Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224784

Identifier: 212224784

GI number: 212224784

Start: 1492817

End: 1493608

Strand: Reverse

Name: 212224784

Synonym: TON_1633

Alternate gene names: NA

Gene position: 1493608-1492817 (Counterclockwise)

Preceding gene: 212224785

Following gene: 212224776

Centisome position: 80.84

GC content: 46.21

Gene sequence:

>792_bases
ATGGAGTTAAAGGTTTCAATCTGGATCTTTTTTATTGATATCGTACTGTTCATCGTTATCGGATATTCCGCGCTCTACGC
CCTCAGAAGGATATCACGTTACGGTGAACCCCTTAACAGGTTCATCGTTATAGTGGCAGTTTCCATGTTCACGGCTGCGG
CAGGAAGGGCACTTGATATCGTTGACGATTTCACTGGAGAAGTGCCCATTATTATATCTCTAGAGCAGATTCTCTACTTT
CTTTCGATAATCGGTATAGCATATGGACTGTTGAGCTATATAAGCCATGTTGAAAAAACTATTCTTCCGATTCCTGCAAA
TGCCGCTGGGAACGCAAGGCTCTCCCCGGGGGGTTATCTCTACACGGGAGAAGACACAGGAGATCTTGTAGAGTTTATTT
CTTCAATTGACGCTCCAGTGCTTGTAATCACCAGGAGTCCTTGGATATACGAAAATATCGGAGAGCACGTTCAGACGCTC
TGGATAACCCCTGCCATTGACAGGGGGATAGGGCCAACGAAACTTCATGTGATCATGGAGAGTGCAGTGAAGTTTCTCCG
GGGAGGAGGCAGATTGATAGTGGTGGACTGCTTGGAGGCCTTTATCCTGTACAACGACTTTACGGCCACCTTTAGATTCC
TTTCGTCTCTAAAAGACTACGCCGTTGAGGCAAAGTCCACCCTGCTCCTGGTTGTCATTAAAGGAACCATTGGGGAGAAA
GAGCTGAAGATACTCATGAGAGAGTTTACTCCGGTCAAGAGTCCTAAGAACCTCCTCAAAACTTCCTCTTGA

Upstream 100 bases:

>100_bases
TAGCTTACACTGGATTGAGGATGTATCTTGGCGGTGTTAAGTTCAATCTCGAGGAAACTGTGGTAAAGCAGAAGTTTAGG
ACGGATGAGGTGGAGGTTGT

Downstream 100 bases:

>100_bases
TCTTCATTGTGTACTTTGGGTAGACCTCATTCGTGAATCTTACGAATTTTGTCTTTCTCGGGGAGAGTCTTATCGTTATC
TCCGTTTCAGGCTCGAGGTA

Product: membrane protein, conserved

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MELKVSIWIFFIDIVLFIVIGYSALYALRRISRYGEPLNRFIVIVAVSMFTAAAGRALDIVDDFTGEVPIIISLEQILYF
LSIIGIAYGLLSYISHVEKTILPIPANAAGNARLSPGGYLYTGEDTGDLVEFISSIDAPVLVITRSPWIYENIGEHVQTL
WITPAIDRGIGPTKLHVIMESAVKFLRGGGRLIVVDCLEAFILYNDFTATFRFLSSLKDYAVEAKSTLLLVVIKGTIGEK
ELKILMREFTPVKSPKNLLKTSS

Sequences:

>Translated_263_residues
MELKVSIWIFFIDIVLFIVIGYSALYALRRISRYGEPLNRFIVIVAVSMFTAAAGRALDIVDDFTGEVPIIISLEQILYF
LSIIGIAYGLLSYISHVEKTILPIPANAAGNARLSPGGYLYTGEDTGDLVEFISSIDAPVLVITRSPWIYENIGEHVQTL
WITPAIDRGIGPTKLHVIMESAVKFLRGGGRLIVVDCLEAFILYNDFTATFRFLSSLKDYAVEAKSTLLLVVIKGTIGEK
ELKILMREFTPVKSPKNLLKTSS
>Mature_263_residues
MELKVSIWIFFIDIVLFIVIGYSALYALRRISRYGEPLNRFIVIVAVSMFTAAAGRALDIVDDFTGEVPIIISLEQILYF
LSIIGIAYGLLSYISHVEKTILPIPANAAGNARLSPGGYLYTGEDTGDLVEFISSIDAPVLVITRSPWIYENIGEHVQTL
WITPAIDRGIGPTKLHVIMESAVKFLRGGGRLIVVDCLEAFILYNDFTATFRFLSSLKDYAVEAKSTLLLVVIKGTIGEK
ELKILMREFTPVKSPKNLLKTSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29139; Mature: 29139

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKVSIWIFFIDIVLFIVIGYSALYALRRISRYGEPLNRFIVIVAVSMFTAAAGRALDI
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEH
VDDFTGEVPIIISLEQILYFLSIIGIAYGLLSYISHVEKTILPIPANAAGNARLSPGGYL
HHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEECCCCEE
YTGEDTGDLVEFISSIDAPVLVITRSPWIYENIGEHVQTLWITPAIDRGIGPTKLHVIME
EECCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHEECCHHHCCCCHHHHHHHHH
SAVKFLRGGGRLIVVDCLEAFILYNDFTATFRFLSSLKDYAVEAKSTLLLVVIKGTIGEK
HHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHH
ELKILMREFTPVKSPKNLLKTSS
HHHHHHHHCCCCCCCHHHHCCCC
>Mature Secondary Structure
MELKVSIWIFFIDIVLFIVIGYSALYALRRISRYGEPLNRFIVIVAVSMFTAAAGRALDI
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEH
VDDFTGEVPIIISLEQILYFLSIIGIAYGLLSYISHVEKTILPIPANAAGNARLSPGGYL
HHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEECCCCEE
YTGEDTGDLVEFISSIDAPVLVITRSPWIYENIGEHVQTLWITPAIDRGIGPTKLHVIME
EECCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHEECCHHHCCCCHHHHHHHHH
SAVKFLRGGGRLIVVDCLEAFILYNDFTATFRFLSSLKDYAVEAKSTLLLVVIKGTIGEK
HHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHH
ELKILMREFTPVKSPKNLLKTSS
HHHHHHHHCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA