| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212225049
Identifier: 212225049
GI number: 212225049
Start: 1785872
End: 1788040
Strand: Reverse
Name: 212225049
Synonym: TON_1897
Alternate gene names: NA
Gene position: 1788040-1785872 (Counterclockwise)
Preceding gene: 212225050
Following gene: 212225048
Centisome position: 96.78
GC content: 46.43
Gene sequence:
>2169_bases ATGAAGAGACGGGGCTTTGTATTCACACTCGACGCCATACTTGCACTCCTGCTCGTAACAATATTTGTGGTTAGCATAAG CCAGATTAACCCGAACGCCCAAGTTTACTCAACATACATGCGTTCTCAGTCCAAATATGTGGCAGAAGATACCCTAACCA TGTTCAGAACCCTTCCCCTTAGGGAGCTCGTTCCTCCAGAGAAGCTCGAAGAGTGGATAAGCGATGGAACTCTCAACACA ACGCTTGTAACTCCAGATATGTCCCCAATCGATATCGTGGCAACGTACTGGGCCACAGCACCGGTTTTTCCAGATGCAAA CCTTAAGCACAAAGCGGAGGTAATAATGGGTTACGTCCTCAACAACACCTTAACGGACTACAACTATGAACTCATGATAA ACAACTACACAAGCCCATATCTAAGAAAAACTGGAGCCAACTATTCAACGGCCTCGGACGTGACCCCCGCCACACTCCTA CTCAGTGGTTATGCCTACAACCAGACGCCGAGGGGATACATGGCGAGGGCGTTTCTCAACAATCTAGGAAGCAAGGAAAA CACCTATACAGCCAGGGGAGGATACATATATGCAAGAACGGATAACCAAGATGACGCCGTCATAATAAAATACATAATTC CCGCGGATGCTATTCCAAAGGATGCCGAAATTCAGGAAATAAATTGGTTCCTTGAGCCGGCACGGGTCGGTTCTAACTAT GAGGTCTATCTTAATGGCCAACTCATATGGTCAGGGTACGTTGACAACAACGAAAAGCTCGTAGACACGAACCCATCCGG AGGACTGGAGTTAATAGAGAACTTCAAACCTGGAGAGACCAACGTATTCGAAGTGAGGGTCTACAAGAGCGGGTACGATG GTGGTGAAAAAGGTGCCCAATACATTAAGATAAAGTATACCACATCAATTCCCTCCACGCTTAAATTTAACGACAAGTTC TATTTCGAGGACGTTACGGCCAAACACGGAATAACAGCATGGAAATATCTCTTCATCCCTGGAAAACTTAATGCCCTGAG TATTCAGATCGCCGTTGGAAACGTTTCCGCTCAGACTCCAGTCTCATTATCGTTCATGTTCAACGAAGAAATACCCATAC CTCTAAGCGCACCGTGCCAGTATAACGCCACCACGATGACGAAGGTGTGCTACTGGGACAACACCACCATAGCAACTGCC CTTGAAAACGCTGGGTACAACTATACCCACATCTCAAGCAGATATACCACGATAATAGTTAGGGCAGGCTATGAGAATAC TGAGTACGTTCCAAACATCCACCTCATAGGCAATGAATCCTTTGTTTATGCGGACTACACACCCGGCGTGCTGCTTACTT CTTACACCATCGACATAACCGAACCGATAAATCAGTACACTGCATCTCTCTGTGATGCATCGGATGTTGACGATCCATCT AGCTGGTGCAGAGATGTTACTTGGACATTTGAAATTCCTTATGGAACCACTCCTCTTTGGGTAAAGTTCCAGTTCCCCTG GTATTATCTAGATACTTCCTCAGAAAAGACTCCCACCCAAGAAATTGAAATAACTAATGATTACATCGGAAGCCAATATA TATACCAGCATCCACCCAATCCGTTCATATATGCCCTTGCAAGAATAGGGTATACTAGAAACACCTTTGACAGTCAATTT AGACTCCTAAACAACGCTCTTATTCCCGGAGAAAATAAAGTCCACATAAGCCTAGGAAAGGACACAGACGAAAATGGAGA TGAATACGGATACTGGATACAACCCCAAAATGGAGACGGAGAACTAACCTACGTTATTCAGGGTTTTGCTGGATACGGTA ACGTCTTCCCAGAACTCTTGAGGAGCGGCTGTTCCGGATACAACATCACCTACTACTGGACCGGAGACAGCTCTCCGCAT TACGTTACCGCAGGAGATGCCCCATACTGTGATATCACCGCCCAGGATCTCCTCGATGGAATGGAGCGATACGCCGTTGA CGACGCGATAATAAGGCTCTTCCGCAACCTCGGCGGCGATGGAACCCAGACTAACCCAATACTGATAAAGCTGCCCCCAA CCGTCAACGTAGTCTTTGTTTCCATGGGCAACATTCCGGGTCTCTTTAAACCGATAACAATAACCCTGAGGATCTGGAGG GAAGACTGA
Upstream 100 bases:
>100_bases ACATCGATGAGGCCGTAATAACTGACCTCAATGGAATAGATACCATAATGAAGCCCCAGGCGAGCCTCGCCGTGTTAAAG CTGTGGGTGTGGGATGACTC
Downstream 100 bases:
>100_bases TGAGAAAGCGGCGCGCATTCGTTCTTAACTCCACGGTTATCCTTCTTCTAATCCCCCTTATGCTTCTTCTCGCGACGTAT GAGGACGTATCATCACAGAT
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 722; Mature: 722
Protein sequence:
>722_residues MKRRGFVFTLDAILALLLVTIFVVSISQINPNAQVYSTYMRSQSKYVAEDTLTMFRTLPLRELVPPEKLEEWISDGTLNT TLVTPDMSPIDIVATYWATAPVFPDANLKHKAEVIMGYVLNNTLTDYNYELMINNYTSPYLRKTGANYSTASDVTPATLL LSGYAYNQTPRGYMARAFLNNLGSKENTYTARGGYIYARTDNQDDAVIIKYIIPADAIPKDAEIQEINWFLEPARVGSNY EVYLNGQLIWSGYVDNNEKLVDTNPSGGLELIENFKPGETNVFEVRVYKSGYDGGEKGAQYIKIKYTTSIPSTLKFNDKF YFEDVTAKHGITAWKYLFIPGKLNALSIQIAVGNVSAQTPVSLSFMFNEEIPIPLSAPCQYNATTMTKVCYWDNTTIATA LENAGYNYTHISSRYTTIIVRAGYENTEYVPNIHLIGNESFVYADYTPGVLLTSYTIDITEPINQYTASLCDASDVDDPS SWCRDVTWTFEIPYGTTPLWVKFQFPWYYLDTSSEKTPTQEIEITNDYIGSQYIYQHPPNPFIYALARIGYTRNTFDSQF RLLNNALIPGENKVHISLGKDTDENGDEYGYWIQPQNGDGELTYVIQGFAGYGNVFPELLRSGCSGYNITYYWTGDSSPH YVTAGDAPYCDITAQDLLDGMERYAVDDAIIRLFRNLGGDGTQTNPILIKLPPTVNVVFVSMGNIPGLFKPITITLRIWR ED
Sequences:
>Translated_722_residues MKRRGFVFTLDAILALLLVTIFVVSISQINPNAQVYSTYMRSQSKYVAEDTLTMFRTLPLRELVPPEKLEEWISDGTLNT TLVTPDMSPIDIVATYWATAPVFPDANLKHKAEVIMGYVLNNTLTDYNYELMINNYTSPYLRKTGANYSTASDVTPATLL LSGYAYNQTPRGYMARAFLNNLGSKENTYTARGGYIYARTDNQDDAVIIKYIIPADAIPKDAEIQEINWFLEPARVGSNY EVYLNGQLIWSGYVDNNEKLVDTNPSGGLELIENFKPGETNVFEVRVYKSGYDGGEKGAQYIKIKYTTSIPSTLKFNDKF YFEDVTAKHGITAWKYLFIPGKLNALSIQIAVGNVSAQTPVSLSFMFNEEIPIPLSAPCQYNATTMTKVCYWDNTTIATA LENAGYNYTHISSRYTTIIVRAGYENTEYVPNIHLIGNESFVYADYTPGVLLTSYTIDITEPINQYTASLCDASDVDDPS SWCRDVTWTFEIPYGTTPLWVKFQFPWYYLDTSSEKTPTQEIEITNDYIGSQYIYQHPPNPFIYALARIGYTRNTFDSQF