| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224679
Identifier: 212224679
GI number: 212224679
Start: 1402483
End: 1402734
Strand: Reverse
Name: 212224679
Synonym: TON_1528
Alternate gene names: NA
Gene position: 1402734-1402483 (Counterclockwise)
Preceding gene: 212224680
Following gene: 212224676
Centisome position: 75.92
GC content: 59.13
Gene sequence:
>252_bases ATGAGCGAGCTGATTCACCAGATTGTGCAGGTTCTCAAGGAGCAGGTCGTCCAGGACACTGTCGTTCCGAGGAACATTAG GAGAGCCGCCGAGCAGGCCATAGAGGTCCTCCTCGACGAGAGCAAGGAGCCGGCCGTCAGGGCCGCCGACGCGATAGCCA TCCTCGAGGAGATTAGCGAGGATCCGAACATGCCTATGCACACGAGGACCATCATCTGGGAGGTCCTCGGAGCCCTTGAG CAGGTTAAGTGA
Upstream 100 bases:
>100_bases TCTTTAGTTTCGACGTTAACCGAAAAGTTTTTTAGTTAGGAAAGCTTAAGATAACCCGAGGAGATTTTAGTAACAATTCT TTAGAAAAGGGGGTGATAGA
Downstream 100 bases:
>100_bases GCGCTTTTACTTTTCCCGCTCATTTCCTGCGTTTGATGGTTCTCTTCTTCCGTGTGTTTGATAATCATTTTCTGAGCAGA TACCACAGCTTTGCGCTCTC
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MSELIHQIVQVLKEQVVQDTVVPRNIRRAAEQAIEVLLDESKEPAVRAADAIAILEEISEDPNMPMHTRTIIWEVLGALE QVK
Sequences:
>Translated_83_residues MSELIHQIVQVLKEQVVQDTVVPRNIRRAAEQAIEVLLDESKEPAVRAADAIAILEEISEDPNMPMHTRTIIWEVLGALE QVK >Mature_82_residues SELIHQIVQVLKEQVVQDTVVPRNIRRAAEQAIEVLLDESKEPAVRAADAIAILEEISEDPNMPMHTRTIIWEVLGALEQ VK
Specific function: Unknown
COG id: COG1698
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0147 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023130 - InterPro: IPR005354 - ProDom: PD029943 [H]
Pfam domain/function: PF03685 UPF0147 [H]
EC number: NA
Molecular weight: Translated: 9367; Mature: 9236
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELIHQIVQVLKEQVVQDTVVPRNIRRAAEQAIEVLLDESKEPAVRAADAIAILEEISE CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC DPNMPMHTRTIIWEVLGALEQVK CCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SELIHQIVQVLKEQVVQDTVVPRNIRRAAEQAIEVLLDESKEPAVRAADAIAILEEISE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC DPNMPMHTRTIIWEVLGALEQVK CCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA