| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is yhgE [H]
Identifier: 213691125
GI number: 213691125
Start: 243406
End: 245568
Strand: Reverse
Name: yhgE [H]
Synonym: Blon_0204
Alternate gene names: 213691125
Gene position: 245568-243406 (Counterclockwise)
Preceding gene: 213691126
Following gene: 213691124
Centisome position: 8.67
GC content: 59.13
Gene sequence:
>2163_bases ATGAACACCATGTGGAAACTGTTTACCGGCGACATCAAACGCCTGACCAGCAACGTGGTCTCCATCATCATCGTGATCGG CTTGGTGATGATTCCCGGCCTGTTCACCTGGTTCAACGTGGCCGCATGCTGGGACCCGTTCTCGAATATGAAGAACCTGA AATTCGCGGTGGCGAACGTGGATGAGGGGTATCGTTCCGACCTGATCCCGATGAAAGTCACGGTCGGCAATCAGGTGGTG AACGCGCTGCGCGCCAACAGTCAGCTCGATTGGACGATCACGTCCAAAGCCGATGCCGTCGAGGGCGCACGATCCGGCAA ATACTACGCGGCCATCGTAATTCCGAAGTCGTTCAGCAAAGACATGATGACCTTCTTCTCCGACGATGTGCAGCATGCCG AACTGACCTATTACCGCAACGAGAAGAAGAACGCGCTGGCACCGAATCTGCTCAACGAGGGCACGGACGAGGTGGCGGCG GAAATCAACACCACGTTCGCCAAGACCATCACTTCGGCAGGGCTGGAAATCGCGTCTTCGCTGGCCGATCAGCTGTCCAA GCCCGAAGCCAAAGAGCAACTGAATACCTTCAACGCCAATATCGCCGATTTCGCCACACGGCTTGACGATACGGCGGATT TGCTTGGCACATACAGCGCATTGACCGATACGGCCGGCGCCTTGCTCGACACCTCGAACTCGCTGATCACTCAGGTTTCC TCTGCCGCCAAACAAGGAGGCAAGGATCTCGCCAGCGCCAAGCAGGGAGTCACCGACGTGGTCGGAGCCCTGGGCACCAC CGCTGACGCGATGAGCAGCGCACTGGACGCGAGCGCCTCCAGTTTCGGCGCGGTGTCCGATTCCATAGACAAGCTGTATT CCGACGCGAATGATGGTGCCACCACGGCCGCCGACGAATTGGACCGTCAAGCCACGGCCATTGGCAAGCAGACGGAGAAA TACACTGAAATTCGCAACACGTTGGCCGGCATACTGGGCAACGACTCATCCATCATCACGGCGATTGACCGTTCAATCGC ACGGCAGAACAGGCTGCGGCAAGCGCTGAATACGGCGGCGACCAATATTCGCCAAGGTAATCAGGACGCGCAGGATCAGC ATGCGCAGGTCAAGGATCTGGCCGATCAAGCGCAGAACAGTATCGCCAATATCAAGTCGGATTTCACGGCCACGGTGAAA CCGCAGATCGACTCCCTGTCGTCCACCGTCTCTGACGCCTCCGGCATACTGAGTTCCGGCGCCACCCAGTTGGACTCCAC GCTCGGCGACCTGAAAAGGACTTCCGACGACGCCAGCGATATGCTCAGCGACGCTCGCACCACGTTGGACAAGGTGTCCG GCAAACTGCGTTCCGCCGGTGCCGAACTGGCTTCGTTCAACAGCACACTGAGCGACGCACTAAACAGTGGCGATATGAGC ATGGTCAAAGAGGTGCTGGGCAATGATCCCGAAACGCTGGCCAGTACGTTGGCCGCGCCGGTGCAGCTCAGGCGCAAGGC CGTATTCCCGGTGGCGAATTTCGGTTCGTCGATGGCGCCGTTCTACACGCTGCTGCCGCTGTGGGTGGGCGCGCTGCTGA TGGTGGTGACGCTGAAAACCACCGTGTCTCGCCGGACGCGCAAAGCCTTGGGCGATCCGCGGCCGCATCGGCTCTTCCTT GGGCATTACGGGGTGTTCGCGCTGATTGCGCTGCTGCAATCCACGGTGTCGCTCGGCGGCGATCTGCTGTTCCTGCGCGT GCAGGCCGTGCATCCGCTGCTGTTTATGTTGTCCGGATGGCTGGCCTCGCTGGTGTTCTCGTTCTTCACCTATACGATGG TGGTGAGTTTCGGCAATGTGGGTAAGGCAATCGGCGTGCTTATGCTCATCGTGCAGATTTCGGGTGCGAACGCTGCCTAC CCGGTGCAGATGTTGCCCGACTTCATCGCCAAAGTCAGTCCGTTCTTGCCGCTCACCCATGCGGTGACGATGATGCGTGC GGCCATCGCCGGCATCTACGACATGGATTACTGGCGGGCCGCCGGAATGCTGCTGGCATTCGTGCCGCCGCTACTGTTGC TTGGACTGTTGCTCAGGAAGCCACTGGTGCGGTTCAACCAGTGGTATGTAGCCAAAGTCGAGAGCACTAAAGTGCTGGGC TAG
Upstream 100 bases:
>100_bases GCGACACCTCCGCCGAACGCCACGAAGAAGCGGACCCGAGCGCCGCCGTTACCGCAATCATCCCCACTATTCCGCCGACC AAGGAAGGCAGGCACGCACG
Downstream 100 bases:
>100_bases TAGGTATTATCCGGGAGTTGCCTACAAACGGCATGGACTTACCACCCTCAGTCTGGCTTTGCCAGCCAGCTCCCGCCAGC TGGAGCGTACGGGAGCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: ORFB [H]
Number of amino acids: Translated: 720; Mature: 720
Protein sequence:
>720_residues MNTMWKLFTGDIKRLTSNVVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANVDEGYRSDLIPMKVTVGNQVV NALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSKDMMTFFSDDVQHAELTYYRNEKKNALAPNLLNEGTDEVAA EINTTFAKTITSAGLEIASSLADQLSKPEAKEQLNTFNANIADFATRLDDTADLLGTYSALTDTAGALLDTSNSLITQVS SAAKQGGKDLASAKQGVTDVVGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANDGATTAADELDRQATAIGKQTEK YTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAATNIRQGNQDAQDQHAQVKDLADQAQNSIANIKSDFTATVK PQIDSLSSTVSDASGILSSGATQLDSTLGDLKRTSDDASDMLSDARTTLDKVSGKLRSAGAELASFNSTLSDALNSGDMS MVKEVLGNDPETLASTLAAPVQLRRKAVFPVANFGSSMAPFYTLLPLWVGALLMVVTLKTTVSRRTRKALGDPRPHRLFL GHYGVFALIALLQSTVSLGGDLLFLRVQAVHPLLFMLSGWLASLVFSFFTYTMVVSFGNVGKAIGVLMLIVQISGANAAY PVQMLPDFIAKVSPFLPLTHAVTMMRAAIAGIYDMDYWRAAGMLLAFVPPLLLLGLLLRKPLVRFNQWYVAKVESTKVLG
Sequences:
>Translated_720_residues MNTMWKLFTGDIKRLTSNVVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANVDEGYRSDLIPMKVTVGNQVV NALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSKDMMTFFSDDVQHAELTYYRNEKKNALAPNLLNEGTDEVAA EINTTFAKTITSAGLEIASSLADQLSKPEAKEQLNTFNANIADFATRLDDTADLLGTYSALTDTAGALLDTSNSLITQVS SAAKQGGKDLASAKQGVTDVVGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANDGATTAADELDRQATAIGKQTEK YTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAATNIRQGNQDAQDQHAQVKDLADQAQNSIANIKSDFTATVK PQIDSLSSTVSDASGILSSGATQLDSTLGDLKRTSDDASDMLSDARTTLDKVSGKLRSAGAELASFNSTLSDALNSGDMS MVKEVLGNDPETLASTLAAPVQLRRKAVFPVANFGSSMAPFYTLLPLWVGALLMVVTLKTTVSRRTRKALGDPRPHRLFL GHYGVFALIALLQSTVSLGGDLLFLRVQAVHPLLFMLSGWLASLVFSFFTYTMVVSFGNVGKAIGVLMLIVQISGANAAY PVQMLPDFIAKVSPFLPLTHAVTMMRAAIAGIYDMDYWRAAGMLLAFVPPLLLLGLLLRKPLVRFNQWYVAKVESTKVLG >Mature_720_residues MNTMWKLFTGDIKRLTSNVVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANVDEGYRSDLIPMKVTVGNQVV NALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSKDMMTFFSDDVQHAELTYYRNEKKNALAPNLLNEGTDEVAA EINTTFAKTITSAGLEIASSLADQLSKPEAKEQLNTFNANIADFATRLDDTADLLGTYSALTDTAGALLDTSNSLITQVS SAAKQGGKDLASAKQGVTDVVGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANDGATTAADELDRQATAIGKQTEK YTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAATNIRQGNQDAQDQHAQVKDLADQAQNSIANIKSDFTATVK PQIDSLSSTVSDASGILSSGATQLDSTLGDLKRTSDDASDMLSDARTTLDKVSGKLRSAGAELASFNSTLSDALNSGDMS MVKEVLGNDPETLASTLAAPVQLRRKAVFPVANFGSSMAPFYTLLPLWVGALLMVVTLKTTVSRRTRKALGDPRPHRLFL GHYGVFALIALLQSTVSLGGDLLFLRVQAVHPLLFMLSGWLASLVFSFFTYTMVVSFGNVGKAIGVLMLIVQISGANAAY PVQMLPDFIAKVSPFLPLTHAVTMMRAAIAGIYDMDYWRAAGMLLAFVPPLLLLGLLLRKPLVRFNQWYVAKVESTKVLG
Specific function: Unknown
COG id: COG1511
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To L.lactis phage infection protein (PIP) [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013525 - InterPro: IPR022703 - InterPro: IPR017501 - InterPro: IPR017500 [H]
Pfam domain/function: PF01061 ABC2_membrane; PF12051 DUF3533 [H]
EC number: NA
Molecular weight: Translated: 77139; Mature: 77139
