| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212224380
Identifier: 212224380
GI number: 212224380
Start: 1122877
End: 1123473
Strand: Reverse
Name: 212224380
Synonym: TON_1231
Alternate gene names: NA
Gene position: 1123473-1122877 (Counterclockwise)
Preceding gene: 212224382
Following gene: 212224378
Centisome position: 60.81
GC content: 53.27
Gene sequence:
>597_bases ATGGAGTCAAATAAGAACATGGGACGATTGCTTGACATACTAGGAAACGAGACGCGAAGAAGGATACTCATCCTGCTCAC CAGGAGGCCGTACTTTGTGAGCGAGCTTAGTCAGGAGCTTGGTGTTGGCCAGAAGGCCGTTTTGGAGCACCTCAGAATAC TTGAGAGTGCGGGACTGATTGAAGGTAGGGTGGAGAAGATCCCGCGTGGCAGACCGAGGAAGTACTACACGATAAAGCGC GGCTTCCGTTTAGAGGTTCTCCTGACGCCGTATGCCTTTGGAACAGAGATGTACGAGCCAAAGGCGCCAAGGCCCACCCG CGAGTATGCTCAGGCGAGGGCGCTGATAAAGTCTACCGAGCCAGTGGAGGACAAGATTAGAGAGCTCGTGATGTTCCTCG CCGAGATTCAGGAAAGGATTGAGGAGCTCATAATGACAAAGCAGGAGCTTGAAGAGGTCCGCCTTATCACCGAGACCTAC ATAGAGAATCTCCTGCGGAGAATAGCCCAGGAGAACGAGCGCGAATTCGAGAGACTCATGCGCGAGTTTGGCCCGAGGCT CCCTAGGAAGATACTGGAAGACCTCGACGACTTTTAG
Upstream 100 bases:
>100_bases GGTAATTCTTTCGATGCCTTTTAAAGTTGGGCATCCAAACCGAAAAGCTTAAAGTGGCCTTTTCTTACATTAAGTTAGGG AAAGATAAGGGGGTGAGAGC
Downstream 100 bases:
>100_bases AAAGCGGCTGGAGAAGGAGAAAGTTAAAGCTCAGAAAAACGAGGGATAGGGCATTCAGAGCATCTTGCCCTCTTCTTTCA TTCTCACGAGCCTGGTGATG
Product: heat shock regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; Transcriptional Regulator ArsR Family; Conditioned Medium-Induced; Transcriptional Regulator Arsr Family; Transcription Regulator; Archaeal Heat Shock Regulator ArsR Family; Archaeal Heat Shock Regulator; Hth5 Family Protein; ArS Family Heat Shock Protein; Heat Shock Regulator
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MESNKNMGRLLDILGNETRRRILILLTRRPYFVSELSQELGVGQKAVLEHLRILESAGLIEGRVEKIPRGRPRKYYTIKR GFRLEVLLTPYAFGTEMYEPKAPRPTREYAQARALIKSTEPVEDKIRELVMFLAEIQERIEELIMTKQELEEVRLITETY IENLLRRIAQENEREFERLMREFGPRLPRKILEDLDDF
Sequences:
>Translated_198_residues MESNKNMGRLLDILGNETRRRILILLTRRPYFVSELSQELGVGQKAVLEHLRILESAGLIEGRVEKIPRGRPRKYYTIKR GFRLEVLLTPYAFGTEMYEPKAPRPTREYAQARALIKSTEPVEDKIRELVMFLAEIQERIEELIMTKQELEEVRLITETY IENLLRRIAQENEREFERLMREFGPRLPRKILEDLDDF >Mature_198_residues MESNKNMGRLLDILGNETRRRILILLTRRPYFVSELSQELGVGQKAVLEHLRILESAGLIEGRVEKIPRGRPRKYYTIKR GFRLEVLLTPYAFGTEMYEPKAPRPTREYAQARALIKSTEPVEDKIRELVMFLAEIQERIEELIMTKQELEEVRLITETY IENLLRRIAQENEREFERLMREFGPRLPRKILEDLDDF
Specific function: Unknown
COG id: COG1777
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23533; Mature: 23533
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESNKNMGRLLDILGNETRRRILILLTRRPYFVSELSQELGVGQKAVLEHLRILESAGLI CCCCCHHHHHHHHHCCHHHHHEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHH EGRVEKIPRGRPRKYYTIKRGFRLEVLLTPYAFGTEMYEPKAPRPTREYAQARALIKSTE HHHHHHCCCCCCCCEEEECCCCEEEEEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC PVEDKIRELVMFLAEIQERIEELIMTKQELEEVRLITETYIENLLRRIAQENEREFERLM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH REFGPRLPRKILEDLDDF HHHCCCCHHHHHHHHCCC >Mature Secondary Structure MESNKNMGRLLDILGNETRRRILILLTRRPYFVSELSQELGVGQKAVLEHLRILESAGLI CCCCCHHHHHHHHHCCHHHHHEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHH EGRVEKIPRGRPRKYYTIKRGFRLEVLLTPYAFGTEMYEPKAPRPTREYAQARALIKSTE HHHHHHCCCCCCCCEEEECCCCEEEEEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC PVEDKIRELVMFLAEIQERIEELIMTKQELEEVRLITETYIENLLRRIAQENEREFERLM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH REFGPRLPRKILEDLDDF HHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA