upstream 100 bases:

>100_bases
GCGACACCTCCGCCGAACGCCACGAAGAAGCGGACCCGAGCGCCGCCGTTACCGCAATCATCCCCACTATTCCGCCGACC
AAGGAAGGCAGGCACGCACG

Downstream 100 bases:

>100_bases
TAGGTATTATCCGGGAGTTGCCTACAAACGGCATGGACTTACCACCCTCAGTCTGGCTTTGCCAGCCAGCTCCCGCCAGC
TGGAGCGTACGGGAGCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFB [H]

Number of amino acids: Translated: 720; Mature: 720

Protein sequence:

>720_residues
MNTMWKLFTGDIKRLTSNVVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANVDEGYRSDLIPMKVTVGNQVV
NALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSKDMMTFFSDDVQHAELTYYRNEKKNALAPNLLNEGTDEVAA
EINTTFAKTITSAGLEIASSLADQLSKPEAKEQLNTFNANIADFATRLDDTADLLGTYSALTDTAGALLDTSNSLITQVS
SAAKQGGKDLASAKQGVTDVVGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANDGATTAADELDRQATAIGKQTEK
YTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAATNIRQGNQDAQDQHAQVKDLADQAQNSIANIKSDFTATVK
PQIDSLSSTVSDASGILSSGATQLDSTLGDLKRTSDDASDMLSDARTTLDKVSGKLRSAGAELASFNSTLSDALNSGDMS
MVKEVLGNDPETLASTLAAPVQLRRKAVFPVANFGSSMAPFYTLLPLWVGALLMVVTLKTTVSRRTRKALGDPRPHRLFL
GHYGVFALIALLQSTVSLGGDLLFLRVQAVHPLLFMLSGWLASLVFSFFTYTMVVSFGNVGKAIGVLMLIVQISGANAAY
PVQMLPDFIAKVSPFLPLTHAVTMMRAAIAGIYDMDYWRAAGMLLAFVPPLLLLGLLLRKPLVRFNQWYVAKVESTKVLG

Sequences:

>Translated_720_residues
MNTMWKLFTGDIKRLTSNVVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANVDEGYRSDLIPMKVTVGNQVV
NALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSKDMMTFFSDDVQHAELTYYRNEKKNALAPNLLNEGTDEVAA
EINTTFAKTITSAGLEIASSLADQLSKPEAKEQLNTFNANIADFATRLDDTADLLGTYSALTDTAGALLDTSNSLITQVS
SAAKQGGKDLASAKQGVTDVVGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANDGATTAADELDRQATAIGKQTEK
YTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAATNIRQGNQDAQDQHAQVKDLADQAQNSIANIKSDFTATVK
PQIDSLSSTVSDASGILSSGATQLDSTLGDLKRTSDDASDMLSDARTTLDKVSGKLRSAGAELASFNSTLSDALNSGDMS
MVKEVLGNDPETLASTLAAPVQLRRKAVFPVANFGSSMAPFYTLLPLWVGALLMVVTLKTTVSRRTRKALGDPRPHRLFL
GHYGVFALIALLQSTVSLGGDLLFLRVQAVHPLLFMLSGWLASLVFSFFTYTMVVSFGNVGKAIGVLMLIVQISGANAAY
PVQMLPDFIAKVSPFLPLTHAVTMMRAAIAGIYDMDYWRAAGMLLAFVPPLLLLGLLLRKPLVRFNQWYVAKVESTKVLG
>Mature_720_residues
MNTMWKLFTGDIKRLTSNVVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANVDEGYRSDLIPMKVTVGNQVV
NALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSKDMMTFFSDDVQHAELTYYRNEKKNALAPNLLNEGTDEVAA
EINTTFAKTITSAGLEIASSLADQLSKPEAKEQLNTFNANIADFATRLDDTADLLGTYSALTDTAGALLDTSNSLITQVS
SAAKQGGKDLASAKQGVTDVVGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANDGATTAADELDRQATAIGKQTEK
YTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAATNIRQGNQDAQDQHAQVKDLADQAQNSIANIKSDFTATVK
PQIDSLSSTVSDASGILSSGATQLDSTLGDLKRTSDDASDMLSDARTTLDKVSGKLRSAGAELASFNSTLSDALNSGDMS
MVKEVLGNDPETLASTLAAPVQLRRKAVFPVANFGSSMAPFYTLLPLWVGALLMVVTLKTTVSRRTRKALGDPRPHRLFL
GHYGVFALIALLQSTVSLGGDLLFLRVQAVHPLLFMLSGWLASLVFSFFTYTMVVSFGNVGKAIGVLMLIVQISGANAAY
PVQMLPDFIAKVSPFLPLTHAVTMMRAAIAGIYDMDYWRAAGMLLAFVPPLLLLGLLLRKPLVRFNQWYVAKVESTKVLG

