| Definition | Acinetobacter baumannii AB0057, complete genome. |
|---|---|
| Accession | NC_011586 |
| Length | 4,050,513 |
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The map label for this gene is gdhA [H]
Identifier: 213157864
GI number: 213157864
Start: 3454341
End: 3456746
Strand: Reverse
Name: gdhA [H]
Synonym: AB57_3351
Alternate gene names: 213157864
Gene position: 3456746-3454341 (Counterclockwise)
Preceding gene: 213157865
Following gene: 213157863
Centisome position: 85.34
GC content: 41.44
Gene sequence:
>2406_bases ATGAATCAACCTTCTTCAAGATCAGGTTTAACGACTTTTACCGTAATTATTATTGGGTTATTGGCGTTATTCCTGCTAAT TGGAGGTATTTGGCTCGCTACACTAGGCGGTTCAATTTACTATATTGTAGCTGGAGTCTTACTTCTCATTGTTGCATGGC AACTCTACAAGCGCGCTTCTGCTGCTTTGTGGGTTTATGCCGCATTAATGCTAGGTACTATTATCTGGAGTGTCTGGGAA GTTGGAACAGACTTTTGGGCGCTTGCACCACGTTTAGATATTTTAGGTATTCTTGGTTTATGGTTATTGGTTCCGGCTGT AACTCGTGGAATCAACAACCTTGGATCAAGTAAAGTTGCCTTATCTTCAACTTTAGCAATTGCAATCGTGTTGATGGTTT ATTCTATCTTCAATGATCCGCAAGAAATTAATGGTGAAATCAAGACACCTCAACCAGAAACTGCTCAAGCCGTTCCGGGC GTTGCAGAGAGCGACTGGCCTGCTTATGGTCGTACTCAAGCTGGTGAACGTTATTCTCCATTGAAACAGATTAATGACCA GAACGTAAAAGATCTGAAAGTTGCCTGGACATTCCGTACTGGTGATTTCAAAACAGATAATGACTCTGGCGAAACAACCA ATCAGGTTACACCAATTAAAATTGGTAATAACATGTTTATCTGTACGGCTCACCAGCAATTAATTGCGATTGACCCAGCT ACAGGTAAGGAAAAATGGCGTTTTGATCCGAAGCTTAAAACGGATAAATCGTTCCAGCATTTAACTTGTCGTGGTGTAAT GTATTACGATGCAAACAACACAACTGAATTTGCGACAAGCTTACAAACTAAAAAGTCGACTTCAACTCAATGTCCACGTA AAGTCTTTGTTCCAGTCAATGATGGACGTTTAGTTGCTGTAAATGCTGACACAGGTAAAGCATGTACTGACTTTGGTCAA AATGGTGAAGTGAATTTACAAGAATTCATGCCATATGCTTATCCAGGTGGTTATAACCCAACATCTCCAGGTGTTGTTAC TGGTTCAACAGTGGTTATTGCCGGTTCAGTTACCGACAACTATTCAAATAAAGAGCCATCAGGTGTTATCCGTGGATATG ACGTAAACACTGGTAAGCTTCTTTGGGTATTTGATACTGGTGCAGCAGATCCAAATGCAATGCCAGGTGAAGGTACAACC TTTGTTCATAACTCACCAAATGCTTGGGCACCTTTAGCATACGATGCCAAACTTGATATCGTTTATGTTCCAACAGGTGT AGGTACTCCAGATATCTGGGGTGGTGACCGTACCGAGTTGAAAGAACGTTATGCGAACTCTATGTTAGCGATTAACGCTT CAACAGGTAAATTGATTTGGAACTTCCAGACAACCCATCACGATTTATGGGATATGGACGTACCGTCACAACCATCTTTG GCAGATATTAAAGACAAATCTGGTAAAACTGTTCCAGCAATTTATGTCTTGACCAAAACAGGTAATGCCTTTGTTCTTGA TCGTCGTAATGGTCAGCCAATTGTTCCTGTAACTGAGAAACCAGTTCCACAAACAGTTAAACGCGGACCACAGACTAAAG GCGAGCATTATTCAAAAACTCAGCCATTCTCTGATTTGAACTTGGCACCACAAGATAAATTGACTGATAAAGATATGTGG GGTGCCACTATGCTTGATCAGCTTATGTGTCGTGTGTCTTTCAAACGCCTCAATTACGATGGTATTTATACGCCACCATC TGAAAACGGTACTTTAGTTTTCCCTGGTAACTTAGGTGTGTTTGAATGGGGCGGTATGTCAGTTAACCCTGACCGTCAAG TTGCTGTAATGAACCCGATTGGTTTGCCATTCGTGAGTCGTTTAATTCCTGCTGATCCAAACCGTGCGCAAACTGCAAAA GGTGCGGGAACTGAGCAGGGTGTACAGCCAATGTATGGCGTACCTTATGGTGTTGAAATCAGCGCATTCTTATCTCCACT TGGTTTACCTTGTAAACAACCTGCTTGGGGATATGTTGCTGGTGTAGATTTGAAAACTCATGAAGTCGTTTGGAAAAAAC GTATTGGTACAATTCGTGACAGTTTACCGAACTTGTTCCAGTTACCAGCTGTAAAAATTGGTGTTCCTGGTTTAGGTGGT TCTATTTCTACCGCAGGTAATGTCATGTTTGTTGGTGCAACTCAAGATAACTACATCCGTGCGTTTAACGTAACGAATGG TGAGAAACTTTGGGAAGCACGTTTACCAGCAGGTGGACAAGCAACACCAATGACTTATGAAATTAATGGTAAACAATATG TTGTAATTATGGCCGGTGGTCATGGTTCATTTGGTACAAAAATGGGCGACTATTTAGTGGCTTATGCATTACCAGATAAC AAATAA
Upstream 100 bases:
>100_bases TATGCCTGAATTTTGTTTTAGACGTATTGGTGATGTCATTTTTCTATAAGTTTTTTGGCACATCTTTCCGATAAAAATGA TGATTGATAAGAGGTGGTTT
Downstream 100 bases:
>100_bases AAGTTTGCTATCAAAAAAGCCCGGATTTATCTGGGCTTTTTTTATGTCAATTTAGATTAAAGCTTATCAATAAAACCGTT ATTAAATATGCAAAAAAAGC
Product: glucose dehydrogenase
Products: NA
Alternate protein names: GDH-A; Glucose dehydrogenase A [pyrroloquinoline-quinone]; Quinoprotein glucose DH [H]
Number of amino acids: Translated: 801; Mature: 801
Protein sequence:
>801_residues MNQPSSRSGLTTFTVIIIGLLALFLLIGGIWLATLGGSIYYIVAGVLLLIVAWQLYKRASAALWVYAALMLGTIIWSVWE VGTDFWALAPRLDILGILGLWLLVPAVTRGINNLGSSKVALSSTLAIAIVLMVYSIFNDPQEINGEIKTPQPETAQAVPG VAESDWPAYGRTQAGERYSPLKQINDQNVKDLKVAWTFRTGDFKTDNDSGETTNQVTPIKIGNNMFICTAHQQLIAIDPA TGKEKWRFDPKLKTDKSFQHLTCRGVMYYDANNTTEFATSLQTKKSTSTQCPRKVFVPVNDGRLVAVNADTGKACTDFGQ NGEVNLQEFMPYAYPGGYNPTSPGVVTGSTVVIAGSVTDNYSNKEPSGVIRGYDVNTGKLLWVFDTGAADPNAMPGEGTT FVHNSPNAWAPLAYDAKLDIVYVPTGVGTPDIWGGDRTELKERYANSMLAINASTGKLIWNFQTTHHDLWDMDVPSQPSL ADIKDKSGKTVPAIYVLTKTGNAFVLDRRNGQPIVPVTEKPVPQTVKRGPQTKGEHYSKTQPFSDLNLAPQDKLTDKDMW GATMLDQLMCRVSFKRLNYDGIYTPPSENGTLVFPGNLGVFEWGGMSVNPDRQVAVMNPIGLPFVSRLIPADPNRAQTAK GAGTEQGVQPMYGVPYGVEISAFLSPLGLPCKQPAWGYVAGVDLKTHEVVWKKRIGTIRDSLPNLFQLPAVKIGVPGLGG SISTAGNVMFVGATQDNYIRAFNVTNGEKLWEARLPAGGQATPMTYEINGKQYVVIMAGGHGSFGTKMGDYLVAYALPDN K
Sequences:
>Translated_801_residues MNQPSSRSGLTTFTVIIIGLLALFLLIGGIWLATLGGSIYYIVAGVLLLIVAWQLYKRASAALWVYAALMLGTIIWSVWE VGTDFWALAPRLDILGILGLWLLVPAVTRGINNLGSSKVALSSTLAIAIVLMVYSIFNDPQEINGEIKTPQPETAQAVPG VAESDWPAYGRTQAGERYSPLKQINDQNVKDLKVAWTFRTGDFKTDNDSGETTNQVTPIKIGNNMFICTAHQQLIAIDPA TGKEKWRFDPKLKTDKSFQHLTCRGVMYYDANNTTEFATSLQTKKSTSTQCPRKVFVPVNDGRLVAVNADTGKACTDFGQ NGEVNLQEFMPYAYPGGYNPTSPGVVTGSTVVIAGSVTDNYSNKEPSGVIRGYDVNTGKLLWVFDTGAADPNAMPGEGTT FVHNSPNAWAPLAYDAKLDIVYVPTGVGTPDIWGGDRTELKERYANSMLAINASTGKLIWNFQTTHHDLWDMDVPSQPSL ADIKDKSGKTVPAIYVLTKTGNAFVLDRRNGQPIVPVTEKPVPQTVKRGPQTKGEHYSKTQPFSDLNLAPQDKLTDKDMW GATMLDQLMCRVSFKRLNYDGIYTPPSENGTLVFPGNLGVFEWGGMSVNPDRQVAVMNPIGLPFVSRLIPADPNRAQTAK GAGTEQGVQPMYGVPYGVEISAFLSPLGLPCKQPAWGYVAGVDLKTHEVVWKKRIGTIRDSLPNLFQLPAVKIGVPGLGG SISTAGNVMFVGATQDNYIRAFNVTNGEKLWEARLPAGGQATPMTYEINGKQYVVIMAGGHGSFGTKMGDYLVAYALPDN K >Mature_801_residues MNQPSSRSGLTTFTVIIIGLLALFLLIGGIWLATLGGSIYYIVAGVLLLIVAWQLYKRASAALWVYAALMLGTIIWSVWE VGTDFWALAPRLDILGILGLWLLVPAVTRGINNLGSSKVALSSTLAIAIVLMVYSIFNDPQEINGEIKTPQPETAQAVPG VAESDWPAYGRTQAGERYSPLKQINDQNVKDLKVAWTFRTGDFKTDNDSGETTNQVTPIKIGNNMFICTAHQQLIAIDPA TGKEKWRFDPKLKTDKSFQHLTCRGVMYYDANNTTEFATSLQTKKSTSTQCPRKVFVPVNDGRLVAVNADTGKACTDFGQ NGEVNLQEFMPYAYPGGYNPTSPGVVTGSTVVIAGSVTDNYSNKEPSGVIRGYDVNTGKLLWVFDTGAADPNAMPGEGTT FVHNSPNAWAPLAYDAKLDIVYVPTGVGTPDIWGGDRTELKERYANSMLAINASTGKLIWNFQTTHHDLWDMDVPSQPSL ADIKDKSGKTVPAIYVLTKTGNAFVLDRRNGQPIVPVTEKPVPQTVKRGPQTKGEHYSKTQPFSDLNLAPQDKLTDKDMW GATMLDQLMCRVSFKRLNYDGIYTPPSENGTLVFPGNLGVFEWGGMSVNPDRQVAVMNPIGLPFVSRLIPADPNRAQTAK GAGTEQGVQPMYGVPYGVEISAFLSPLGLPCKQPAWGYVAGVDLKTHEVVWKKRIGTIRDSLPNLFQLPAVKIGVPGLGG SISTAGNVMFVGATQDNYIRAFNVTNGEKLWEARLPAGGQATPMTYEINGKQYVVIMAGGHGSFGTKMGDYLVAYALPDN K
Specific function: Catalyzes an exceptionally high rate of oxidation of a wide range of aldose sugars, including D-glucose, galactose, arabinose and xylose, and also the disaccharides lactose, cellobiose and maltose [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial PQQ dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=806, Percent_Identity=59.9255583126551, Blast_Score=974, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017511 - InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.99.35 [H]
Molecular weight: Translated: 86986; Mature: 86986
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: PS00363 BACTERIAL_PQQ_1 ; PS00364 BACTERIAL_PQQ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQPSSRSGLTTFTVIIIGLLALFLLIGGIWLATLGGSIYYIVAGVLLLIVAWQLYKRAS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AALWVYAALMLGTIIWSVWEVGTDFWALAPRLDILGILGLWLLVPAVTRGINNLGSSKVA HHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LSSTLAIAIVLMVYSIFNDPQEINGEIKTPQPETAQAVPGVAESDWPAYGRTQAGERYSP HHHHHHHHHHHHHHHHHCCHHHHCCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCH LKQINDQNVKDLKVAWTFRTGDFKTDNDSGETTNQVTPIKIGNNMFICTAHQQLIAIDPA HHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCEEEEECCC TGKEKWRFDPKLKTDKSFQHLTCRGVMYYDANNTTEFATSLQTKKSTSTQCPRKVFVPVN CCCCCEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEC DGRLVAVNADTGKACTDFGQNGEVNLQEFMPYAYPGGYNPTSPGVVTGSTVVIAGSVTDN CCEEEEEECCCCCHHHHCCCCCCEEHHHCCCCCCCCCCCCCCCCEEECCEEEEEECCCCC YSNKEPSGVIRGYDVNTGKLLWVFDTGAADPNAMPGEGTTFVHNSPNAWAPLAYDAKLDI CCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEECCEEEE VYVPTGVGTPDIWGGDRTELKERYANSMLAINASTGKLIWNFQTTHHDLWDMDVPSQPSL EEEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCC ADIKDKSGKTVPAIYVLTKTGNAFVLDRRNGQPIVPVTEKPVPQTVKRGPQTKGEHYSKT CCCCCCCCCEEEEEEEEEECCCEEEEECCCCCEEECCCCCCCCHHHHCCCCCCCCCCCCC QPFSDLNLAPQDKLTDKDMWGATMLDQLMCRVSFKRLNYDGIYTPPSENGTLVFPGNLGV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCE FEWGGMSVNPDRQVAVMNPIGLPFVSRLIPADPNRAQTAKGAGTEQGVQPMYGVPYGVEI EECCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH SAFLSPLGLPCKQPAWGYVAGVDLKTHEVVWKKRIGTIRDSLPNLFQLPAVKIGVPGLGG HHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCC SISTAGNVMFVGATQDNYIRAFNVTNGEKLWEARLPAGGQATPMTYEINGKQYVVIMAGG CCCCCCCEEEEECCCCCEEEEEECCCCHHHHHCCCCCCCCCCCEEEEECCCEEEEEEECC HGSFGTKMGDYLVAYALPDNK CCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure MNQPSSRSGLTTFTVIIIGLLALFLLIGGIWLATLGGSIYYIVAGVLLLIVAWQLYKRAS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AALWVYAALMLGTIIWSVWEVGTDFWALAPRLDILGILGLWLLVPAVTRGINNLGSSKVA HHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LSSTLAIAIVLMVYSIFNDPQEINGEIKTPQPETAQAVPGVAESDWPAYGRTQAGERYSP HHHHHHHHHHHHHHHHHCCHHHHCCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCH LKQINDQNVKDLKVAWTFRTGDFKTDNDSGETTNQVTPIKIGNNMFICTAHQQLIAIDPA HHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCEEEEECCC TGKEKWRFDPKLKTDKSFQHLTCRGVMYYDANNTTEFATSLQTKKSTSTQCPRKVFVPVN CCCCCEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEC DGRLVAVNADTGKACTDFGQNGEVNLQEFMPYAYPGGYNPTSPGVVTGSTVVIAGSVTDN CCEEEEEECCCCCHHHHCCCCCCEEHHHCCCCCCCCCCCCCCCCEEECCEEEEEECCCCC YSNKEPSGVIRGYDVNTGKLLWVFDTGAADPNAMPGEGTTFVHNSPNAWAPLAYDAKLDI CCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEECCEEEE VYVPTGVGTPDIWGGDRTELKERYANSMLAINASTGKLIWNFQTTHHDLWDMDVPSQPSL EEEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCC ADIKDKSGKTVPAIYVLTKTGNAFVLDRRNGQPIVPVTEKPVPQTVKRGPQTKGEHYSKT CCCCCCCCCEEEEEEEEEECCCEEEEECCCCCEEECCCCCCCCHHHHCCCCCCCCCCCCC QPFSDLNLAPQDKLTDKDMWGATMLDQLMCRVSFKRLNYDGIYTPPSENGTLVFPGNLGV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCE FEWGGMSVNPDRQVAVMNPIGLPFVSRLIPADPNRAQTAKGAGTEQGVQPMYGVPYGVEI EECCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH SAFLSPLGLPCKQPAWGYVAGVDLKTHEVVWKKRIGTIRDSLPNLFQLPAVKIGVPGLGG HHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCC SISTAGNVMFVGATQDNYIRAFNVTNGEKLWEARLPAGGQATPMTYEINGKQYVVIMAGG CCCCCCCEEEEECCCCCEEEEEECCCCHHHHHCCCCCCCCCCCEEEEECCCEEEEEEECC HGSFGTKMGDYLVAYALPDNK CCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3399393 [H]