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTMWKLFTGDIKRLTSNVVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEECC DEGYRSDLIPMKVTVGNQVVNALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSK CCCHHCCCCEEEEEHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCCCEEEEEEECCCCCH DMMTFFSDDVQHAELTYYRNEKKNALAPNLLNEGTDEVAAEINTTFAKTITSAGLEIASS HHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LADQLSKPEAKEQLNTFNANIADFATRLDDTADLLGTYSALTDTAGALLDTSNSLITQVS HHHHHCCCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SAAKQGGKDLASAKQGVTDVVGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANDGA HHHHHCCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCHHHCCHHHHHHHHHHCCCCCCC TTAADELDRQATAIGKQTEKYTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH TNIRQGNQDAQDQHAQVKDLADQAQNSIANIKSDFTATVKPQIDSLSSTVSDASGILSSG HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHCC ATQLDSTLGDLKRTSDDASDMLSDARTTLDKVSGKLRSAGAELASFNSTLSDALNSGDMS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH MVKEVLGNDPETLASTLAAPVQLRRKAVFPVANFGSSMAPFYTLLPLWVGALLMVVTLKT HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH TVSRRTRKALGDPRPHRLFLGHYGVFALIALLQSTVSLGGDLLFLRVQAVHPLLFMLSGW HHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LASLVFSFFTYTMVVSFGNVGKAIGVLMLIVQISGANAAYPVQMLPDFIAKVSPFLPLTH HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHH AVTMMRAAIAGIYDMDYWRAAGMLLAFVPPLLLLGLLLRKPLVRFNQWYVAKVESTKVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC >Mature Secondary Structure MNTMWKLFTGDIKRLTSNVVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEECC DEGYRSDLIPMKVTVGNQVVNALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSK CCCHHCCCCEEEEEHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCCCEEEEEEECCCCCH DMMTFFSDDVQHAELTYYRNEKKNALAPNLLNEGTDEVAAEINTTFAKTITSAGLEIASS HHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LADQLSKPEAKEQLNTFNANIADFATRLDDTADLLGTYSALTDTAGALLDTSNSLITQVS HHHHHCCCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SAAKQGGKDLASAKQGVTDVVGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANDGA HHHHHCCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCHHHCCHHHHHHHHHHCCCCCCC TTAADELDRQATAIGKQTEKYTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH TNIRQGNQDAQDQHAQVKDLADQAQNSIANIKSDFTATVKPQIDSLSSTVSDASGILSSG HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHCC ATQLDSTLGDLKRTSDDASDMLSDARTTLDKVSGKLRSAGAELASFNSTLSDALNSGDMS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH MVKEVLGNDPETLASTLAAPVQLRRKAVFPVANFGSSMAPFYTLLPLWVGALLMVVTLKT HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH TVSRRTRKALGDPRPHRLFLGHYGVFALIALLQSTVSLGGDLLFLRVQAVHPLLFMLSGW HHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LASLVFSFFTYTMVVSFGNVGKAIGVLMLIVQISGANAAYPVQMLPDFIAKVSPFLPLTH HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHH AVTMMRAAIAGIYDMDYWRAAGMLLAFVPPLLLLGLLLRKPLVRFNQWYVAKVESTKVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 1459957 [H]