| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224800
Identifier: 212224800
GI number: 212224800
Start: 1513966
End: 1514346
Strand: Reverse
Name: 212224800
Synonym: TON_1649
Alternate gene names: NA
Gene position: 1514346-1513966 (Counterclockwise)
Preceding gene: 212224801
Following gene: 212224796
Centisome position: 81.96
GC content: 53.54
Gene sequence:
>381_bases ATGGAGGCGGTGACCTTAGCTGGAATCGCAAGACGCGTTCTGGATGAGCTCCTCAGAAGCCCCTACAAGACGCTGGAAAT CAGAAGCGCGAGGAACGTCGTAGCCCTCGAAAGGGCGCGCGAGCTGGGAAGGGTCTTTCTCACATACGAAACCTACCAGG ACATAACCATCGGAACGGAAGGACTCCTCGCCGAGTTGCTAAAACTCGAGAGCATGGAGCAGCGCATTCCATGGGAGGAG AGCGATGAAAGAGAAATCACAGTCTGCAGGGCGCAATTGAGGCTGCTGGGACTGGGAAGAATCGTCGAGATAAGGAAGAA GAATACAATTTTGTTCGTCAGAGTCAGGGAGATGTTCCCGCAGGAGATGGACATTGGCTAA
Upstream 100 bases:
>100_bases GATGATAGAGGAACAGCTCAGAAAAATGCACGAGCAGATGGAGCAGGCGAGGAGAAAGACCGAGAAGCAGTACGAGAGCA TCTACCTGTGAGGTGAGAGC
Downstream 100 bases:
>100_bases AACAGCGTCGTTTGCCTGCCTTTAGTCACGCTTTCCCTCTTGGGCGGCTGAACCCTTCTGAATTCCAGACCTTCTTTTTC AAGGAGCTTCTTAGCGCCAG
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MEAVTLAGIARRVLDELLRSPYKTLEIRSARNVVALERARELGRVFLTYETYQDITIGTEGLLAELLKLESMEQRIPWEE SDEREITVCRAQLRLLGLGRIVEIRKKNTILFVRVREMFPQEMDIG
Sequences:
>Translated_126_residues MEAVTLAGIARRVLDELLRSPYKTLEIRSARNVVALERARELGRVFLTYETYQDITIGTEGLLAELLKLESMEQRIPWEE SDEREITVCRAQLRLLGLGRIVEIRKKNTILFVRVREMFPQEMDIG >Mature_126_residues MEAVTLAGIARRVLDELLRSPYKTLEIRSARNVVALERARELGRVFLTYETYQDITIGTEGLLAELLKLESMEQRIPWEE SDEREITVCRAQLRLLGLGRIVEIRKKNTILFVRVREMFPQEMDIG
Specific function: Unknown
COG id: COG1935
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14648; Mature: 14648
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAVTLAGIARRVLDELLRSPYKTLEIRSARNVVALERARELGRVFLTYETYQDITIGTE CCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCEECCHH GLLAELLKLESMEQRIPWEESDEREITVCRAQLRLLGLGRIVEIRKKNTILFVRVREMFP HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHEEEECCCCEEEEEEHHHCC QEMDIG CCCCCC >Mature Secondary Structure MEAVTLAGIARRVLDELLRSPYKTLEIRSARNVVALERARELGRVFLTYETYQDITIGTE CCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCEECCHH GLLAELLKLESMEQRIPWEESDEREITVCRAQLRLLGLGRIVEIRKKNTILFVRVREMFP HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHEEEECCCCEEEEEEHHHCC QEMDIG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA