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The map label for this gene is agmR [H]

Identifier: 213159043

GI number: 213159043

Start: 3868669

End: 3869319

Strand: Reverse

Name: agmR [H]

Synonym: AB57_3751

Alternate gene names: 213159043

Gene position: 3869319-3868669 (Counterclockwise)

Preceding gene: 213159046

Following gene: 213159040

Centisome position: 95.53

GC content: 40.09

Gene sequence:

>651_bases
ATGAATATTTTAATCGTTGATGATCATCCTTTGTTTCGTCATGCTTTGATTCAAGCAGTACGTTATAGCCTGCCGCAGGC
ACAAATTCATGAAACAGCTTCGGTTGATGAGTTTTATGAGCGTTTGGAAAATGGGGCAGAACCTGATCTGGTATTACTCG
ATTTAAACTTACCGGGTGCTTCAGGCTTTTCGGCTCTGGTCTATGTAAGAGCACAATATCCATCTATTCCTATTATTGTG
GTTTCTGCACACGAAGAAGCGTCAATTATTCAACGTGCAATTGCGCATGGTGCAATGGGTTATATTCCTAAATCGGCTCA
TCCAAGTCATATTGGCGAAGCAATCCGTCAAGTGTTAGATGGGGAAATCTGGTTACCGCCAAACTTGCCATCAAATATTA
ATCTTGATCCGAGAGCGGCAGATGAAACTGCTTTGGCTGAACGTATTCAGTCGTTAACGCCTCAACAATTCCGTGTTTTG
ATGATGGTTGCAGAAGGTTTATTAAATAAACAAATTGCTTATGAACTCGATGTTTCAGAGGCTACCATCAAAGCGCACGT
AACGGCTATTTTTAGAAAACTAGGCGTACAAAATCGTACACAGGCTGTATTGGCAATTAGTGCATTAAATATTGAAGATA
AAAAAATCTAA

Upstream 100 bases:

>100_bases
ACAACATTTTGCATAAAAATGGATAAGATGAGCATATCTTTCATCTAAATAGTAGGGTTACAATAGGCCATACTTATGCT
CAAGATTACTTTAATCGCTT

Downstream 100 bases:

>100_bases
AATAAAAAAGACCTCAATTGAGGTCTTTTTTATATGTTCCACTTAGGCAAGGCAATCTTGCTTAGGTGTTAGGCTATCGC
AGTACAGTGGGTTAAGAGCA

Product: two-component system response regulator protein

Products: NA

Alternate protein names: Protein AgmR [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MNILIVDDHPLFRHALIQAVRYSLPQAQIHETASVDEFYERLENGAEPDLVLLDLNLPGASGFSALVYVRAQYPSIPIIV
VSAHEEASIIQRAIAHGAMGYIPKSAHPSHIGEAIRQVLDGEIWLPPNLPSNINLDPRAADETALAERIQSLTPQQFRVL
MMVAEGLLNKQIAYELDVSEATIKAHVTAIFRKLGVQNRTQAVLAISALNIEDKKI

Sequences:

>Translated_216_residues
MNILIVDDHPLFRHALIQAVRYSLPQAQIHETASVDEFYERLENGAEPDLVLLDLNLPGASGFSALVYVRAQYPSIPIIV
VSAHEEASIIQRAIAHGAMGYIPKSAHPSHIGEAIRQVLDGEIWLPPNLPSNINLDPRAADETALAERIQSLTPQQFRVL
MMVAEGLLNKQIAYELDVSEATIKAHVTAIFRKLGVQNRTQAVLAISALNIEDKKI
>Mature_216_residues
MNILIVDDHPLFRHALIQAVRYSLPQAQIHETASVDEFYERLENGAEPDLVLLDLNLPGASGFSALVYVRAQYPSIPIIV
VSAHEEASIIQRAIAHGAMGYIPKSAHPSHIGEAIRQVLDGEIWLPPNLPSNINLDPRAADETALAERIQSLTPQQFRVL
MMVAEGLLNKQIAYELDVSEATIKAHVTAIFRKLGVQNRTQAVLAISALNIEDKKI

Specific function: Positive activator for glycerol metabolism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=205, Percent_Identity=33.1707317073171, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1789937, Length=207, Percent_Identity=26.0869565217391, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1787473, Length=208, Percent_Identity=35.0961538461538, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788222, Length=196, Percent_Identity=25.5102040816327, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1786747, Length=199, Percent_Identity=25.6281407035176, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1788712, Length=197, Percent_Identity=27.9187817258883, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788546, Length=213, Percent_Identity=26.7605633802817, Blast_Score=71, Evalue=4e-14,
Organism=Escherichia coli, GI1790102, Length=199, Percent_Identity=25.1256281407035, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23807; Mature: 23807

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILIVDDHPLFRHALIQAVRYSLPQAQIHETASVDEFYERLENGAEPDLVLLDLNLPGA
CEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECCCCC
SGFSALVYVRAQYPSIPIIVVSAHEEASIIQRAIAHGAMGYIPKSAHPSHIGEAIRQVLD
CCCEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
GEIWLPPNLPSNINLDPRAADETALAERIQSLTPQQFRVLMMVAEGLLNKQIAYELDVSE
CCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHEEEECCCH
ATIKAHVTAIFRKLGVQNRTQAVLAISALNIEDKKI
HHHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCCCC
>Mature Secondary Structure
MNILIVDDHPLFRHALIQAVRYSLPQAQIHETASVDEFYERLENGAEPDLVLLDLNLPGA
CEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECCCCC
SGFSALVYVRAQYPSIPIIVVSAHEEASIIQRAIAHGAMGYIPKSAHPSHIGEAIRQVLD
CCCEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
GEIWLPPNLPSNINLDPRAADETALAERIQSLTPQQFRVLMMVAEGLLNKQIAYELDVSE
CCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHEEEECCCH
ATIKAHVTAIFRKLGVQNRTQAVLAISALNIEDKKI
HHHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938886; 10984043 [H]