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The map label for this gene is oprB [H]

Identifier: 213157865

GI number: 213157865

Start: 3456920

End: 3458173

Strand: Reverse

Name: oprB [H]

Synonym: AB57_3353

Alternate gene names: 213157865

Gene position: 3458173-3456920 (Counterclockwise)

Preceding gene: 213157866

Following gene: 213157864

Centisome position: 85.38

GC content: 40.59

Gene sequence:

>1254_bases
ATGAAAACGCATAAATCTTTGATGGTTTCCTGTTTATCCGTTTTATCAATTACTCTTTTTGTTCAGCATGCACAAGCTGC
TGCTGCATTTGACCCAAATGGTTCTTGGATGTTGGGTGATTGGAACGGGCAACGTACAGCGTTGCAAGCACAAGGTTATG
ATTTTTCTTTTGGATATACCGGTGAATATGCCGGTATTTTAGATTCCAAACAAACATCTACACACGGTAGTGCTTATACA
GGGCAACTTGCTTTAGGTTCTCATTTGGACCTAGGTAAAATTTTAGGGTGGCAAGATACAGAAGCTCAAATCACATTAAC
TTATCGTGATGGGCAATCGCTTTCTGAACATTCTCCAGCATTGGCTGGGCACCAAAGTTCTGTTCAAGAAGTGTGGGGCC
GTGAACAAACTTGGCGTTTAACAGATTTATGGATCAAGAAAAAATTCCTTGATCAGAAGTTAGATGTTAAAGTGGGCCGT
TTTGGTGAGGGTGAAGACTTTAATAGTTTTGACTGTGATTTCCAGAACTTGGCACTTTGTGGTTCACAAGTGGGTAACTG
GGTAGGCGATCAGTGGTATAACTGGCCAGTTAGCCAATGGGCAATGCGTGTCAAATATAACTTGCAACCTGATTTATATA
CACAAGTGGGTGTATATGAATATAACCCTGAAAACTTGGAACGTGGCAAAGGCTTCAACCTAAGTACAGATGGTTCTCAC
GGTGCAATTATTCCAGCAGAAGTAGTTTGGTCACCTAAATTAGGTGTGCAAAGCATGCCTGGTGAATACCGTTTAGGTTA
TTACTATAGTACTGCCGATGCCAAAGAAATTGCAGATTCAACTAAAACATCTCATAAGCAAGGTGTTTGGGTAACTGCAA
AACAGAAATTATTCCAGCCAGCTGATCAAACTGACCGTGGTTTAACAGGGTTTGTGAACCTGACTTTCCACGACTCAGAT
ACCAACAAAGTTGATAACATGCAAAATATAGGCTTAGTCTATAAAGGTTTGCTCAATCAACGTCCTCAAGATGAGTTGGC
ACTTGGTGTTGCTCGTATCCATATCAATGATGATTGGAACGATGTTCAAGCCAAAGAATACGACACCGAATATAATACCG
AGCTTTACTATGGTATTCATGCCACTAACTGGCTAACTATTCGTCCAAATGTGCAATATGTTCGTCATGTTGGTGCATTA
AAAAATGGTGATAACACTTGGGTAGGCGGTATTAAGTTCTCAACTGCATTCTAA

Upstream 100 bases:

>100_bases
AAATTATTATCTGAATAATCAATTGATTAACATTTTGAATAATTTCTTTACATAAAATTAGCGTAACCTTTATAAACAAA
GACATAAAAGGTTCGTAAAC

Downstream 100 bases:

>100_bases
GTAATTATTCCGAAAACGGATTGTCGAGGGCTAAATCATTGATTGAAGTATCCTGACCTTCCGTTTTTTTCTTTATGCCT
GAATTTTGTTTTAGACGTAT

Product: porin B

Products: NA

Alternate protein names: Glucose porin; Outer membrane protein D1 [H]

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MKTHKSLMVSCLSVLSITLFVQHAQAAAAFDPNGSWMLGDWNGQRTALQAQGYDFSFGYTGEYAGILDSKQTSTHGSAYT
GQLALGSHLDLGKILGWQDTEAQITLTYRDGQSLSEHSPALAGHQSSVQEVWGREQTWRLTDLWIKKKFLDQKLDVKVGR
FGEGEDFNSFDCDFQNLALCGSQVGNWVGDQWYNWPVSQWAMRVKYNLQPDLYTQVGVYEYNPENLERGKGFNLSTDGSH
GAIIPAEVVWSPKLGVQSMPGEYRLGYYYSTADAKEIADSTKTSHKQGVWVTAKQKLFQPADQTDRGLTGFVNLTFHDSD
TNKVDNMQNIGLVYKGLLNQRPQDELALGVARIHINDDWNDVQAKEYDTEYNTELYYGIHATNWLTIRPNVQYVRHVGAL
KNGDNTWVGGIKFSTAF

Sequences:

>Translated_417_residues
MKTHKSLMVSCLSVLSITLFVQHAQAAAAFDPNGSWMLGDWNGQRTALQAQGYDFSFGYTGEYAGILDSKQTSTHGSAYT
GQLALGSHLDLGKILGWQDTEAQITLTYRDGQSLSEHSPALAGHQSSVQEVWGREQTWRLTDLWIKKKFLDQKLDVKVGR
FGEGEDFNSFDCDFQNLALCGSQVGNWVGDQWYNWPVSQWAMRVKYNLQPDLYTQVGVYEYNPENLERGKGFNLSTDGSH
GAIIPAEVVWSPKLGVQSMPGEYRLGYYYSTADAKEIADSTKTSHKQGVWVTAKQKLFQPADQTDRGLTGFVNLTFHDSD
TNKVDNMQNIGLVYKGLLNQRPQDELALGVARIHINDDWNDVQAKEYDTEYNTELYYGIHATNWLTIRPNVQYVRHVGAL
KNGDNTWVGGIKFSTAF
>Mature_417_residues
MKTHKSLMVSCLSVLSITLFVQHAQAAAAFDPNGSWMLGDWNGQRTALQAQGYDFSFGYTGEYAGILDSKQTSTHGSAYT
GQLALGSHLDLGKILGWQDTEAQITLTYRDGQSLSEHSPALAGHQSSVQEVWGREQTWRLTDLWIKKKFLDQKLDVKVGR
FGEGEDFNSFDCDFQNLALCGSQVGNWVGDQWYNWPVSQWAMRVKYNLQPDLYTQVGVYEYNPENLERGKGFNLSTDGSH
GAIIPAEVVWSPKLGVQSMPGEYRLGYYYSTADAKEIADSTKTSHKQGVWVTAKQKLFQPADQTDRGLTGFVNLTFHDSD
TNKVDNMQNIGLVYKGLLNQRPQDELALGVARIHINDDWNDVQAKEYDTEYNTELYYGIHATNWLTIRPNVQYVRHVGAL
KNGDNTWVGGIKFSTAF

Specific function: Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of gluc

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 46846; Mature: 46846

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTHKSLMVSCLSVLSITLFVQHAQAAAAFDPNGSWMLGDWNGQRTALQAQGYDFSFGYT
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCCCEEEEEECCCEEECCCC
GEYAGILDSKQTSTHGSAYTGQLALGSHLDLGKILGWQDTEAQITLTYRDGQSLSEHSPA
CCCCCCCCCCCCCCCCCEEECEEEECCCCCHHHHCCCCCCCEEEEEEEECCCCCHHCCCC
LAGHQSSVQEVWGREQTWRLTDLWIKKKFLDQKLDVKVGRFGEGEDFNSFDCDFQNLALC
CCCCHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHH
GSQVGNWVGDQWYNWPVSQWAMRVKYNLQPDLYTQVGVYEYNPENLERGKGFNLSTDGSH
HHHHCCHHCCCCCCCCHHHEEEEEEECCCCCCEEEEEEEEECCCHHHCCCCCCCCCCCCC
GAIIPAEVVWSPKLGVQSMPGEYRLGYYYSTADAKEIADSTKTSHKQGVWVTAKQKLFQP
CCEEEHHEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEEEHHHHCCC
ADQTDRGLTGFVNLTFHDSDTNKVDNMQNIGLVYKGLLNQRPQDELALGVARIHINDDWN
CCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHEEEEEEEEECCCCC
DVQAKEYDTEYNTELYYGIHATNWLTIRPNVQYVRHVGALKNGDNTWVGGIKFSTAF
CCCCCCCCCCCCCEEEEEEEECEEEEECCCHHHHHHHHHHCCCCCEEECCEEEEECC
>Mature Secondary Structure
MKTHKSLMVSCLSVLSITLFVQHAQAAAAFDPNGSWMLGDWNGQRTALQAQGYDFSFGYT
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCCCEEEEEECCCEEECCCC
GEYAGILDSKQTSTHGSAYTGQLALGSHLDLGKILGWQDTEAQITLTYRDGQSLSEHSPA
CCCCCCCCCCCCCCCCCEEECEEEECCCCCHHHHCCCCCCCEEEEEEEECCCCCHHCCCC
LAGHQSSVQEVWGREQTWRLTDLWIKKKFLDQKLDVKVGRFGEGEDFNSFDCDFQNLALC
CCCCHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHH
GSQVGNWVGDQWYNWPVSQWAMRVKYNLQPDLYTQVGVYEYNPENLERGKGFNLSTDGSH
HHHHCCHHCCCCCCCCHHHEEEEEEECCCCCCEEEEEEEEECCCHHHCCCCCCCCCCCCC
GAIIPAEVVWSPKLGVQSMPGEYRLGYYYSTADAKEIADSTKTSHKQGVWVTAKQKLFQP
CCEEEHHEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEEEHHHHCCC
ADQTDRGLTGFVNLTFHDSDTNKVDNMQNIGLVYKGLLNQRPQDELALGVARIHINDDWN
CCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHEEEEEEEEECCCCC
DVQAKEYDTEYNTELYYGIHATNWLTIRPNVQYVRHVGALKNGDNTWVGGIKFSTAF
CCCCCCCCCCCCCEEEEEEEECEEEEECCCHHHHHHHHHHCCCCCEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125108; 10984043; 2450582; 8132494; 7768797 [H]