| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212225051
Identifier: 212225051
GI number: 212225051
Start: 1789515
End: 1789988
Strand: Reverse
Name: 212225051
Synonym: TON_1899
Alternate gene names: NA
Gene position: 1789988-1789515 (Counterclockwise)
Preceding gene: 212225052
Following gene: 212225050
Centisome position: 96.88
GC content: 46.84
Gene sequence:
>474_bases ATGTCGATATCTCGTCGTAGGGCTCAAACCGCGATTGAGGCTCTCTTCATAATTGCCATAATCCTGGCCGGTGTTCTAAT AATAGTACCCCCCTACCTGAATGAGAACAGAGATATCTCACTAGTAGTCTATGCAAGGAATTCTGCGTCCAACGCCTGTG CGTACCTGAACACAGGGGTTGTGATCAACGAAGCTGGCTACGCTCCCCTGAACGTAATAATAAAGGCTGACAACTACACT TACCACACATTCCAGCTCACATCCATTAGCATGAACGAGCTGGATAGCAAGATACAGGTCAATATCATCATAACGTACTC GGGAAGCGCCGTCCCTGAAGCAACCCTAGAAACCAACATAAAGCAGTACATAGTCAATGACCTTGCCTCAAACACGAACG TTCGGCTGAGCGGGGGCAAGCTGTATTTTGGTGGAAAAGAAGTTGAGATAAACGTGGATGTGGTGAGAAAATGA
Upstream 100 bases:
>100_bases AGTCCCGTGCCAATTTACCGGGAAAGCTCAGTGACCCTCACAGAGGCAGATAGAGAATTCCAGATAGTGGCAACGTACAA CGAGGCGGAGGGAAGGCTGT
Downstream 100 bases:
>100_bases GGCGAGGTCAGCTACTTTCCTTTGACGCGATGCTCTCATTGGTCATAGTTATACTCATGCTGGGAATGATAACCAGCACA TCCAGTGCACTAAAAGATGA
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSISRRRAQTAIEALFIIAIILAGVLIIVPPYLNENRDISLVVYARNSASNACAYLNTGVVINEAGYAPLNVIIKADNYT YHTFQLTSISMNELDSKIQVNIIITYSGSAVPEATLETNIKQYIVNDLASNTNVRLSGGKLYFGGKEVEINVDVVRK
Sequences:
>Translated_157_residues MSISRRRAQTAIEALFIIAIILAGVLIIVPPYLNENRDISLVVYARNSASNACAYLNTGVVINEAGYAPLNVIIKADNYT YHTFQLTSISMNELDSKIQVNIIITYSGSAVPEATLETNIKQYIVNDLASNTNVRLSGGKLYFGGKEVEINVDVVRK >Mature_156_residues SISRRRAQTAIEALFIIAIILAGVLIIVPPYLNENRDISLVVYARNSASNACAYLNTGVVINEAGYAPLNVIIKADNYTY HTFQLTSISMNELDSKIQVNIIITYSGSAVPEATLETNIKQYIVNDLASNTNVRLSGGKLYFGGKEVEINVDVVRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17213; Mature: 17082
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISRRRAQTAIEALFIIAIILAGVLIIVPPYLNENRDISLVVYARNSASNACAYLNTGV CCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCE VINEAGYAPLNVIIKADNYTYHTFQLTSISMNELDSKIQVNIIITYSGSAVPEATLETNI EEECCCCCEEEEEEECCCEEEEEEEEEEEEHHHCCCEEEEEEEEEECCCCCCCHHHHHHH KQYIVNDLASNTNVRLSGGKLYFGGKEVEINVDVVRK HHHHHHHHCCCCEEEEECCEEEECCEEEEEEEEEEEC >Mature Secondary Structure SISRRRAQTAIEALFIIAIILAGVLIIVPPYLNENRDISLVVYARNSASNACAYLNTGV CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCE VINEAGYAPLNVIIKADNYTYHTFQLTSISMNELDSKIQVNIIITYSGSAVPEATLETNI EEECCCCCEEEEEEECCCEEEEEEEEEEEEHHHCCCEEEEEEEEEECCCCCCCHHHHHHH KQYIVNDLASNTNVRLSGGKLYFGGKEVEINVDVVRK HHHHHHHHCCCCEEEEECCEEEECCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA