Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212225093

Identifier: 212225093

GI number: 212225093

Start: 1823067

End: 1823729

Strand: Reverse

Name: 212225093

Synonym: TON_1941

Alternate gene names: NA

Gene position: 1823729-1823067 (Counterclockwise)

Preceding gene: 212225094

Following gene: 212225092

Centisome position: 98.71

GC content: 49.92

Gene sequence:

>663_bases
ATGCTTCGAGATGCCTACATTGATCTCAAATATCTGCTCAACAGGGGCTACCGGAAAAGCTATGCATTAGAATTCGTTGC
CAACCACTACAGGCTTACGAAAAAAGAGCGGCATCTTCTGGCCAGATGCGTCTTTTCTGATGGATGGATCAGGGAAGTTG
AGGGAAAGCTCCTAAAACCCGAAGAACTTGTCGGGAAGGTTCTGGCGGTAGACGGTTTCAACGTCCTCATAACCCTCGAA
TCTCTCCTCGATGGGAAAGCAATACTCTGCGAGGACGGCTTGATAAGGGACCTGAAGTACCAGGGGAGGTATAGAATCAA
CGAGAGGACCGGTGATTTGCTTACTAAAATCGCGATGGCCCTGAAGGAACTGGGGATTAAGAAGACGGTCTTCTTTTACG
GGAAGAACGTGCCGGGAAGCGGAGAGGTCAAGAGGCTGACCGAGGAGAAGCTGAAGGAATTTGATATTCCTGGGGAAGTA
AAACTGGTTAAAAGCCCAGATTTTGAGCTCAAGGCCTTTGAGGTGGTTGCCACCGCGGATGTGGGGATAATCGTCAGAGT
TCCCCACGTCTTTGACCTCGCTGGATACGTCGGCGAGAAGCTCGGAAAGGGAGCGAGGCCATTCGTTGAGTTTATGGGGA
AAATGTGTTCAGAGGAGGTTTAA

Upstream 100 bases:

>100_bases
GGTCAAAAGCTCAGTACTGAGCGGAAAGGTTAGGATAAGAATTTACGTCGGCGAAGAGATAATGGAGAAGGTTATTTAAC
CTTCCCTCCCAACCTTCTCC

Downstream 100 bases:

>100_bases
CACTTAGATTTATTTTCTTCGAACAGTTACAGGCTCACTTGAAACTTTTGAAAACCTTTACTAACCACTTTACGCCGGAG
AGGGACGCTGTGGACATCTG

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MLRDAYIDLKYLLNRGYRKSYALEFVANHYRLTKKERHLLARCVFSDGWIREVEGKLLKPEELVGKVLAVDGFNVLITLE
SLLDGKAILCEDGLIRDLKYQGRYRINERTGDLLTKIAMALKELGIKKTVFFYGKNVPGSGEVKRLTEEKLKEFDIPGEV
KLVKSPDFELKAFEVVATADVGIIVRVPHVFDLAGYVGEKLGKGARPFVEFMGKMCSEEV

Sequences:

>Translated_220_residues
MLRDAYIDLKYLLNRGYRKSYALEFVANHYRLTKKERHLLARCVFSDGWIREVEGKLLKPEELVGKVLAVDGFNVLITLE
SLLDGKAILCEDGLIRDLKYQGRYRINERTGDLLTKIAMALKELGIKKTVFFYGKNVPGSGEVKRLTEEKLKEFDIPGEV
KLVKSPDFELKAFEVVATADVGIIVRVPHVFDLAGYVGEKLGKGARPFVEFMGKMCSEEV
>Mature_220_residues
MLRDAYIDLKYLLNRGYRKSYALEFVANHYRLTKKERHLLARCVFSDGWIREVEGKLLKPEELVGKVLAVDGFNVLITLE
SLLDGKAILCEDGLIRDLKYQGRYRINERTGDLLTKIAMALKELGIKKTVFFYGKNVPGSGEVKRLTEEKLKEFDIPGEV
KLVKSPDFELKAFEVVATADVGIIVRVPHVFDLAGYVGEKLGKGARPFVEFMGKMCSEEV

Specific function: Unknown

COG id: COG2454

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007368
- ProDom:   PD019177 [H]

Pfam domain/function: PF04256 DUF434 [H]

EC number: NA

Molecular weight: Translated: 24950; Mature: 24950

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRDAYIDLKYLLNRGYRKSYALEFVANHYRLTKKERHLLARCVFSDGWIREVEGKLLKP
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCH
EELVGKVLAVDGFNVLITLESLLDGKAILCEDGLIRDLKYQGRYRINERTGDLLTKIAMA
HHHHHHHHHCCCCEEEEEEHHHHCCCEEEECCCCHHHHCCCCCEEECCHHHHHHHHHHHH
LKELGIKKTVFFYGKNVPGSGEVKRLTEEKLKEFDIPGEVKLVKSPDFELKAFEVVATAD
HHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEECC
VGIIVRVPHVFDLAGYVGEKLGKGARPFVEFMGKMCSEEV
CEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRDAYIDLKYLLNRGYRKSYALEFVANHYRLTKKERHLLARCVFSDGWIREVEGKLLKP
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCH
EELVGKVLAVDGFNVLITLESLLDGKAILCEDGLIRDLKYQGRYRINERTGDLLTKIAMA
HHHHHHHHHCCCCEEEEEEHHHHCCCEEEECCCCHHHHCCCCCEEECCHHHHHHHHHHHH
LKELGIKKTVFFYGKNVPGSGEVKRLTEEKLKEFDIPGEVKLVKSPDFELKAFEVVATAD
HHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEECC
VGIIVRVPHVFDLAGYVGEKLGKGARPFVEFMGKMCSEEV
CEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]