RLLNNALIPGENKVHISLGKDTDENGDEYGYWIQPQNGDGELTYVIQGFAGYGNVFPELLRSGCSGYNITYYWTGDSSPH YVTAGDAPYCDITAQDLLDGMERYAVDDAIIRLFRNLGGDGTQTNPILIKLPPTVNVVFVSMGNIPGLFKPITITLRIWR ED >Mature_722_residues MKRRGFVFTLDAILALLLVTIFVVSISQINPNAQVYSTYMRSQSKYVAEDTLTMFRTLPLRELVPPEKLEEWISDGTLNT TLVTPDMSPIDIVATYWATAPVFPDANLKHKAEVIMGYVLNNTLTDYNYELMINNYTSPYLRKTGANYSTASDVTPATLL LSGYAYNQTPRGYMARAFLNNLGSKENTYTARGGYIYARTDNQDDAVIIKYIIPADAIPKDAEIQEINWFLEPARVGSNY EVYLNGQLIWSGYVDNNEKLVDTNPSGGLELIENFKPGETNVFEVRVYKSGYDGGEKGAQYIKIKYTTSIPSTLKFNDKF YFEDVTAKHGITAWKYLFIPGKLNALSIQIAVGNVSAQTPVSLSFMFNEEIPIPLSAPCQYNATTMTKVCYWDNTTIATA LENAGYNYTHISSRYTTIIVRAGYENTEYVPNIHLIGNESFVYADYTPGVLLTSYTIDITEPINQYTASLCDASDVDDPS SWCRDVTWTFEIPYGTTPLWVKFQFPWYYLDTSSEKTPTQEIEITNDYIGSQYIYQHPPNPFIYALARIGYTRNTFDSQF RLLNNALIPGENKVHISLGKDTDENGDEYGYWIQPQNGDGELTYVIQGFAGYGNVFPELLRSGCSGYNITYYWTGDSSPH YVTAGDAPYCDITAQDLLDGMERYAVDDAIIRLFRNLGGDGTQTNPILIKLPPTVNVVFVSMGNIPGLFKPITITLRIWR ED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81345; Mature: 81345
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRGFVFTLDAILALLLVTIFVVSISQINPNAQVYSTYMRSQSKYVAEDTLTMFRTLPL CCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCH RELVPPEKLEEWISDGTLNTTLVTPDMSPIDIVATYWATAPVFPDANLKHKAEVIMGYVL HHCCCHHHHHHHHCCCCCEEEEECCCCCCHHEEEEHHCCCCCCCCCCCCCCHHEEEEEEC NNTLTDYNYELMINNYTSPYLRKTGANYSTASDVTPATLLLSGYAYNQTPRGYMARAFLN CCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH NLGSKENTYTARGGYIYARTDNQDDAVIIKYIIPADAIPKDAEIQEINWFLEPARVGSNY HCCCCCCCEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEHHHCCCCE EVYLNGQLIWSGYVDNNEKLVDTNPSGGLELIENFKPGETNVFEVRVYKSGYDGGEKGAQ EEEECCEEEEEEEECCCCEEEECCCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCE YIKIKYTTSIPSTLKFNDKFYFEDVTAKHGITAWKYLFIPGKLNALSIQIAVGNVSAQTP EEEEEEEECCCCEEEECCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCC VSLSFMFNEEIPIPLSAPCQYNATTMTKVCYWDNTTIATALENAGYNYTHISSRYTTIIV EEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEHHHHCCCCEEEECCCEEEEEE RAGYENTEYVPNIHLIGNESFVYADYTPGVLLTSYTIDITEPINQYTASLCDASDVDDPS EECCCCCCCCCEEEEECCCEEEEEECCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCHH