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The map label for this gene is rsmE [H]

Identifier: 213159050

GI number: 213159050

Start: 3876685

End: 3877392

Strand: Reverse

Name: rsmE [H]

Synonym: AB57_3759

Alternate gene names: 213159050

Gene position: 3877392-3876685 (Counterclockwise)

Preceding gene: 213159052

Following gene: 213159048

Centisome position: 95.73

GC content: 40.11

Gene sequence:

>708_bases
ATGAATATTGTTTTACTAGAGTCTGAAGATGTTCAATCGGATACATGGTCTATCCATTCAAAACGTCAATTACAGCATTT
GCGTGAACATCTTGAGATTACAGTCGGCCAGAACCTGAAAGTTGGTATTCGAAACGGCGCCCGTTATATCACTGAAATTG
TTTCGATGAATGAGCATGAAGTCCGTATACGGCCTATTCGTGAAGAATTACTACCAGCAAAACTTCCGGTTCATTTAATT
GTAGCTTTACCAAGACCTAAAGTTTTACGCCGTCTAATTATGGACAGTGTGACTTTAGGGGTTGAAAAGATAAGCTTGAT
TCATAGTTATCGTGTTGATAAAAGCTATTGGCAAACTCCTTTTTTACAGCAAATAGACAACTACGCTACGCTGGGACTTG
AGCAAGCAGGCGATACAATTGTTCCTGAAATTCAACTCTATAAACGCTTTAAACCTTTCGTTGAAGACGTCTTGCCAAGT
TTAATAACGCAGGAAACACCTGCCTATGTGGCTCATCCTTATGCTGAGCAGCGTATGCCAATTAATATTAGCCATGCTTG
TAGTGTAGTGGTCGGGCCGGAAGGGGGATTTATTCCTTACGAAGTAGATTTGCTCATAAAAAACGGCTGCCAAGCTATGA
GCTTAGGCAACCGTATTTTAAGAACCGAAACGTCTATTTCTTATATTTTAGGTCGTTTGTTTAGCTGA

Upstream 100 bases:

>100_bases
CTGAACAGTTAGTGGTACAGGCGCATAAAGTGTTGCAACGTAATCAAGGTTCCTTACAAAAACATATCGGGGTGATTAAT
CGCTATCTGGCCGAAAAATC

Downstream 100 bases:

>100_bases
TGTTTCAGGGTTTAAAGCTGGTGGATTAGATACCATTTTTAATTCCTGAATTGGGTAAGGAATATCAATATCATTTTCAT
TGAAAGCTTGTTTTACTTGA

Product: 16S ribosomal RNA methyltransferase RsmE

Products: NA

Alternate protein names: 16S rRNA m3U1498 methyltransferase [H]

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MNIVLLESEDVQSDTWSIHSKRQLQHLREHLEITVGQNLKVGIRNGARYITEIVSMNEHEVRIRPIREELLPAKLPVHLI
VALPRPKVLRRLIMDSVTLGVEKISLIHSYRVDKSYWQTPFLQQIDNYATLGLEQAGDTIVPEIQLYKRFKPFVEDVLPS
LITQETPAYVAHPYAEQRMPINISHACSVVVGPEGGFIPYEVDLLIKNGCQAMSLGNRILRTETSISYILGRLFS

Sequences:

>Translated_235_residues
MNIVLLESEDVQSDTWSIHSKRQLQHLREHLEITVGQNLKVGIRNGARYITEIVSMNEHEVRIRPIREELLPAKLPVHLI
VALPRPKVLRRLIMDSVTLGVEKISLIHSYRVDKSYWQTPFLQQIDNYATLGLEQAGDTIVPEIQLYKRFKPFVEDVLPS
LITQETPAYVAHPYAEQRMPINISHACSVVVGPEGGFIPYEVDLLIKNGCQAMSLGNRILRTETSISYILGRLFS
>Mature_235_residues
MNIVLLESEDVQSDTWSIHSKRQLQHLREHLEITVGQNLKVGIRNGARYITEIVSMNEHEVRIRPIREELLPAKLPVHLI
VALPRPKVLRRLIMDSVTLGVEKISLIHSYRVDKSYWQTPFLQQIDNYATLGLEQAGDTIVPEIQLYKRFKPFVEDVLPS
LITQETPAYVAHPYAEQRMPINISHACSVVVGPEGGFIPYEVDLLIKNGCQAMSLGNRILRTETSISYILGRLFS

Specific function: Specifically methylates the uridine in position 1498 of 16S rRNA in the fully assembled 30S ribosomal subunit [H]

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase RsmE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006700 [H]

Pfam domain/function: PF04452 Methyltrans_RNA [H]

EC number: =2.1.1.193 [H]

Molecular weight: Translated: 26804; Mature: 26804

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVLLESEDVQSDTWSIHSKRQLQHLREHLEITVGQNLKVGIRNGARYITEIVSMNEHE
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCEEEEECCHHHHHHHHHHCCCCE
VRIRPIREELLPAKLPVHLIVALPRPKVLRRLIMDSVTLGVEKISLIHSYRVDKSYWQTP
EEEEECHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCH
FLQQIDNYATLGLEQAGDTIVPEIQLYKRFKPFVEDVLPSLITQETPAYVAHPYAEQRMP
HHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHCCCC
INISHACSVVVGPEGGFIPYEVDLLIKNGCQAMSLGNRILRTETSISYILGRLFS
EEHHHCEEEEECCCCCCCCEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIVLLESEDVQSDTWSIHSKRQLQHLREHLEITVGQNLKVGIRNGARYITEIVSMNEHE
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCEEEEECCHHHHHHHHHHCCCCE
VRIRPIREELLPAKLPVHLIVALPRPKVLRRLIMDSVTLGVEKISLIHSYRVDKSYWQTP
EEEEECHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCH
FLQQIDNYATLGLEQAGDTIVPEIQLYKRFKPFVEDVLPSLITQETPAYVAHPYAEQRMP
HHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHCCCC
INISHACSVVVGPEGGFIPYEVDLLIKNGCQAMSLGNRILRTETSISYILGRLFS
EEHHHCEEEEECCCCCCCCEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]