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The map label for this gene is tfx

Identifier: 212224676

GI number: 212224676

Start: 1400553

End: 1400993

Strand: Reverse

Name: tfx

Synonym: TON_1525

Alternate gene names: NA

Gene position: 1400993-1400553 (Counterclockwise)

Preceding gene: 212224679

Following gene: 212224673

Centisome position: 75.83

GC content: 51.02

Gene sequence:

>441_bases
ATGGGAAGTAAGAGCTTCCTAACGGAGCAGCAGATTAAGATCCTCCGTCTGCGCGCTAGGGGTTTGAAACAGAGCGAGAT
AGCCGAGCTTTTAGGCACGAGCAGGGCTAACATAAGCATTCTTGAGAGAAGGGCCCTTGAAAAGATTGAGAAAGCTAGGA
ACACCATCACCATCTGGGAGCAGATAAACTCCAAGATAAGTGTTGAGGTCAGGAAGGGGGAGGACATCTTCACAGTCCCT
GACAAACTCTTCAAGAAGGCGGACGAGCTTCAGATCAAGGTTCCTTACAGCACGGCGGAGATAATAGCCTTCCTCGTCGA
GCACGCGCCAATAAGCGACAGAATAGCCAAGCGTGACTTCACGCTGTTCCTGGACGCCAGGGACAGGTTGAGGATAAGCG
AGTGCCTACTTGAGGAGTTCGATGAGATAGGGAAGCAATAG

Upstream 100 bases:

>100_bases
CTGGAATTCTTGCCCTCTCTTCCTAGATTACGTTGAAGTCTTGCCTTTGGTATGGAAAAAGTTTTAACCCATTGATACAT
GTTAAACTCTGGTGTTTAAA

Downstream 100 bases:

>100_bases
AGACGTGAAGACGCCGTTAAGGGCCATAGCCAATCCGCTCACCGCCCCGGCCAGCTCGTCGTCGAGGATTATCCTAGCCG
TCCCGAGGCCATGGGAAGTA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MGSKSFLTEQQIKILRLRARGLKQSEIAELLGTSRANISILERRALEKIEKARNTITIWEQINSKISVEVRKGEDIFTVP
DKLFKKADELQIKVPYSTAEIIAFLVEHAPISDRIAKRDFTLFLDARDRLRISECLLEEFDEIGKQ

Sequences:

>Translated_146_residues
MGSKSFLTEQQIKILRLRARGLKQSEIAELLGTSRANISILERRALEKIEKARNTITIWEQINSKISVEVRKGEDIFTVP
DKLFKKADELQIKVPYSTAEIIAFLVEHAPISDRIAKRDFTLFLDARDRLRISECLLEEFDEIGKQ
>Mature_145_residues
GSKSFLTEQQIKILRLRARGLKQSEIAELLGTSRANISILERRALEKIEKARNTITIWEQINSKISVEVRKGEDIFTVPD
KLFKKADELQIKVPYSTAEIIAFLVEHAPISDRIAKRDFTLFLDARDRLRISECLLEEFDEIGKQ

Specific function: Putative transcriptional regulator [H]

COG id: COG1356

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfx family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007630
- InterPro:   IPR004645
- InterPro:   IPR018384
- InterPro:   IPR000792 [H]

Pfam domain/function: PF04545 Sigma70_r4 [H]

EC number: NA

Molecular weight: Translated: 16844; Mature: 16713

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSKSFLTEQQIKILRLRARGLKQSEIAELLGTSRANISILERRALEKIEKARNTITIWE
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHH
QINSKISVEVRKGEDIFTVPDKLFKKADELQIKVPYSTAEIIAFLVEHAPISDRIAKRDF
HCCCEEEEEEECCCCEEECCHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHCCE
TLFLDARDRLRISECLLEEFDEIGKQ
EEEECCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GSKSFLTEQQIKILRLRARGLKQSEIAELLGTSRANISILERRALEKIEKARNTITIWE
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHH
QINSKISVEVRKGEDIFTVPDKLFKKADELQIKVPYSTAEIIAFLVEHAPISDRIAKRDF
HCCCEEEEEEECCCCEEECCHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHCCE
TLFLDARDRLRISECLLEEFDEIGKQ
EEEECCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA