Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

Click here to switch to the map view.

The map label for this gene is 212225094

Identifier: 212225094

GI number: 212225094

Start: 1823751

End: 1824521

Strand: Reverse

Name: 212225094

Synonym: TON_1942

Alternate gene names: NA

Gene position: 1824521-1823751 (Counterclockwise)

Preceding gene: 212225095

Following gene: 212225093

Centisome position: 98.75

GC content: 50.45

Gene sequence:

>771_bases
ATGTACACCGAAGAGGATCTTTTGAGAGAGATTAGGGAACTAATGGAGGACGACGAACTCTACCAGATGTACGAGAGGGC
CTTCAGGGAACACATCTACTACTTCGAGACGACCAACTACATAGTGCTGAATATCTACCAGTTCAACGACCACGGACCGA
TCCACGTTCTCCTCACAACGAGACGGGCCCTGGAGCTACTGAAAATTATCAAAAAGTTTGGAATTGAGACCACAGCGGAG
AAGCTCGGCAAGCCTTTCCGCTGGAGCAAGTTCATCGTTGCTTTTGGAGCGCTCTTCCACGACGTCGGCAACATGATACA
CAGAATAAACCACTACGAGTTCAGTGCCCTGCTTACGGAGCCAATAATAGACAAGCTCGCCAGGGAGTTTGAAACGGATG
ATTGGCTTCTCCTCAAAGCGCTCACGCTGAACGCCATCTACACGCACGATGAGCACGTGCCGTGCACAACCATTGAGGGG
AGCCTCGTCACCATAGCGGACGGCTGCGATATGGAAGCCGGAAGGAGCAGGCTCGTCCACAAGAAGGACCGCGTTGACAT
ACACGCCGTCTCAGCCCTGGCAATAGAGAAGGTCGAAATAAGGGAAGGAAACGAGGAGCAGCCGATACTCATTGAGATAT
GGATGAAGCACCTCGCAGGAGTCTTCCAAGTGGACGAAATTCTCACCAAGAAGGTCAAAAGCTCAGTACTGAGCGGAAAG
GTTAGGATAAGAATTTACGTCGGCGAAGAGATAATGGAGAAGGTTATTTAA

Upstream 100 bases:

>100_bases
TATTTTCTGTCCAAGCCCAACAACCATTCAAAGAGTTCTTTTCGCCTGGGCGTTCAAAACCCTTAAAACTTCCTTTTCTC
CATGCATTTGGGTGGGAAAT

Downstream 100 bases:

>100_bases
CCTTCCCTCCCAACCTTCTCCATGCTTCGAGATGCCTACATTGATCTCAAATATCTGCTCAACAGGGGCTACCGGAAAAG
CTATGCATTAGAATTCGTTG

Product: predicted metal-dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MYTEEDLLREIRELMEDDELYQMYERAFREHIYYFETTNYIVLNIYQFNDHGPIHVLLTTRRALELLKIIKKFGIETTAE
KLGKPFRWSKFIVAFGALFHDVGNMIHRINHYEFSALLTEPIIDKLAREFETDDWLLLKALTLNAIYTHDEHVPCTTIEG
SLVTIADGCDMEAGRSRLVHKKDRVDIHAVSALAIEKVEIREGNEEQPILIEIWMKHLAGVFQVDEILTKKVKSSVLSGK
VRIRIYVGEEIMEKVI

Sequences:

>Translated_256_residues
MYTEEDLLREIRELMEDDELYQMYERAFREHIYYFETTNYIVLNIYQFNDHGPIHVLLTTRRALELLKIIKKFGIETTAE
KLGKPFRWSKFIVAFGALFHDVGNMIHRINHYEFSALLTEPIIDKLAREFETDDWLLLKALTLNAIYTHDEHVPCTTIEG
SLVTIADGCDMEAGRSRLVHKKDRVDIHAVSALAIEKVEIREGNEEQPILIEIWMKHLAGVFQVDEILTKKVKSSVLSGK
VRIRIYVGEEIMEKVI
>Mature_256_residues
MYTEEDLLREIRELMEDDELYQMYERAFREHIYYFETTNYIVLNIYQFNDHGPIHVLLTTRRALELLKIIKKFGIETTAE
KLGKPFRWSKFIVAFGALFHDVGNMIHRINHYEFSALLTEPIIDKLAREFETDDWLLLKALTLNAIYTHDEHVPCTTIEG
SLVTIADGCDMEAGRSRLVHKKDRVDIHAVSALAIEKVEIREGNEEQPILIEIWMKHLAGVFQVDEILTKKVKSSVLSGK
VRIRIYVGEEIMEKVI

Specific function: Unknown

COG id: COG3294

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29895; Mature: 29895

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTEEDLLREIRELMEDDELYQMYERAFREHIYYFETTNYIVLNIYQFNDHGPIHVLLTT
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECCEEEEEEEEECCCCCEEEEEEC
RRALELLKIIKKFGIETTAEKLGKPFRWSKFIVAFGALFHDVGNMIHRINHYEFSALLTE
HHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
PIIDKLAREFETDDWLLLKALTLNAIYTHDEHVPCTTIEGSLVTIADGCDMEAGRSRLVH
HHHHHHHHHHCCCCCEEHHHHHHHHEEECCCCCCCEEECCCEEEEECCCCCHHHHHHHCC
KKDRVDIHAVSALAIEKVEIREGNEEQPILIEIWMKHLAGVFQVDEILTKKVKSSVLSGK
HHCCCHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
VRIRIYVGEEIMEKVI
EEEEEEECHHHHHHCC
>Mature Secondary Structure
MYTEEDLLREIRELMEDDELYQMYERAFREHIYYFETTNYIVLNIYQFNDHGPIHVLLTT
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECCEEEEEEEEECCCCCEEEEEEC
RRALELLKIIKKFGIETTAEKLGKPFRWSKFIVAFGALFHDVGNMIHRINHYEFSALLTE
HHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
PIIDKLAREFETDDWLLLKALTLNAIYTHDEHVPCTTIEGSLVTIADGCDMEAGRSRLVH
HHHHHHHHHHCCCCCEEHHHHHHHHEEECCCCCCCEEECCCEEEEECCCCCHHHHHHHCC
KKDRVDIHAVSALAIEKVEIREGNEEQPILIEIWMKHLAGVFQVDEILTKKVKSSVLSGK
HHCCCHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
VRIRIYVGEEIMEKVI
EEEEEEECHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]