| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212225093
Identifier: 212225093
GI number: 212225093
Start: 1823067
End: 1823729
Strand: Reverse
Name: 212225093
Synonym: TON_1941
Alternate gene names: NA
Gene position: 1823729-1823067 (Counterclockwise)
Preceding gene: 212225094
Following gene: 212225092
Centisome position: 98.71
GC content: 49.92
Gene sequence:
>663_bases ATGCTTCGAGATGCCTACATTGATCTCAAATATCTGCTCAACAGGGGCTACCGGAAAAGCTATGCATTAGAATTCGTTGC CAACCACTACAGGCTTACGAAAAAAGAGCGGCATCTTCTGGCCAGATGCGTCTTTTCTGATGGATGGATCAGGGAAGTTG AGGGAAAGCTCCTAAAACCCGAAGAACTTGTCGGGAAGGTTCTGGCGGTAGACGGTTTCAACGTCCTCATAACCCTCGAA TCTCTCCTCGATGGGAAAGCAATACTCTGCGAGGACGGCTTGATAAGGGACCTGAAGTACCAGGGGAGGTATAGAATCAA CGAGAGGACCGGTGATTTGCTTACTAAAATCGCGATGGCCCTGAAGGAACTGGGGATTAAGAAGACGGTCTTCTTTTACG GGAAGAACGTGCCGGGAAGCGGAGAGGTCAAGAGGCTGACCGAGGAGAAGCTGAAGGAATTTGATATTCCTGGGGAAGTA AAACTGGTTAAAAGCCCAGATTTTGAGCTCAAGGCCTTTGAGGTGGTTGCCACCGCGGATGTGGGGATAATCGTCAGAGT TCCCCACGTCTTTGACCTCGCTGGATACGTCGGCGAGAAGCTCGGAAAGGGAGCGAGGCCATTCGTTGAGTTTATGGGGA AAATGTGTTCAGAGGAGGTTTAA
Upstream 100 bases:
>100_bases GGTCAAAAGCTCAGTACTGAGCGGAAAGGTTAGGATAAGAATTTACGTCGGCGAAGAGATAATGGAGAAGGTTATTTAAC CTTCCCTCCCAACCTTCTCC
Downstream 100 bases:
>100_bases CACTTAGATTTATTTTCTTCGAACAGTTACAGGCTCACTTGAAACTTTTGAAAACCTTTACTAACCACTTTACGCCGGAG AGGGACGCTGTGGACATCTG
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MLRDAYIDLKYLLNRGYRKSYALEFVANHYRLTKKERHLLARCVFSDGWIREVEGKLLKPEELVGKVLAVDGFNVLITLE SLLDGKAILCEDGLIRDLKYQGRYRINERTGDLLTKIAMALKELGIKKTVFFYGKNVPGSGEVKRLTEEKLKEFDIPGEV KLVKSPDFELKAFEVVATADVGIIVRVPHVFDLAGYVGEKLGKGARPFVEFMGKMCSEEV
Sequences:
>Translated_220_residues MLRDAYIDLKYLLNRGYRKSYALEFVANHYRLTKKERHLLARCVFSDGWIREVEGKLLKPEELVGKVLAVDGFNVLITLE SLLDGKAILCEDGLIRDLKYQGRYRINERTGDLLTKIAMALKELGIKKTVFFYGKNVPGSGEVKRLTEEKLKEFDIPGEV KLVKSPDFELKAFEVVATADVGIIVRVPHVFDLAGYVGEKLGKGARPFVEFMGKMCSEEV >Mature_220_residues MLRDAYIDLKYLLNRGYRKSYALEFVANHYRLTKKERHLLARCVFSDGWIREVEGKLLKPEELVGKVLAVDGFNVLITLE SLLDGKAILCEDGLIRDLKYQGRYRINERTGDLLTKIAMALKELGIKKTVFFYGKNVPGSGEVKRLTEEKLKEFDIPGEV KLVKSPDFELKAFEVVATADVGIIVRVPHVFDLAGYVGEKLGKGARPFVEFMGKMCSEEV
Specific function: Unknown
COG id: COG2454
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007368 - ProDom: PD019177 [H]
Pfam domain/function: PF04256 DUF434 [H]
EC number: NA
Molecular weight: Translated: 24950; Mature: 24950
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRDAYIDLKYLLNRGYRKSYALEFVANHYRLTKKERHLLARCVFSDGWIREVEGKLLKP CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCH EELVGKVLAVDGFNVLITLESLLDGKAILCEDGLIRDLKYQGRYRINERTGDLLTKIAMA HHHHHHHHHCCCCEEEEEEHHHHCCCEEEECCCCHHHHCCCCCEEECCHHHHHHHHHHHH LKELGIKKTVFFYGKNVPGSGEVKRLTEEKLKEFDIPGEVKLVKSPDFELKAFEVVATAD HHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEECC VGIIVRVPHVFDLAGYVGEKLGKGARPFVEFMGKMCSEEV CEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MLRDAYIDLKYLLNRGYRKSYALEFVANHYRLTKKERHLLARCVFSDGWIREVEGKLLKP CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCH EELVGKVLAVDGFNVLITLESLLDGKAILCEDGLIRDLKYQGRYRINERTGDLLTKIAMA HHHHHHHHHCCCCEEEEEEHHHHCCCEEEECCCCHHHHCCCCCEEECCHHHHHHHHHHHH LKELGIKKTVFFYGKNVPGSGEVKRLTEEKLKEFDIPGEVKLVKSPDFELKAFEVVATAD HHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEECC VGIIVRVPHVFDLAGYVGEKLGKGARPFVEFMGKMCSEEV CEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]