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The map label for this gene is rsmE [H]

Identifier: 213158057

GI number: 213158057

Start: 2836403

End: 2837125

Strand: Direct

Name: rsmE [H]

Synonym: AB57_2769

Alternate gene names: 213158057

Gene position: 2836403-2837125 (Clockwise)

Preceding gene: 213158056

Following gene: 213158060

Centisome position: 70.03

GC content: 38.73

Gene sequence:

>723_bases
ATGAATCGTTTTTTTATCGAAACTGAACTTACAGTTGGCTCAACAATTCAACTAACTGAATCAGTCTTCCATCATTGGGT
ACGTGTTTTACGCGCACAATTACAAGAACAAGCCACACTATTTAATGGGCAAGGTGGTGAGTATCTCGCGACATTGACCG
AAATTAATAAAAAAAATGCGTTTGTCACTATTGAGAATTTTAATCCTGTAAACCGTAATGCTCCATTTAAAGCCCTTCTT
GGTCAGGTCATGAGTAAAGGTGACCGAATGGATTATGCCATTCAGAAAGCAACTGAACTTGGCGTCAGTAAGATTCAGCT
CTTGACCAGTGAACGTTGCGAAATGCGTTTGAAATACGACCGCGATCAAAAAAAATTAGATCATTGGCAAGCTGTTGCAA
TTGCAGCATGTGAGCAATGTGGACTCAATTTAGTTCCAGAAGTTCTAGCACCTATTGCTCTTCATGAATGGTTAAACTCA
TCTGACCTTCCTGTATCTAAATTTGTTTTGGCTCCTGAAAAAGAGCAAAAAGATGTATTGGCAGGGATACAACCTGAACT
AGCCCTCTTAATTGGTCCTGAGGGTGGTTTAAGTGAAAATGAAATTACGCAAGCCAATCAAGCTGGATTTATGAACTGGT
GTATTGGGGACCGTATATTACGTACTGAAACTGCACCTGTTGTAGCATTATCTATTTTAAATTATCGGTTTTTATCCATA
TAA

Upstream 100 bases:

>100_bases
TGGTGCACCAAGCTTACACTTCTACTCAATGAACCAAGTCGAACCAACTCGTCAGCTTGTTGTTGACCTTGGTTTAAATT
AATTTTGTAAGGCGTACCCA

Downstream 100 bases:

>100_bases
ACTTATTGAACATTGATTAAATCAACAATTAAAGTTAACTTACTTTTACGGTATGAATATTAATTTAAATTTTTTTCCAC
TGATAAATCAGATTCTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA m3U1498 methyltransferase [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MNRFFIETELTVGSTIQLTESVFHHWVRVLRAQLQEQATLFNGQGGEYLATLTEINKKNAFVTIENFNPVNRNAPFKALL
GQVMSKGDRMDYAIQKATELGVSKIQLLTSERCEMRLKYDRDQKKLDHWQAVAIAACEQCGLNLVPEVLAPIALHEWLNS
SDLPVSKFVLAPEKEQKDVLAGIQPELALLIGPEGGLSENEITQANQAGFMNWCIGDRILRTETAPVVALSILNYRFLSI

Sequences:

>Translated_240_residues
MNRFFIETELTVGSTIQLTESVFHHWVRVLRAQLQEQATLFNGQGGEYLATLTEINKKNAFVTIENFNPVNRNAPFKALL
GQVMSKGDRMDYAIQKATELGVSKIQLLTSERCEMRLKYDRDQKKLDHWQAVAIAACEQCGLNLVPEVLAPIALHEWLNS
SDLPVSKFVLAPEKEQKDVLAGIQPELALLIGPEGGLSENEITQANQAGFMNWCIGDRILRTETAPVVALSILNYRFLSI
>Mature_240_residues
MNRFFIETELTVGSTIQLTESVFHHWVRVLRAQLQEQATLFNGQGGEYLATLTEINKKNAFVTIENFNPVNRNAPFKALL
GQVMSKGDRMDYAIQKATELGVSKIQLLTSERCEMRLKYDRDQKKLDHWQAVAIAACEQCGLNLVPEVLAPIALHEWLNS
SDLPVSKFVLAPEKEQKDVLAGIQPELALLIGPEGGLSENEITQANQAGFMNWCIGDRILRTETAPVVALSILNYRFLSI

Specific function: Specifically methylates the uridine in position 1498 of 16S rRNA in the fully assembled 30S ribosomal subunit [H]

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase RsmE family [H]

Homologues:

Organism=Escherichia coli, GI87082186, Length=236, Percent_Identity=40.2542372881356, Blast_Score=159, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015947
- InterPro:   IPR006700 [H]

Pfam domain/function: PF04452 Methyltrans_RNA [H]

EC number: =2.1.1.193 [H]

Molecular weight: Translated: 26899; Mature: 26899

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFFIETELTVGSTIQLTESVFHHWVRVLRAQLQEQATLFNGQGGEYLATLTEINKKNA
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
FVTIENFNPVNRNAPFKALLGQVMSKGDRMDYAIQKATELGVSKIQLLTSERCEMRLKYD
EEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
RDQKKLDHWQAVAIAACEQCGLNLVPEVLAPIALHEWLNSSDLPVSKFVLAPEKEQKDVL
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHEEECCCCHHHHHH
AGIQPELALLIGPEGGLSENEITQANQAGFMNWCIGDRILRTETAPVVALSILNYRFLSI
HCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRFFIETELTVGSTIQLTESVFHHWVRVLRAQLQEQATLFNGQGGEYLATLTEINKKNA
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
FVTIENFNPVNRNAPFKALLGQVMSKGDRMDYAIQKATELGVSKIQLLTSERCEMRLKYD
EEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
RDQKKLDHWQAVAIAACEQCGLNLVPEVLAPIALHEWLNSSDLPVSKFVLAPEKEQKDVL
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHEEECCCCHHHHHH
AGIQPELALLIGPEGGLSENEITQANQAGFMNWCIGDRILRTETAPVVALSILNYRFLSI
HCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]