| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is pgl [H]
Identifier: 213691129
GI number: 213691129
Start: 251846
End: 252688
Strand: Reverse
Name: pgl [H]
Synonym: Blon_0208
Alternate gene names: 213691129
Gene position: 252688-251846 (Counterclockwise)
Preceding gene: 213691130
Following gene: 213691126
Centisome position: 8.92
GC content: 60.38
Gene sequence:
>843_bases ATGGCAACTCGAAAACTCATTGTGTATCCGAATAAAGATCTGATGATTCAGGCTGGCGCGCAACGTTTTGTCTTGGCGCT ACTCGATTTGCTCGCCGAGCGACTGCCGGATGGCACGCACCGCACGCGCGTGGATGTGGCGCTGTCTGGCGGTTCGGCCG CGCAGCCGTTGGGCTTGGTACTGAGCGATCCGCTGGCTGATGCGATTGATTGGTCGCGCGTGCATTTCTGGTGGAGCGAC GAACGTTTTGTGCCGGCTTACGACACCGATCGCAATGCTTTGGAGGCCCGTCGCCTGCTGCTTGACCAGCTCGTGGCCAA CGGCAAGCTGCCGGAATCAAATATCCATGAGATGGCGGCCGACGTTCGTTCCGCCGACGAGATCGCCGATGTTATGTCCG ATGCCGACAGCGCCGACGATTCCGTTCGCGCCGCCGCCGATGCCGCGAATGATGCATTGCTGGACGCCGCCGCCCGCGAT TATGGGGCCGAACTCATCCGTGAGCTTGGTCCGGAACCGGTAATCGATCTGATGATTCTCGGCATGGGACCGGACGGTCA CTATGCGTCGCTGTTCCCTGGTCATGATGAGGTCAAGGTTACCGATAGGCTCACCGTGGGTGTGAACCACTCCCCCAAGA TGCCGCCGCTGCGTGTTTCATTGACCGCGCCGCTCATCGCACGTTCACGCCATACGTGGTTCTTCGCCGCCGGTGCCGGC AAAGCCGAATCGCTGGCCCATGTCTTCGAGCAGCCCAACAACCCGGATTACCCGTCCTCCTACGCCAACGGAGTGGACGA GTTCACCTGGTTCTCCACCGAAGAAACCGTCACCGCATTGTGA
Upstream 100 bases:
>100_bases AATGGCTGGATTCCCGGCATGCCACCCGTATTATGCGTTGTCAACTGACAACACAATCCACATTGCAAAGTACGACACAT ACCCCATATAAGGACCATAC
Downstream 100 bases:
>100_bases GTGAATTAAGCCCCCTCTGATGAGGGGGCTTAATTCGTCTATGGCTACGCCTCGATCTCAGGCTTGCTGTTTTCTCAGCT CGGCTATCGCCGAGCCTGAA
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MATRKLIVYPNKDLMIQAGAQRFVLALLDLLAERLPDGTHRTRVDVALSGGSAAQPLGLVLSDPLADAIDWSRVHFWWSD ERFVPAYDTDRNALEARRLLLDQLVANGKLPESNIHEMAADVRSADEIADVMSDADSADDSVRAAADAANDALLDAAARD YGAELIRELGPEPVIDLMILGMGPDGHYASLFPGHDEVKVTDRLTVGVNHSPKMPPLRVSLTAPLIARSRHTWFFAAGAG KAESLAHVFEQPNNPDYPSSYANGVDEFTWFSTEETVTAL
Sequences:
>Translated_280_residues MATRKLIVYPNKDLMIQAGAQRFVLALLDLLAERLPDGTHRTRVDVALSGGSAAQPLGLVLSDPLADAIDWSRVHFWWSD ERFVPAYDTDRNALEARRLLLDQLVANGKLPESNIHEMAADVRSADEIADVMSDADSADDSVRAAADAANDALLDAAARD YGAELIRELGPEPVIDLMILGMGPDGHYASLFPGHDEVKVTDRLTVGVNHSPKMPPLRVSLTAPLIARSRHTWFFAAGAG KAESLAHVFEQPNNPDYPSSYANGVDEFTWFSTEETVTAL >Mature_279_residues ATRKLIVYPNKDLMIQAGAQRFVLALLDLLAERLPDGTHRTRVDVALSGGSAAQPLGLVLSDPLADAIDWSRVHFWWSDE RFVPAYDTDRNALEARRLLLDQLVANGKLPESNIHEMAADVRSADEIADVMSDADSADDSVRAAADAANDALLDAAARDY GAELIRELGPEPVIDLMILGMGPDGHYASLFPGHDEVKVTDRLTVGVNHSPKMPPLRVSLTAPLIARSRHTWFFAAGAGK AESLAHVFEQPNNPDYPSSYANGVDEFTWFSTEETVTAL
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI6912586, Length=264, Percent_Identity=28.7878787878788, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI52145310, Length=204, Percent_Identity=31.3725490196078, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI115533060, Length=280, Percent_Identity=25.3571428571429, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115533058, Length=280, Percent_Identity=25.3571428571429, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321957, Length=242, Percent_Identity=28.5123966942149, Blast_Score=90, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6321687, Length=238, Percent_Identity=28.9915966386555, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6319918, Length=241, Percent_Identity=29.8755186721992, Blast_Score=82, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6324362, Length=236, Percent_Identity=28.3898305084746, Blast_Score=80, Evalue=4e-16, Organism=Drosophila melanogaster, GI24641119, Length=248, Percent_Identity=31.4516129032258, Blast_Score=90, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 30485; Mature: 30354
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRKLIVYPNKDLMIQAGAQRFVLALLDLLAERLPDGTHRTRVDVALSGGSAAQPLGLV CCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHH LSDPLADAIDWSRVHFWWSDERFVPAYDTDRNALEARRLLLDQLVANGKLPESNIHEMAA HCCHHHHHCCCCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH DVRSADEIADVMSDADSADDSVRAAADAANDALLDAAARDYGAELIRELGPEPVIDLMIL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE GMGPDGHYASLFPGHDEVKVTDRLTVGVNHSPKMPPLRVSLTAPLIARSRHTWFFAAGAG EECCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEECCHHHHCCCCCEEEEECCC KAESLAHVFEQPNNPDYPSSYANGVDEFTWFSTEETVTAL CHHHHHHHHHCCCCCCCCCHHHCCCHHHEEECCCCHHCCC >Mature Secondary Structure ATRKLIVYPNKDLMIQAGAQRFVLALLDLLAERLPDGTHRTRVDVALSGGSAAQPLGLV CCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHH LSDPLADAIDWSRVHFWWSDERFVPAYDTDRNALEARRLLLDQLVANGKLPESNIHEMAA HCCHHHHHCCCCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH DVRSADEIADVMSDADSADDSVRAAADAANDALLDAAARDYGAELIRELGPEPVIDLMIL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE GMGPDGHYASLFPGHDEVKVTDRLTVGVNHSPKMPPLRVSLTAPLIARSRHTWFFAAGAG EECCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEECCHHHHCCCCCEEEEECCC KAESLAHVFEQPNNPDYPSSYANGVDEFTWFSTEETVTAL CHHHHHHHHHCCCCCCCCCHHHCCCHHHEEECCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]