| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212225050
Identifier: 212225050
GI number: 212225050
Start: 1788037
End: 1789518
Strand: Reverse
Name: 212225050
Synonym: TON_1898
Alternate gene names: NA
Gene position: 1789518-1788037 (Counterclockwise)
Preceding gene: 212225051
Following gene: 212225049
Centisome position: 96.86
GC content: 48.65
Gene sequence:
>1482_bases ATGAGGCGAGGTCAGCTACTTTCCTTTGACGCGATGCTCTCATTGGTCATAGTTATACTCATGCTGGGAATGATAACCAG CACATCCAGTGCACTAAAAGATGATATAACCATCATGCTGGGCTGGTACGAGAGGGCTAATATAGGAGACAACATGCTCG ATATCATCGTAAAAAATCCCGGAGTTCCATCTGACTGGGAGTCGAACCCTTCAAATCTAGCCTATCTCGGGCTAGAGAAC ACAAAATATCCCAACACAATAGACTACAAAAAGATAGAGGCCCTAAATAAGGCCTATACTAATGGTGAGGCCTCTTTGAA GAGTGCACTAGTCAACTTAAGCATGGGGAAAGACTTTACCCTCGGATTTTACCTCACTAGAATTGAAATTGAAGGAGACG TGACAGTAGTGCCTCCCAACGTGGATGGTTCCGTAGATATCCCTTGGGGAGGGCGCCTATCCATCACACCCACGCATGGA TACGCCTATGGAAACCCAATAGTGGACATCGTGTGGGCCTATCCACTCAGAACAGACCTTCGCGGTACAGGAGGCATAGC AAATATAACCAACCTGACAGCGGGGGAAAGCTTTGTATTCAAACTCGCCGAGGATGCAGACGTGAGAGTTGACATCCCCG CTCCCGGTGGCCCCCAGAACTATAACATACCAGCCGGCGCTACGGTCTATATAGATGTGGACAGTGGGTGGCTCCTCATA GGATGGAACCGTCTCAACGACGGAACTTACGAACTGTGGATACCCTATCATAGGGAAGGAGAACAAGTCACGACAACATG GACAGGGACGATATGGTGGGGCCAGCAGGGAGGCGTATCGTCTACTAACCTTACAATTAGATACGTCTACGCAACGAAGG TCGTCAACGCCGACTACAACATGACAATGATAAACGGCACCTTTGTTGACAACCCCTCAATCATAAAAGCCTCTATGGAC CGCTCTCCGTGGATAACCTACACCGAGAGAAGGGTTCCGATGACCAAGATGCTGTACAACGAAACTTATACTGTGACTTC GGACGCGCTTCCTGAGGAGCTCTACATTGGAACGATATACACGACCATCCCAGACTACATGGCTCTCAAGATCGCGTTCA ACAACACGGGCTACATCGTCATGGTTGCCTGGATGAGGGGTACCAATATCTCTGGCTACTCCGTTATGGCTGCCTACAGG ACCGCCGCCGATTCCACAATGAAGATAATCGTCAATCAGACAATCAACGGAAAAACTTACATAAAATCGTACATCTCTGA GAGCCCCTACTACGCGATAATACCCTGGAAGGAGTTTCTGACCCAGATAAACCAAGGTGAAAGCCTGGATATATACGTCT GGGTCTACGAGATGAAGAACATCGATGAGGCCGTAATAACTGACCTCAATGGAATAGATACCATAATGAAGCCCCAGGCG AGCCTCGCCGTGTTAAAGCTGTGGGTGTGGGATGACTCATGA
Upstream 100 bases:
>100_bases TAGTCAATGACCTTGCCTCAAACACGAACGTTCGGCTGAGCGGGGGCAAGCTGTATTTTGGTGGAAAAGAAGTTGAGATA AACGTGGATGTGGTGAGAAA
Downstream 100 bases:
>100_bases AGAGACGGGGCTTTGTATTCACACTCGACGCCATACTTGCACTCCTGCTCGTAACAATATTTGTGGTTAGCATAAGCCAG ATTAACCCGAACGCCCAAGT
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MRRGQLLSFDAMLSLVIVILMLGMITSTSSALKDDITIMLGWYERANIGDNMLDIIVKNPGVPSDWESNPSNLAYLGLEN TKYPNTIDYKKIEALNKAYTNGEASLKSALVNLSMGKDFTLGFYLTRIEIEGDVTVVPPNVDGSVDIPWGGRLSITPTHG YAYGNPIVDIVWAYPLRTDLRGTGGIANITNLTAGESFVFKLAEDADVRVDIPAPGGPQNYNIPAGATVYIDVDSGWLLI GWNRLNDGTYELWIPYHREGEQVTTTWTGTIWWGQQGGVSSTNLTIRYVYATKVVNADYNMTMINGTFVDNPSIIKASMD RSPWITYTERRVPMTKMLYNETYTVTSDALPEELYIGTIYTTIPDYMALKIAFNNTGYIVMVAWMRGTNISGYSVMAAYR TAADSTMKIIVNQTINGKTYIKSYISESPYYAIIPWKEFLTQINQGESLDIYVWVYEMKNIDEAVITDLNGIDTIMKPQA SLAVLKLWVWDDS
Sequences:
>Translated_493_residues MRRGQLLSFDAMLSLVIVILMLGMITSTSSALKDDITIMLGWYERANIGDNMLDIIVKNPGVPSDWESNPSNLAYLGLEN TKYPNTIDYKKIEALNKAYTNGEASLKSALVNLSMGKDFTLGFYLTRIEIEGDVTVVPPNVDGSVDIPWGGRLSITPTHG YAYGNPIVDIVWAYPLRTDLRGTGGIANITNLTAGESFVFKLAEDADVRVDIPAPGGPQNYNIPAGATVYIDVDSGWLLI GWNRLNDGTYELWIPYHREGEQVTTTWTGTIWWGQQGGVSSTNLTIRYVYATKVVNADYNMTMINGTFVDNPSIIKASMD RSPWITYTERRVPMTKMLYNETYTVTSDALPEELYIGTIYTTIPDYMALKIAFNNTGYIVMVAWMRGTNISGYSVMAAYR TAADSTMKIIVNQTINGKTYIKSYISESPYYAIIPWKEFLTQINQGESLDIYVWVYEMKNIDEAVITDLNGIDTIMKPQA SLAVLKLWVWDDS >Mature_493_residues MRRGQLLSFDAMLSLVIVILMLGMITSTSSALKDDITIMLGWYERANIGDNMLDIIVKNPGVPSDWESNPSNLAYLGLEN TKYPNTIDYKKIEALNKAYTNGEASLKSALVNLSMGKDFTLGFYLTRIEIEGDVTVVPPNVDGSVDIPWGGRLSITPTHG YAYGNPIVDIVWAYPLRTDLRGTGGIANITNLTAGESFVFKLAEDADVRVDIPAPGGPQNYNIPAGATVYIDVDSGWLLI GWNRLNDGTYELWIPYHREGEQVTTTWTGTIWWGQQGGVSSTNLTIRYVYATKVVNADYNMTMINGTFVDNPSIIKASMD RSPWITYTERRVPMTKMLYNETYTVTSDALPEELYIGTIYTTIPDYMALKIAFNNTGYIVMVAWMRGTNISGYSVMAAYR TAADSTMKIIVNQTINGKTYIKSYISESPYYAIIPWKEFLTQINQGESLDIYVWVYEMKNIDEAVITDLNGIDTIMKPQA SLAVLKLWVWDDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55087; Mature: 55087
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRGQLLSFDAMLSLVIVILMLGMITSTSSALKDDITIMLGWYERANIGDNMLDIIVKNP CCCCCEECHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEEECCCCCCCEEEEEEECC GVPSDWESNPSNLAYLGLENTKYPNTIDYKKIEALNKAYTNGEASLKSALVNLSMGKDFT CCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHEEEEECCCCEE LGFYLTRIEIEGDVTVVPPNVDGSVDIPWGGRLSITPTHGYAYGNPIVDIVWAYPLRTDL EEEEEEEEEEECCEEEECCCCCCCEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCC RGTGGIANITNLTAGESFVFKLAEDADVRVDIPAPGGPQNYNIPAGATVYIDVDSGWLLI CCCCCCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEE GWNRLNDGTYELWIPYHREGEQVTTTWTGTIWWGQQGGVSSTNLTIRYVYATKVVNADYN EEEECCCCEEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCE MTMINGTFVDNPSIIKASMDRSPWITYTERRVPMTKMLYNETYTVTSDALPEELYIGTIY EEEEEEEEECCCCEEEEECCCCCCEEEECCCCCHHHHHCCCEEEEECCCCCCEEEEEEEE TTIPDYMALKIAFNNTGYIVMVAWMRGTNISGYSVMAAYRTAADSTMKIIVNQTINGKTY CCCCCEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEHHCCCCEEEEEEEECCCCHHH IKSYISESPYYAIIPWKEFLTQINQGESLDIYVWVYEMKNIDEAVITDLNGIDTIMKPQA HHHHHCCCCCEEEEEHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHCCCCCCCHHHCCCC SLAVLKLWVWDDS CEEEEEEEEECCC >Mature Secondary Structure MRRGQLLSFDAMLSLVIVILMLGMITSTSSALKDDITIMLGWYERANIGDNMLDIIVKNP CCCCCEECHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEEECCCCCCCEEEEEEECC GVPSDWESNPSNLAYLGLENTKYPNTIDYKKIEALNKAYTNGEASLKSALVNLSMGKDFT CCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHEEEEECCCCEE LGFYLTRIEIEGDVTVVPPNVDGSVDIPWGGRLSITPTHGYAYGNPIVDIVWAYPLRTDL EEEEEEEEEEECCEEEECCCCCCCEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCC RGTGGIANITNLTAGESFVFKLAEDADVRVDIPAPGGPQNYNIPAGATVYIDVDSGWLLI CCCCCCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEE GWNRLNDGTYELWIPYHREGEQVTTTWTGTIWWGQQGGVSSTNLTIRYVYATKVVNADYN EEEECCCCEEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCE MTMINGTFVDNPSIIKASMDRSPWITYTERRVPMTKMLYNETYTVTSDALPEELYIGTIY EEEEEEEEECCCCEEEEECCCCCCEEEECCCCCHHHHHCCCEEEEECCCCCCEEEEEEEE TTIPDYMALKIAFNNTGYIVMVAWMRGTNISGYSVMAAYRTAADSTMKIIVNQTINGKTY CCCCCEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEHHCCCCEEEEEEEECCCCHHH IKSYISESPYYAIIPWKEFLTQINQGESLDIYVWVYEMKNIDEAVITDLNGIDTIMKPQA HHHHHCCCCCEEEEEHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHCCCCCCCHHHCCCC SLAVLKLWVWDDS CEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA