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The map label for this gene is 212225095

Identifier: 212225095

GI number: 212225095

Start: 1824624

End: 1825034

Strand: Reverse

Name: 212225095

Synonym: TON_1943

Alternate gene names: NA

Gene position: 1825034-1824624 (Counterclockwise)

Preceding gene: 212225096

Following gene: 212225094

Centisome position: 98.78

GC content: 52.07

Gene sequence:

>411_bases
ATGCACCGCGAATGGCTCGTTATTCCCGATACCAACTTTCTCCTCGTCCCGGGACAGTTCGGCGTCGACATAATATCCGA
GCTGAACAGGGTTCTCGATGTGAAGTTCAGGATTGTAATTCCAAACGTTGTCCTTCAGGAACTGGACGTCATCGAAAGAA
AGTCCCGCGGGAAAGATCTGATGGCCATCAGAATGGCGAAGAAGCTGGCTGAAAGGTTCGAGACCGTGGATATAGGCTGG
TTTGGGGAGAGGCCAATAGACGACCAGATTTTTGACTTCGCCCTGAATAACGAGCGTGTTGTGGTCTGCACCAACGATAA
GGGGCTGAAAAAGAGGCTCCGCGCGAAGGGCATTCCGGTCGTGTACCTCCGCTCCAAGAAGATTCTGGAGCTTGAAGGAA
TGCTGGAGTGA

Upstream 100 bases:

>100_bases
GACAGGGTTGCCATCAGCAGGCAGGTCGGCAGCAGGTGGCGCCTCATAGGCTACGGCTTCATCAGGGAGTGACCCTCTCT
TTTCTCATTTGGTGGTCTCC

Downstream 100 bases:

>100_bases
GCTATTTTCTGTCCAAGCCCAACAACCATTCAAAGAGTTCTTTTCGCCTGGGCGTTCAAAACCCTTAAAACTTCCTTTTC
TCCATGCATTTGGGTGGGAA

Product: nucleic acid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MHREWLVIPDTNFLLVPGQFGVDIISELNRVLDVKFRIVIPNVVLQELDVIERKSRGKDLMAIRMAKKLAERFETVDIGW
FGERPIDDQIFDFALNNERVVVCTNDKGLKKRLRAKGIPVVYLRSKKILELEGMLE

Sequences:

>Translated_136_residues
MHREWLVIPDTNFLLVPGQFGVDIISELNRVLDVKFRIVIPNVVLQELDVIERKSRGKDLMAIRMAKKLAERFETVDIGW
FGERPIDDQIFDFALNNERVVVCTNDKGLKKRLRAKGIPVVYLRSKKILELEGMLE
>Mature_136_residues
MHREWLVIPDTNFLLVPGQFGVDIISELNRVLDVKFRIVIPNVVLQELDVIERKSRGKDLMAIRMAKKLAERFETVDIGW
FGERPIDDQIFDFALNNERVVVCTNDKGLKKRLRAKGIPVVYLRSKKILELEGMLE

Specific function: Unknown

COG id: COG1412

COG function: function code R; Uncharacterized proteins of PilT N-term./Vapc superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PIN domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006984
- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15791; Mature: 15791

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHREWLVIPDTNFLLVPGQFGVDIISELNRVLDVKFRIVIPNVVLQELDVIERKSRGKDL
CCCCEEEECCCCEEEECCCCCHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHCCCCHH
MAIRMAKKLAERFETVDIGWFGERPIDDQIFDFALNNERVVVCTNDKGLKKRLRAKGIPV
HHHHHHHHHHHHHCEECCCCCCCCCCCCHHEEEEECCCEEEEEECCHHHHHHHHHCCCCE
VYLRSKKILELEGMLE
EEECCCCEEEECCCCC
>Mature Secondary Structure
MHREWLVIPDTNFLLVPGQFGVDIISELNRVLDVKFRIVIPNVVLQELDVIERKSRGKDL
CCCCEEEECCCCEEEECCCCCHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHCCCCHH
MAIRMAKKLAERFETVDIGWFGERPIDDQIFDFALNNERVVVCTNDKGLKKRLRAKGIPV
HHHHHHHHHHHHHCEECCCCCCCCCCCCHHEEEEECCCEEEEEECCHHHHHHHHHCCCCE
VYLRSKKILELEGMLE
EEECCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]