Click here to switch to the map view.

The map label for this gene is ybeD [C]

Identifier: 213157660

GI number: 213157660

Start: 3263034

End: 3263321

Strand: Direct

Name: ybeD [C]

Synonym: AB57_3138

Alternate gene names: 213157660

Gene position: 3263034-3263321 (Clockwise)

Preceding gene: 213157659

Following gene: 213157661

Centisome position: 80.56

GC content: 41.32

Gene sequence:

>288_bases
ATGTTAGACCGCACTCCATCTCGCGAACTCCGTGAAGACCTTTGGGTATTTCCAATGGACTATCCAATTAAACTCATTGG
CGATGCGGGTGAAGAATTACGTATAGCTGTTGTTGATATTCTAGTGAAACATTTTCCTGACTTTGACCAAACAACGTTAA
AAGTACAAGAATCACGTACAGGCAAATACCATTCATTAACCGCGCAATTACGCTTTGATGAATTGGAACAAGTGCATGCT
TTGTATGCAGACTTGGCTGCTTGTCCGCAAATAAGAACTGCGCTTTAA

Upstream 100 bases:

>100_bases
TAATTTTTGAAATCTTGAAATTTCGAGACTAGTCCCCATTTAATAGAAAGAGCTATAAACGCCTGCGATGATGCAGGCGT
TTCACATGATGAGGTTACTT

Downstream 100 bases:

>100_bases
TTTTAAAATGCCATGACAAATTTAATGTCATGGCATTTTTATTTATACCAATCTTTATAGAAATAATTACAAATATTTAG
AACCGTTTAGGCAAAATACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MLDRTPSRELREDLWVFPMDYPIKLIGDAGEELRIAVVDILVKHFPDFDQTTLKVQESRTGKYHSLTAQLRFDELEQVHA
LYADLAACPQIRTAL

Sequences:

>Translated_95_residues
MLDRTPSRELREDLWVFPMDYPIKLIGDAGEELRIAVVDILVKHFPDFDQTTLKVQESRTGKYHSLTAQLRFDELEQVHA
LYADLAACPQIRTAL
>Mature_95_residues
MLDRTPSRELREDLWVFPMDYPIKLIGDAGEELRIAVVDILVKHFPDFDQTTLKVQESRTGKYHSLTAQLRFDELEQVHA
LYADLAACPQIRTAL

Specific function: Unknown

COG id: COG2921

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0250 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007454 [H]

Pfam domain/function: PF04359 DUF493 [H]

EC number: NA

Molecular weight: Translated: 10971; Mature: 10971

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRTPSRELREDLWVFPMDYPIKLIGDAGEELRIAVVDILVKHFPDFDQTTLKVQESRT
CCCCCCCHHHHHHHEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC
GKYHSLTAQLRFDELEQVHALYADLAACPQIRTAL
CCEEEHEEEECHHHHHHHHHHHHHHHHCCHHHHCC
>Mature Secondary Structure
MLDRTPSRELREDLWVFPMDYPIKLIGDAGEELRIAVVDILVKHFPDFDQTTLKVQESRT
CCCCCCCHHHHHHHEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC
GKYHSLTAQLRFDELEQVHALYADLAACPQIRTAL
CCEEEHEEEECHHHHHHHHHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA