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The map label for this gene is gspE [C]

Identifier: 212224328

GI number: 212224328

Start: 1077093

End: 1078733

Strand: Reverse

Name: gspE [C]

Synonym: TON_1179

Alternate gene names: 212224328

Gene position: 1078733-1077093 (Counterclockwise)

Preceding gene: 212224329

Following gene: 212224327

Centisome position: 58.39

GC content: 52.71

Gene sequence:

>1641_bases
ATGGCGCAGGCGTTCAGCGACACCTTTGAGGAAGCGATGGCGAGGAACCCGCATCTCAGAAAGTATGTTGACCAGTTCAG
GCGTAAGTACGGTAAGTTGCCTGAGTTTCACGCCCAGCTCAGCAGGGACATGAAGGAAATCCTCTACCCCAACATACTCT
ACCCCGTCGGTGATCCGATATTCATCCACATCTACGGCGACCCTGCCACCGCCGAAAAGAAGTACATCGTCATAGAGCCC
CGTATCGAAAGCAGGGAAGAGGAGCAAAAGTACAGCATGATCCGCGACAAGATACTGGAGCTGGCCCCATCGAGGGAGAT
ACCGGAAGAGCAGGAGGAGTTCGAGCGCTTTCTTGATGCCCTCTTCGACGAGGCGGTGTTGGCCCTCATCAAGTCGAGCA
AGGGCGGCCTCTTCAGCAGAGGACAGCGCTTCACGATCACCAAGGACGAGATGGAGAAGTTCCGCTACCTCATCAAGCGC
GATATCATCGGAATTGGCCCCCTCGAGCCGATAGCCAGGGACCCCTATATTGAGGACATCCATATCATCGGTGCCAACAA
TGTCTCTCTTGTTCATAAAATATTCGAGATGATGCAGACCAACATAACCTTCGGCGACGACGTCAAGCTAGCCGACTACT
TCAAGAACATATCTGAGCGCATCGGAAGGCCTGTAAGTGATAGAACGCCCATCGTTGACGGTGCTCTCCCAGACGGTTCC
CGTATCAACATAATCTACTCACCGGACATATCCATCAAGGGCCCAAGCGCAACCATCCGTAAGTTCTCGGCAACTCCGAT
AAGCATTGTTCAACTGATAGCCTGGGGAACGCTGAGCGCCGAGGTTGCCGCCTACCTTTGGATAGCCCTCGAATACGGTA
TGAGTGTCTTTGTCTGTGGTGAAACAGCTTCCGGTAAGACTACGCTTTTGAACTCGATTATTCCCTTCATCAAACCTGGC
TCAAAGATATACACTGCCGAGGATACGCCAGAGGTTCAGGTTCCGCATCCGGTGTGGCAGCGCCTTATAACCCGTGAGCG
CGGTCCTGAGGAAAGCAGGGTTACGCTCTTTGACCTCCTAAAGGCGGCACTCCGTTCAAGGCCGAACTACATAATCGTCG
GTGAGATCCGTGGCGCTGAGGGTGCCATCGCGTTCCAGGCCATGCAGACAGGCCATCCTGTCATGAGCACCTTCCACGCG
GGTGACATTAAGAAGATGATACAGCGTTTCACTGGGCATCCGATCAACGTCCCGATAACATTCATTGACAACCTTAACAT
AGCAGTCTTCCAGCAGGCGGTCTATGTCAAGGGTAAGTTCCTTAGGAGGACCATCAACGTCGTCGAGATCGAGGGCTACT
ACGAGGAGCTCGGCGGTGTGGCCACAAGGAACGTCTTCGAGTGGGATCCAGTATCAGACAGGCACATCTTCCGTGGTTTC
AACAACTCTTACATCTTAGAGAGGAAGATAGCCGAAATAGCGGGCTACGAGGACCCAAAGGAGATTTACAATGAGCTATT
CCTACGTGCGAAGATCCTTCAGAGGATGGTCGAACTGGGTATAACAAACTACTGGGACGTCTACAGGGAGATCAAGGCAT
TCTACCAGCGCGGTATTGAGGGACTGAGCTTTAGAATCTGA

Upstream 100 bases:

>100_bases
GTCAAGTACAACAACGCCAAGGGCATATTCCAGAAGATTATCCCGTTCCGCGTGGAGCCGAAGGTTGGACTGATAGTAGA
AATTGCGGCGGTGGTGTAAT

Downstream 100 bases:

>100_bases
CGAGGTGAGGGTTATGAGTGACGGGAAGATCAGCATCTTCACTAAGGCAGACCTTGACATGGGGACATACCTAAGGAAAG
TGCTCCTACCCTACATGGCC

Product: flagella-related protein I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 545

Protein sequence:

>546_residues
MAQAFSDTFEEAMARNPHLRKYVDQFRRKYGKLPEFHAQLSRDMKEILYPNILYPVGDPIFIHIYGDPATAEKKYIVIEP
RIESREEEQKYSMIRDKILELAPSREIPEEQEEFERFLDALFDEAVLALIKSSKGGLFSRGQRFTITKDEMEKFRYLIKR
DIIGIGPLEPIARDPYIEDIHIIGANNVSLVHKIFEMMQTNITFGDDVKLADYFKNISERIGRPVSDRTPIVDGALPDGS
RINIIYSPDISIKGPSATIRKFSATPISIVQLIAWGTLSAEVAAYLWIALEYGMSVFVCGETASGKTTLLNSIIPFIKPG
SKIYTAEDTPEVQVPHPVWQRLITRERGPEESRVTLFDLLKAALRSRPNYIIVGEIRGAEGAIAFQAMQTGHPVMSTFHA
GDIKKMIQRFTGHPINVPITFIDNLNIAVFQQAVYVKGKFLRRTINVVEIEGYYEELGGVATRNVFEWDPVSDRHIFRGF
NNSYILERKIAEIAGYEDPKEIYNELFLRAKILQRMVELGITNYWDVYREIKAFYQRGIEGLSFRI

Sequences:

>Translated_546_residues
MAQAFSDTFEEAMARNPHLRKYVDQFRRKYGKLPEFHAQLSRDMKEILYPNILYPVGDPIFIHIYGDPATAEKKYIVIEP
RIESREEEQKYSMIRDKILELAPSREIPEEQEEFERFLDALFDEAVLALIKSSKGGLFSRGQRFTITKDEMEKFRYLIKR
DIIGIGPLEPIARDPYIEDIHIIGANNVSLVHKIFEMMQTNITFGDDVKLADYFKNISERIGRPVSDRTPIVDGALPDGS
RINIIYSPDISIKGPSATIRKFSATPISIVQLIAWGTLSAEVAAYLWIALEYGMSVFVCGETASGKTTLLNSIIPFIKPG
SKIYTAEDTPEVQVPHPVWQRLITRERGPEESRVTLFDLLKAALRSRPNYIIVGEIRGAEGAIAFQAMQTGHPVMSTFHA
GDIKKMIQRFTGHPINVPITFIDNLNIAVFQQAVYVKGKFLRRTINVVEIEGYYEELGGVATRNVFEWDPVSDRHIFRGF
NNSYILERKIAEIAGYEDPKEIYNELFLRAKILQRMVELGITNYWDVYREIKAFYQRGIEGLSFRI
>Mature_545_residues
AQAFSDTFEEAMARNPHLRKYVDQFRRKYGKLPEFHAQLSRDMKEILYPNILYPVGDPIFIHIYGDPATAEKKYIVIEPR
IESREEEQKYSMIRDKILELAPSREIPEEQEEFERFLDALFDEAVLALIKSSKGGLFSRGQRFTITKDEMEKFRYLIKRD
IIGIGPLEPIARDPYIEDIHIIGANNVSLVHKIFEMMQTNITFGDDVKLADYFKNISERIGRPVSDRTPIVDGALPDGSR
INIIYSPDISIKGPSATIRKFSATPISIVQLIAWGTLSAEVAAYLWIALEYGMSVFVCGETASGKTTLLNSIIPFIKPGS
KIYTAEDTPEVQVPHPVWQRLITRERGPEESRVTLFDLLKAALRSRPNYIIVGEIRGAEGAIAFQAMQTGHPVMSTFHAG
DIKKMIQRFTGHPINVPITFIDNLNIAVFQQAVYVKGKFLRRTINVVEIEGYYEELGGVATRNVFEWDPVSDRHIFRGFN
NSYILERKIAEIAGYEDPKEIYNELFLRAKILQRMVELGITNYWDVYREIKAFYQRGIEGLSFRI

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG0630

COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 62554; Mature: 62423

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQAFSDTFEEAMARNPHLRKYVDQFRRKYGKLPEFHAQLSRDMKEILYPNILYPVGDPI
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEECCCCEE
FIHIYGDPATAEKKYIVIEPRIESREEEQKYSMIRDKILELAPSREIPEEQEEFERFLDA
EEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LFDEAVLALIKSSKGGLFSRGQRFTITKDEMEKFRYLIKRDIIGIGPLEPIARDPYIEDI
HHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
HIIGANNVSLVHKIFEMMQTNITFGDDVKLADYFKNISERIGRPVSDRTPIVDGALPDGS
EEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
RINIIYSPDISIKGPSATIRKFSATPISIVQLIAWGTLSAEVAAYLWIALEYGMSVFVCG
EEEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEC
ETASGKTTLLNSIIPFIKPGSKIYTAEDTPEVQVPHPVWQRLITRERGPEESRVTLFDLL
CCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
KAALRSRPNYIIVGEIRGAEGAIAFQAMQTGHPVMSTFHAGDIKKMIQRFTGHPINVPIT
HHHHHCCCCEEEEEEECCCCCCEEEHHHHCCCHHHHHHCHHHHHHHHHHHCCCCCEEEEE
FIDNLNIAVFQQAVYVKGKFLRRTINVVEIEGYYEELGGVATRNVFEWDPVSDRHIFRGF
EECCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHCCHHCCCCCCCCCCCCCHHHCCC
NNSYILERKIAEIAGYEDPKEIYNELFLRAKILQRMVELGITNYWDVYREIKAFYQRGIE
CCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
GLSFRI
CCCCCC
>Mature Secondary Structure 
AQAFSDTFEEAMARNPHLRKYVDQFRRKYGKLPEFHAQLSRDMKEILYPNILYPVGDPI
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEECCCCEE
FIHIYGDPATAEKKYIVIEPRIESREEEQKYSMIRDKILELAPSREIPEEQEEFERFLDA
EEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LFDEAVLALIKSSKGGLFSRGQRFTITKDEMEKFRYLIKRDIIGIGPLEPIARDPYIEDI
HHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
HIIGANNVSLVHKIFEMMQTNITFGDDVKLADYFKNISERIGRPVSDRTPIVDGALPDGS
EEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
RINIIYSPDISIKGPSATIRKFSATPISIVQLIAWGTLSAEVAAYLWIALEYGMSVFVCG
EEEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEC
ETASGKTTLLNSIIPFIKPGSKIYTAEDTPEVQVPHPVWQRLITRERGPEESRVTLFDLL
CCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
KAALRSRPNYIIVGEIRGAEGAIAFQAMQTGHPVMSTFHAGDIKKMIQRFTGHPINVPIT
HHHHHCCCCEEEEEEECCCCCCEEEHHHHCCCHHHHHHCHHHHHHHHHHHCCCCCEEEEE
FIDNLNIAVFQQAVYVKGKFLRRTINVVEIEGYYEELGGVATRNVFEWDPVSDRHIFRGF
EECCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHCCHHCCCCCCCCCCCCCHHHCCC
NNSYILERKIAEIAGYEDPKEIYNELFLRAKILQRMVELGITNYWDVYREIKAFYQRGIE
CCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
GLSFRI
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]