| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224801
Identifier: 212224801
GI number: 212224801
Start: 1514356
End: 1515084
Strand: Reverse
Name: 212224801
Synonym: TON_1650
Alternate gene names: NA
Gene position: 1515084-1514356 (Counterclockwise)
Preceding gene: 212224811
Following gene: 212224800
Centisome position: 82.0
GC content: 52.54
Gene sequence:
>729_bases ATGGAGAACGGGAAGCCAGTCAAGATAGTTCTGCCAGAGATAAAGGACCCCATTCTCATCGAGGGATATCCCGGAATAGG CCTGGTCGGCCACATAGCGGCCAACTTCTTAGCGAAGGAACTCGGAATGGAGATGGTAGGCTACGTGGAGAGTCCATTCA TTCCTCCGATGGCGCTCATCCTTGAGGGGAAGCCCAACCCACCACTCAGGTTCTACGGAAAAGACAACATAATCCTCGCC GTTGCCGATATCTACGTGCCTCCAACTCTAGTAAGCGAAATAGCCAAGGAACTAGTGAGGTATCTGAAAGATATGAACGC AGCGAAGGTAATTTCTCTTGGAGGCATTGGTATTGGCCTATTCAAGGAGAAAATGGATGTCTGGGGCGTCGGTGCGCGCG AGGAGCTCAACAAGGAGCTGGAAAACTTCGGCGTCAAGATACTCCAGTACGGCTCAATAATGGGCATGAGTGGCAAGCTC CTATGGGAGGCAAGCAAAGAAGGTTTGGACGCCTACGTTCTCCTCGGCGAGACCTTTGGGGACAGACCAGACCCGAGGGC AGCAGCCAACGTTGTTGAGGTTCTCAAGAAGCTGACGCCCATAGAGGTCTCCACGGAGCCTCTTATCAAGGAGGCAGAGA TGATAGAGGAACAGCTCAGAAAAATGCACGAGCAGATGGAGCAGGCGAGGAGAAAGACCGAGAAGCAGTACGAGAGCATC TACCTGTGA
Upstream 100 bases:
>100_bases AAAATCAGGCTTGAGTTATTTAAGACTTGCCTTTCCAGTGGAAATAGAGCTCCGAAACTTTAATAACCTTTAGAAACTAA AAATTTCCTTGGGTGAGAAC
Downstream 100 bases:
>100_bases GGTGAGAGCATGGAGGCGGTGACCTTAGCTGGAATCGCAAGACGCGTTCTGGATGAGCTCCTCAGAAGCCCCTACAAGAC GCTGGAAATCAGAAGCGCGA
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MENGKPVKIVLPEIKDPILIEGYPGIGLVGHIAANFLAKELGMEMVGYVESPFIPPMALILEGKPNPPLRFYGKDNIILA VADIYVPPTLVSEIAKELVRYLKDMNAAKVISLGGIGIGLFKEKMDVWGVGAREELNKELENFGVKILQYGSIMGMSGKL LWEASKEGLDAYVLLGETFGDRPDPRAAANVVEVLKKLTPIEVSTEPLIKEAEMIEEQLRKMHEQMEQARRKTEKQYESI YL
Sequences:
>Translated_242_residues MENGKPVKIVLPEIKDPILIEGYPGIGLVGHIAANFLAKELGMEMVGYVESPFIPPMALILEGKPNPPLRFYGKDNIILA VADIYVPPTLVSEIAKELVRYLKDMNAAKVISLGGIGIGLFKEKMDVWGVGAREELNKELENFGVKILQYGSIMGMSGKL LWEASKEGLDAYVLLGETFGDRPDPRAAANVVEVLKKLTPIEVSTEPLIKEAEMIEEQLRKMHEQMEQARRKTEKQYESI YL >Mature_242_residues MENGKPVKIVLPEIKDPILIEGYPGIGLVGHIAANFLAKELGMEMVGYVESPFIPPMALILEGKPNPPLRFYGKDNIILA VADIYVPPTLVSEIAKELVRYLKDMNAAKVISLGGIGIGLFKEKMDVWGVGAREELNKELENFGVKILQYGSIMGMSGKL LWEASKEGLDAYVLLGETFGDRPDPRAAANVVEVLKKLTPIEVSTEPLIKEAEMIEEQLRKMHEQMEQARRKTEKQYESI YL
Specific function: Unknown
COG id: COG1938
COG function: function code R; Archaeal enzymes of ATP-grasp superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004425 - InterPro: IPR019151 [H]
Pfam domain/function: PF09754 HCCA3 [H]
EC number: NA
Molecular weight: Translated: 26926; Mature: 26926
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENGKPVKIVLPEIKDPILIEGYPGIGLVGHIAANFLAKELGMEMVGYVESPFIPPMALI CCCCCEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE LEGKPNPPLRFYGKDNIILAVADIYVPPTLVSEIAKELVRYLKDMNAAKVISLGGIGIGL EECCCCCCEEEECCCCEEEEEECHHCCHHHHHHHHHHHHHHHHCCCHHHEEEECCCCHHH FKEKMDVWGVGAREELNKELENFGVKILQYGSIMGMSGKLLWEASKEGLDAYVLLGETFG HHHHHHHCCCCCHHHHHHHHHHHCHHHHHHCCEECCCCCEEEECCCCCCEEEEEEECCCC DRPDPRAAANVVEVLKKLTPIEVSTEPLIKEAEMIEEQLRKMHEQMEQARRKTEKQYESI CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YL CC >Mature Secondary Structure MENGKPVKIVLPEIKDPILIEGYPGIGLVGHIAANFLAKELGMEMVGYVESPFIPPMALI CCCCCEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE LEGKPNPPLRFYGKDNIILAVADIYVPPTLVSEIAKELVRYLKDMNAAKVISLGGIGIGL EECCCCCCEEEECCCCEEEEEECHHCCHHHHHHHHHHHHHHHHCCCHHHEEEECCCCHHH FKEKMDVWGVGAREELNKELENFGVKILQYGSIMGMSGKLLWEASKEGLDAYVLLGETFG HHHHHHHCCCCCHHHHHHHHHHHCHHHHHHCCEECCCCCEEEECCCCCCEEEEEEECCCC DRPDPRAAANVVEVLKKLTPIEVSTEPLIKEAEMIEEQLRKMHEQMEQARRKTEKQYESI CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]