SWCRDVTWTFEIPYGTTPLWVKFQFPWYYLDTSSEKTPTQEIEITNDYIGSQYIYQHPPN HHHCCEEEEEECCCCCCCEEEEEECCEEEEECCCCCCCCEEEEEECCCCCCCEEEECCCC PFIYALARIGYTRNTFDSQFRLLNNALIPGENKVHISLGKDTDENGDEYGYWIQPQNGDG HHHHHEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCC ELTYVIQGFAGYGNVFPELLRSGCSGYNITYYWTGDSSPHYVTAGDAPYCDITAQDLLDG CEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCCCCEECCCHHHHHHH MERYAVDDAIIRLFRNLGGDGTQTNPILIKLPPTVNVVFVSMGNIPGLFKPITITLRIWR HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCEEEEEEEEEEE ED CC >Mature Secondary Structure MKRRGFVFTLDAILALLLVTIFVVSISQINPNAQVYSTYMRSQSKYVAEDTLTMFRTLPL CCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCH RELVPPEKLEEWISDGTLNTTLVTPDMSPIDIVATYWATAPVFPDANLKHKAEVIMGYVL HHCCCHHHHHHHHCCCCCEEEEECCCCCCHHEEEEHHCCCCCCCCCCCCCCHHEEEEEEC NNTLTDYNYELMINNYTSPYLRKTGANYSTASDVTPATLLLSGYAYNQTPRGYMARAFLN CCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH NLGSKENTYTARGGYIYARTDNQDDAVIIKYIIPADAIPKDAEIQEINWFLEPARVGSNY HCCCCCCCEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEHHHCCCCE EVYLNGQLIWSGYVDNNEKLVDTNPSGGLELIENFKPGETNVFEVRVYKSGYDGGEKGAQ EEEECCEEEEEEEECCCCEEEECCCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCE YIKIKYTTSIPSTLKFNDKFYFEDVTAKHGITAWKYLFIPGKLNALSIQIAVGNVSAQTP EEEEEEEECCCCEEEECCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCC VSLSFMFNEEIPIPLSAPCQYNATTMTKVCYWDNTTIATALENAGYNYTHISSRYTTIIV EEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEHHHHCCCCEEEECCCEEEEEE RAGYENTEYVPNIHLIGNESFVYADYTPGVLLTSYTIDITEPINQYTASLCDASDVDDPS EECCCCCCCCCEEEEECCCEEEEEECCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCHH SWCRDVTWTFEIPYGTTPLWVKFQFPWYYLDTSSEKTPTQEIEITNDYIGSQYIYQHPPN HHHCCEEEEEECCCCCCCEEEEEECCEEEEECCCCCCCCEEEEEECCCCCCCEEEECCCC PFIYALARIGYTRNTFDSQFRLLNNALIPGENKVHISLGKDTDENGDEYGYWIQPQNGDG HHHHHEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCC ELTYVIQGFAGYGNVFPELLRSGCSGYNITYYWTGDSSPHYVTAGDAPYCDITAQDLLDG CEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCCCCEECCCHHHHHHH MERYAVDDAIIRLFRNLGGDGTQTNPILIKLPPTVNVVFVSMGNIPGLFKPITITLRIWR HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCEEEEEEEEEEE ED CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA