Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224378

Identifier: 212224378

GI number: 212224378

Start: 1122089

End: 1122508

Strand: Reverse

Name: 212224378

Synonym: TON_1229

Alternate gene names: NA

Gene position: 1122508-1122089 (Counterclockwise)

Preceding gene: 212224380

Following gene: 212224377

Centisome position: 60.75

GC content: 49.76

Gene sequence:

>420_bases
ATGCTCAGGGAAATCATCCGCTGCCGGGGTCACGAGAACGTTAGGGCCACTCACAAGTCCACGCTTGAGTTTACAAAGGA
GGACTACCTGACCCCGAGAGGAGATTGCATACTCTGTATTGAAGCTGACAAAGGAATAAACGACCTGAGTGAGGAGTTTA
AGCGAGCGCTGAAAGAAGGAAAGAGGCTCCTCATAAGGATAAAAATCGCTGACCTTATCGACGAAGTTCTCGCCGAGGGG
AGCCCCAGGCTGATTCTCGAACATCCCTACTCCATGGTCGTCAGGAAGAGCGACTACATCGATGGAAGAACCCTTGCGAT
AAAAGCGAACAAAGCCGCTAGAGACATAGACAGGCGCATCGTTGAGCTTCTAAAGAACCCAAAAACTGTTGCTGAGATAG
AGCTGATTATCCTCGACTGA

Upstream 100 bases:

>100_bases
CCCGTTAGCTTGAGTTTGACAACCATATGCCCAATCTCGAAAGCTGTTTTAAAACTTTTCCCCGGCTCAGGCTTATAAAC
CCTCTCTCAAAACCTGAACC

Downstream 100 bases:

>100_bases
GGGTATCCTGTGCTTCTTTCTCCATGCTCTAGCACTGGGAATAAACCTTTAAATACTCTTGGCTATTTTATTAACTTTTG
GTGATGAAAATGCTCGAAGG

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MLREIIRCRGHENVRATHKSTLEFTKEDYLTPRGDCILCIEADKGINDLSEEFKRALKEGKRLLIRIKIADLIDEVLAEG
SPRLILEHPYSMVVRKSDYIDGRTLAIKANKAARDIDRRIVELLKNPKTVAEIELIILD

Sequences:

>Translated_139_residues
MLREIIRCRGHENVRATHKSTLEFTKEDYLTPRGDCILCIEADKGINDLSEEFKRALKEGKRLLIRIKIADLIDEVLAEG
SPRLILEHPYSMVVRKSDYIDGRTLAIKANKAARDIDRRIVELLKNPKTVAEIELIILD
>Mature_139_residues
MLREIIRCRGHENVRATHKSTLEFTKEDYLTPRGDCILCIEADKGINDLSEEFKRALKEGKRLLIRIKIADLIDEVLAEG
SPRLILEHPYSMVVRKSDYIDGRTLAIKANKAARDIDRRIVELLKNPKTVAEIELIILD

Specific function: Unknown

COG id: COG2090

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007171
- InterPro:   IPR023131 [H]

Pfam domain/function: PF04027 DUF371 [H]

EC number: NA

Molecular weight: Translated: 15966; Mature: 15966

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLREIIRCRGHENVRATHKSTLEFTKEDYLTPRGDCILCIEADKGINDLSEEFKRALKEG
CHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC
KRLLIRIKIADLIDEVLAEGSPRLILEHPYSMVVRKSDYIDGRTLAIKANKAARDIDRRI
CEEEEEEHHHHHHHHHHHCCCCEEEEECCHHHEEECCCCCCCEEEEEECCCHHHHHHHHH
VELLKNPKTVAEIELIILD
HHHHHCCCCEEEEEEEEEC
>Mature Secondary Structure
MLREIIRCRGHENVRATHKSTLEFTKEDYLTPRGDCILCIEADKGINDLSEEFKRALKEG
CHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC
KRLLIRIKIADLIDEVLAEGSPRLILEHPYSMVVRKSDYIDGRTLAIKANKAARDIDRRI
CEEEEEEHHHHHHHHHHHCCCCEEEEECCHHHEEECCCCCCCEEEEEECCCHHHHHHHHH
VELLKNPKTVAEIELIILD
HHHHHCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]