| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224776
Identifier: 212224776
GI number: 212224776
Start: 1483012
End: 1483533
Strand: Reverse
Name: 212224776
Synonym: TON_1625
Alternate gene names: NA
Gene position: 1483533-1483012 (Counterclockwise)
Preceding gene: 212224784
Following gene: 212224775
Centisome position: 80.29
GC content: 51.92
Gene sequence:
>522_bases ATGGGAATCGAGGAAGCCCGTCGAATAGTTATGGAACACTTCGCAAACGCCGCGAGAAGATTCGGCTTTAGTGAGCTTTA TGGCTACATCTACGGTGCTCTCTTCCTGGCTAAGGAACCAATGAGCCTGAGTGAAATAGCCGAGAGGACGGGCTATTCGC TCTCTCACGTGAGTACTGCCCTGAAGTCTATGGAGAGCCTCGGCTTGGTGGTTAGAATCAAGAAGCCTGGCGATAAGAAG GCCTACTACAAAGCGACAAAGCTCCTCAAGGACTGGAGACAGGCTGCCTACTACAGCAGGATTCTTGAAGACATTCAGCA GATGAAGGAGAACCTCATGCGTGCTTTGGAGGAGCTTGAAGGTGAGACCGGCCCCGAGGCGGAGTTCATCAGGGAAAGCA TCGAGTTAGCCATGAAGAGGAACGATCTTGCCGAAAGGATACTCCGCTTTCTCATGAACCACGACGATAAGGAGGTTCTT GAGAGGCTCCTTAAGTGCCTTGAGGGCGAAGAGAAGCGGTAG
Upstream 100 bases:
>100_bases TCCCTCCGAACTTTCGGAAATTTCCGAAAGTTTTAAATATGTGAAGCCTTAAAAACCTTTTCCCGAGATTACTATTATCA CTGGAATCGAGGTGCTGGGC
Downstream 100 bases:
>100_bases CTTTAAAACCAGCTGTTGGTAGTCAAATTGGGGTGGAGGAATGTCGCTGTCGTCGCTGCTGTGGGCATTCTGGTATATTC TTCCCGCTTACTTCGCCAAT
Product: putative transcription regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MGIEEARRIVMEHFANAARRFGFSELYGYIYGALFLAKEPMSLSEIAERTGYSLSHVSTALKSMESLGLVVRIKKPGDKK AYYKATKLLKDWRQAAYYSRILEDIQQMKENLMRALEELEGETGPEAEFIRESIELAMKRNDLAERILRFLMNHDDKEVL ERLLKCLEGEEKR
Sequences:
>Translated_173_residues MGIEEARRIVMEHFANAARRFGFSELYGYIYGALFLAKEPMSLSEIAERTGYSLSHVSTALKSMESLGLVVRIKKPGDKK AYYKATKLLKDWRQAAYYSRILEDIQQMKENLMRALEELEGETGPEAEFIRESIELAMKRNDLAERILRFLMNHDDKEVL ERLLKCLEGEEKR >Mature_172_residues GIEEARRIVMEHFANAARRFGFSELYGYIYGALFLAKEPMSLSEIAERTGYSLSHVSTALKSMESLGLVVRIKKPGDKKA YYKATKLLKDWRQAAYYSRILEDIQQMKENLMRALEELEGETGPEAEFIRESIELAMKRNDLAERILRFLMNHDDKEVLE RLLKCLEGEEKR
Specific function: Unknown
COG id: COG1510
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20116; Mature: 19984
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIEEARRIVMEHFANAARRFGFSELYGYIYGALFLAKEPMSLSEIAERTGYSLSHVSTA CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHH LKSMESLGLVVRIKKPGDKKAYYKATKLLKDWRQAAYYSRILEDIQQMKENLMRALEELE HHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GETGPEAEFIRESIELAMKRNDLAERILRFLMNHDDKEVLERLLKCLEGEEKR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GIEEARRIVMEHFANAARRFGFSELYGYIYGALFLAKEPMSLSEIAERTGYSLSHVSTA CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHH LKSMESLGLVVRIKKPGDKKAYYKATKLLKDWRQAAYYSRILEDIQQMKENLMRALEELE HHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GETGPEAEFIRESIELAMKRNDLAERILRFLMNHDDKEVLERLLKCLEGEEKR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA