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The map label for this gene is yjcH [H]

Identifier: 213159040

GI number: 213159040

Start: 3863451

End: 3863783

Strand: Reverse

Name: yjcH [H]

Synonym: AB57_3748

Alternate gene names: 213159040

Gene position: 3863783-3863451 (Counterclockwise)

Preceding gene: 213159043

Following gene: 213159039

Centisome position: 95.39

GC content: 39.04

Gene sequence:

>333_bases
ATGGATCAAAGCCAAGTAGAACAGATTCTACGTAATCCAAAGTTTCAAAAAATGGTCAAGAAAAAAAGTGCATTAAGCTG
GACGCTCACAATCATCATGTTAGTGCTTTATGTGGGCTTTATGCTACTTGTGGGCTACAACAAAGAATTTTTGATGAGTT
CCTTTAGTGGTGGTGTAACGACATGGGGGATCCCGCTAGGTTTAGGAATTATTGTTTTATCTTTCCTACTTTGTGGTGTG
TATTCCTATATCGCAAATAATACCCTTGACCAATTGAGTGAAGAAGCGTTGAAGGAAGTTGAAGCCATCACGCATGAGAA
AGGACTACACTAA

Upstream 100 bases:

>100_bases
GTCTAAGTTACGACTGAGCTGGAATCTTGCTAACTTTAATAATGAAAAAATACATTAAAAAAAAGTGACCAAGGTTGGGC
ACTATGTAAGGAGTTTGGTT

Downstream 100 bases:

>100_bases
TATGAAATGGAATTCATTAAAAGCGAAAGCCTTATTGGCAGCAGCATCGCTATATTCAACTGTTGCTATGGCAAGCCCGG
ACTTAGGTGAAGCAGAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MDQSQVEQILRNPKFQKMVKKKSALSWTLTIIMLVLYVGFMLLVGYNKEFLMSSFSGGVTTWGIPLGLGIIVLSFLLCGV
YSYIANNTLDQLSEEALKEVEAITHEKGLH

Sequences:

>Translated_110_residues
MDQSQVEQILRNPKFQKMVKKKSALSWTLTIIMLVLYVGFMLLVGYNKEFLMSSFSGGVTTWGIPLGLGIIVLSFLLCGV
YSYIANNTLDQLSEEALKEVEAITHEKGLH
>Mature_110_residues
MDQSQVEQILRNPKFQKMVKKKSALSWTLTIIMLVLYVGFMLLVGYNKEFLMSSFSGGVTTWGIPLGLGIIVLSFLLCGV
YSYIANNTLDQLSEEALKEVEAITHEKGLH

Specific function: Unknown

COG id: COG3162

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790504, Length=103, Percent_Identity=37.8640776699029, Blast_Score=81, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007436 [H]

Pfam domain/function: PF04341 DUF485 [H]

EC number: NA

Molecular weight: Translated: 12329; Mature: 12329

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQSQVEQILRNPKFQKMVKKKSALSWTLTIIMLVLYVGFMLLVGYNKEFLMSSFSGGVT
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCH
TWGIPLGLGIIVLSFLLCGVYSYIANNTLDQLSEEALKEVEAITHEKGLH
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDQSQVEQILRNPKFQKMVKKKSALSWTLTIIMLVLYVGFMLLVGYNKEFLMSSFSGGVT
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCH
TWGIPLGLGIIVLSFLLCGVYSYIANNTLDQLSEEALKEVEAITHEKGLH
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]