Specific function: Unknown

COG id: COG1511

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To L.lactis phage infection protein (PIP) [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013525
- InterPro:   IPR022703
- InterPro:   IPR017501
- InterPro:   IPR017500 [H]

Pfam domain/function: PF01061 ABC2_membrane; PF12051 DUF3533 [H]

EC number: NA

Molecular weight: Translated: 77139; Mature: 77139

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTMWKLFTGDIKRLTSNVVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEECC
DEGYRSDLIPMKVTVGNQVVNALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSK
CCCHHCCCCEEEEEHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCCCEEEEEEECCCCCH
DMMTFFSDDVQHAELTYYRNEKKNALAPNLLNEGTDEVAAEINTTFAKTITSAGLEIASS
HHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LADQLSKPEAKEQLNTFNANIADFATRLDDTADLLGTYSALTDTAGALLDTSNSLITQVS
HHHHHCCCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SAAKQGGKDLASAKQGVTDVVGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANDGA
HHHHHCCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCHHHCCHHHHHHHHHHCCCCCCC
TTAADELDRQATAIGKQTEKYTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TNIRQGNQDAQDQHAQVKDLADQAQNSIANIKSDFTATVKPQIDSLSSTVSDASGILSSG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHCC
ATQLDSTLGDLKRTSDDASDMLSDARTTLDKVSGKLRSAGAELASFNSTLSDALNSGDMS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
MVKEVLGNDPETLASTLAAPVQLRRKAVFPVANFGSSMAPFYTLLPLWVGALLMVVTLKT
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
TVSRRTRKALGDPRPHRLFLGHYGVFALIALLQSTVSLGGDLLFLRVQAVHPLLFMLSGW
HHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LASLVFSFFTYTMVVSFGNVGKAIGVLMLIVQISGANAAYPVQMLPDFIAKVSPFLPLTH
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHH
AVTMMRAAIAGIYDMDYWRAAGMLLAFVPPLLLLGLLLRKPLVRFNQWYVAKVESTKVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
>Mature Secondary Structure
MNTMWKLFTGDIKRLTSNVVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEECC
DEGYRSDLIPMKVTVGNQVVNALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSK
CCCHHCCCCEEEEEHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCCCEEEEEEECCCCCH
DMMTFFSDDVQHAELTYYRNEKKNALAPNLLNEGTDEVAAEINTTFAKTITSAGLEIASS
HHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LADQLSKPEAKEQLNTFNANIADFATRLDDTADLLGTYSALTDTAGALLDTSNSLITQVS
HHHHHCCCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SAAKQGGKDLASAKQGVTDVVGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANDGA
HHHHHCCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCHHHCCHHHHHHHHHHCCCCCCC
TTAADELDRQATAIGKQTEKYTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TNIRQGNQDAQDQHAQVKDLADQAQNSIANIKSDFTATVKPQIDSLSSTVSDASGILSSG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHCC
ATQLDSTLGDLKRTSDDASDMLSDARTTLDKVSGKLRSAGAELASFNSTLSDALNSGDMS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
MVKEVLGNDPETLASTLAAPVQLRRKAVFPVANFGSSMAPFYTLLPLWVGALLMVVTLKT
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
TVSRRTRKALGDPRPHRLFLGHYGVFALIALLQSTVSLGGDLLFLRVQAVHPLLFMLSGW
HHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LASLVFSFFTYTMVVSFGNVGKAIGVLMLIVQISGANAAYPVQMLPDFIAKVSPFLPLTH
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHH
AVTMMRAAIAGIYDMDYWRAAGMLLAFVPPLLLLGLLLRKPLVRFNQWYVAKVESTKVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 1459957 [H]