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The map label for this gene is lrpB [H]

Identifier: 213159046

GI number: 213159046

Start: 3871685

End: 3872098

Strand: Reverse

Name: lrpB [H]

Synonym: AB57_3754

Alternate gene names: 213159046

Gene position: 3872098-3871685 (Counterclockwise)

Preceding gene: 213159048

Following gene: 213159043

Centisome position: 95.6

GC content: 35.75

Gene sequence:

>414_bases
ATGAATATTGAATTAGACCCTATTGATCTAAAAATTATTGCATTGCTTAAGCAAGATTCTCGCTTAACAAATAAAGAAAT
TGGGCAGCGTGTTCATCGGACAGGACAGGCAGTAGGAGCGCGAATTGCTCAGTTAATGGATGCAGGCGTTATTAAAAATT
ACACCATTGCTGTGCAATACAGGCATAAACAATTTATTCATTTGCATTTAAATGAACAGCGCTCCTTTGAAGAAATTGAA
AATTTAGTGAAGCAATATGAACAAATCGATGAGTGCTTTAAAGTTATGGGTAATGCTTGTTATATGATCGTTAGTCATTT
CGAACCAGCAGAACTCAATGCTTTTATTGAAGTCCTCTCAAAATGGTGTCGTTACTCAGTTGAAACTGTCATTCGAGAAG
TAGAGAAAGCTTAA

Upstream 100 bases:

>100_bases
TACTCTTGTTGGTATAAGATAAAACAAGGTTATTCTCTGCCCGCAAAATCGGCTATAGTCCTATGAAAGCATTATCGCCA
GTTTTCTTTCGTTATGAAAA

Downstream 100 bases:

>100_bases
AAAAAATAAAAGCTCCAAGCCGAGTCTTGGAGCCAATATGTCTTTATTTTTATTTATTGTTTTTATTGTCTTGCGCTGTT
TTAACTGGAGGTTTTAGGCT

Product: transcriptional regulator, AsnC/Lrp family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MNIELDPIDLKIIALLKQDSRLTNKEIGQRVHRTGQAVGARIAQLMDAGVIKNYTIAVQYRHKQFIHLHLNEQRSFEEIE
NLVKQYEQIDECFKVMGNACYMIVSHFEPAELNAFIEVLSKWCRYSVETVIREVEKA

Sequences:

>Translated_137_residues
MNIELDPIDLKIIALLKQDSRLTNKEIGQRVHRTGQAVGARIAQLMDAGVIKNYTIAVQYRHKQFIHLHLNEQRSFEEIE
NLVKQYEQIDECFKVMGNACYMIVSHFEPAELNAFIEVLSKWCRYSVETVIREVEKA
>Mature_137_residues
MNIELDPIDLKIIALLKQDSRLTNKEIGQRVHRTGQAVGARIAQLMDAGVIKNYTIAVQYRHKQFIHLHLNEQRSFEEIE
NLVKQYEQIDECFKVMGNACYMIVSHFEPAELNAFIEVLSKWCRYSVETVIREVEKA

Specific function: Negative regulation of glyA transcription and kinB- dependent sporulation [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 15964; Mature: 15964

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS50956 HTH_ASNC_2 ; PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIELDPIDLKIIALLKQDSRLTNKEIGQRVHRTGQAVGARIAQLMDAGVIKNYTIAVQY
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCEEEEEEE
RHKQFIHLHLNEQRSFEEIENLVKQYEQIDECFKVMGNACYMIVSHFEPAELNAFIEVLS
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KWCRYSVETVIREVEKA
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIELDPIDLKIIALLKQDSRLTNKEIGQRVHRTGQAVGARIAQLMDAGVIKNYTIAVQY
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCEEEEEEE
RHKQFIHLHLNEQRSFEEIENLVKQYEQIDECFKVMGNACYMIVSHFEPAELNAFIEVLS
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KWCRYSVETVIREVEKA
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11902725; 9384377 [H]