| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212224378
Identifier: 212224378
GI number: 212224378
Start: 1122089
End: 1122508
Strand: Reverse
Name: 212224378
Synonym: TON_1229
Alternate gene names: NA
Gene position: 1122508-1122089 (Counterclockwise)
Preceding gene: 212224380
Following gene: 212224377
Centisome position: 60.75
GC content: 49.76
Gene sequence:
>420_bases ATGCTCAGGGAAATCATCCGCTGCCGGGGTCACGAGAACGTTAGGGCCACTCACAAGTCCACGCTTGAGTTTACAAAGGA GGACTACCTGACCCCGAGAGGAGATTGCATACTCTGTATTGAAGCTGACAAAGGAATAAACGACCTGAGTGAGGAGTTTA AGCGAGCGCTGAAAGAAGGAAAGAGGCTCCTCATAAGGATAAAAATCGCTGACCTTATCGACGAAGTTCTCGCCGAGGGG AGCCCCAGGCTGATTCTCGAACATCCCTACTCCATGGTCGTCAGGAAGAGCGACTACATCGATGGAAGAACCCTTGCGAT AAAAGCGAACAAAGCCGCTAGAGACATAGACAGGCGCATCGTTGAGCTTCTAAAGAACCCAAAAACTGTTGCTGAGATAG AGCTGATTATCCTCGACTGA
Upstream 100 bases:
>100_bases CCCGTTAGCTTGAGTTTGACAACCATATGCCCAATCTCGAAAGCTGTTTTAAAACTTTTCCCCGGCTCAGGCTTATAAAC CCTCTCTCAAAACCTGAACC
Downstream 100 bases:
>100_bases GGGTATCCTGTGCTTCTTTCTCCATGCTCTAGCACTGGGAATAAACCTTTAAATACTCTTGGCTATTTTATTAACTTTTG GTGATGAAAATGCTCGAAGG
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MLREIIRCRGHENVRATHKSTLEFTKEDYLTPRGDCILCIEADKGINDLSEEFKRALKEGKRLLIRIKIADLIDEVLAEG SPRLILEHPYSMVVRKSDYIDGRTLAIKANKAARDIDRRIVELLKNPKTVAEIELIILD
Sequences:
>Translated_139_residues MLREIIRCRGHENVRATHKSTLEFTKEDYLTPRGDCILCIEADKGINDLSEEFKRALKEGKRLLIRIKIADLIDEVLAEG SPRLILEHPYSMVVRKSDYIDGRTLAIKANKAARDIDRRIVELLKNPKTVAEIELIILD >Mature_139_residues MLREIIRCRGHENVRATHKSTLEFTKEDYLTPRGDCILCIEADKGINDLSEEFKRALKEGKRLLIRIKIADLIDEVLAEG SPRLILEHPYSMVVRKSDYIDGRTLAIKANKAARDIDRRIVELLKNPKTVAEIELIILD
Specific function: Unknown
COG id: COG2090
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007171 - InterPro: IPR023131 [H]
Pfam domain/function: PF04027 DUF371 [H]
EC number: NA
Molecular weight: Translated: 15966; Mature: 15966
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLREIIRCRGHENVRATHKSTLEFTKEDYLTPRGDCILCIEADKGINDLSEEFKRALKEG CHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC KRLLIRIKIADLIDEVLAEGSPRLILEHPYSMVVRKSDYIDGRTLAIKANKAARDIDRRI CEEEEEEHHHHHHHHHHHCCCCEEEEECCHHHEEECCCCCCCEEEEEECCCHHHHHHHHH VELLKNPKTVAEIELIILD HHHHHCCCCEEEEEEEEEC >Mature Secondary Structure MLREIIRCRGHENVRATHKSTLEFTKEDYLTPRGDCILCIEADKGINDLSEEFKRALKEG CHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC KRLLIRIKIADLIDEVLAEGSPRLILEHPYSMVVRKSDYIDGRTLAIKANKAARDIDRRI CEEEEEEHHHHHHHHHHHCCCCEEEEECCHHHEEECCCCCCCEEEEEECCCHHHHHHHHH VELLKNPKTVAEIELIILD HHHHHCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]