Click here to switch to the map view.

The map label for this gene is flaH [H]

Identifier: 212224329

GI number: 212224329

Start: 1078735

End: 1079433

Strand: Reverse

Name: flaH [H]

Synonym: TON_1180

Alternate gene names: 212224329

Gene position: 1079433-1078735 (Counterclockwise)

Preceding gene: 212224330

Following gene: 212224328

Centisome position: 58.42

GC content: 52.5

Gene sequence:

>699_bases
TTGGTCGAGGAACTCCTCAAGATTGAGCTTAAGGGCGATGAGCTCCACAGGCGTCTCGGCGGGGGCATTCCCGCGGGCAC
CATCATGCTCGTCGAGGGTGACAGGGGTAGCGGTAAGTCCATATTTGTTCAGCGCCTTCTCTATGGCTTTCTCATGAACG
GCTACACCGCCAGTTACATCTCAAGTCAGTACACTACCGTTGAGTACATAAAGCAGATGGAGTCCCTCGGTTATGGTATA
ATCCCCTTTCTAATCAGGAAGAAGCTCATGTTCGTCTCTCTTTACCCACTACTCACTGGTGTGAGTGAGAAGAGAAAGTT
CTTTAGCAGACTCTTCGGGGAGCCCCGCCTCTGGGAGCCGGACATCATGATCATTGATTCATTCTCCTCCCTCTTCTCCC
GCGAGCAGGACCCAAGCGCTGTCCGCGACTTCCTCCTCTACGTCAAGAAGATGGCCTCCCTCGGCAAGGTGATAATACTC
ACCGCCAATACCGAGGAAGTCGACAGGGATTCCCTCTTCGTCCTTGAGGAAGCCTCCACCATGCTGATAAGGCTCAGCGT
TAAGGTCTTCGGTGGTGATCTCAAAAACTCGGCAACTATAGTCAAGTACAACAACGCCAAGGGCATATTCCAGAAGATTA
TCCCGTTCCGCGTGGAGCCGAAGGTTGGACTGATAGTAGAAATTGCGGCGGTGGTGTAA

Upstream 100 bases:

>100_bases
CTTGAAAACGGCAAGAGGCGCAGCCTGGTCTTCAAGGCCCCATGACGTCGGCGGCCTTTATCATCCTCGGGTAAAATAAC
GCGAGACGGTGGTGGTCATC

Downstream 100 bases:

>100_bases
TATGGCGCAGGCGTTCAGCGACACCTTTGAGGAAGCGATGGCGAGGAACCCGCATCTCAGAAAGTATGTTGACCAGTTCA
GGCGTAAGTACGGTAAGTTG

Product: flagellar accessory protein FlaH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MVEELLKIELKGDELHRRLGGGIPAGTIMLVEGDRGSGKSIFVQRLLYGFLMNGYTASYISSQYTTVEYIKQMESLGYGI
IPFLIRKKLMFVSLYPLLTGVSEKRKFFSRLFGEPRLWEPDIMIIDSFSSLFSREQDPSAVRDFLLYVKKMASLGKVIIL
TANTEEVDRDSLFVLEEASTMLIRLSVKVFGGDLKNSATIVKYNNAKGIFQKIIPFRVEPKVGLIVEIAAVV

Sequences:

>Translated_232_residues
MVEELLKIELKGDELHRRLGGGIPAGTIMLVEGDRGSGKSIFVQRLLYGFLMNGYTASYISSQYTTVEYIKQMESLGYGI
IPFLIRKKLMFVSLYPLLTGVSEKRKFFSRLFGEPRLWEPDIMIIDSFSSLFSREQDPSAVRDFLLYVKKMASLGKVIIL
TANTEEVDRDSLFVLEEASTMLIRLSVKVFGGDLKNSATIVKYNNAKGIFQKIIPFRVEPKVGLIVEIAAVV
>Mature_232_residues
MVEELLKIELKGDELHRRLGGGIPAGTIMLVEGDRGSGKSIFVQRLLYGFLMNGYTASYISSQYTTVEYIKQMESLGYGI
IPFLIRKKLMFVSLYPLLTGVSEKRKFFSRLFGEPRLWEPDIMIIDSFSSLFSREQDPSAVRDFLLYVKKMASLGKVIIL
TANTEEVDRDSLFVLEEASTMLIRLSVKVFGGDLKNSATIVKYNNAKGIFQKIIPFRVEPKVGLIVEIAAVV

Specific function: Unknown

COG id: COG2874

COG function: function code NU; Predicted ATPases involved in biogenesis of archaeal flagella

Gene ontology:

Cell location: Archaeal flagellum (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.voltae flaH [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014774 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 26136; Mature: 26136

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEELLKIELKGDELHRRLGGGIPAGTIMLVEGDRGSGKSIFVQRLLYGFLMNGYTASYI
CCCHHEEEEECCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHH
SSQYTTVEYIKQMESLGYGIIPFLIRKKLMFVSLYPLLTGVSEKRKFFSRLFGEPRLWEP
HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC
DIMIIDSFSSLFSREQDPSAVRDFLLYVKKMASLGKVIILTANTEEVDRDSLFVLEEAST
CEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCE
MLIRLSVKVFGGDLKNSATIVKYNNAKGIFQKIIPFRVEPKVGLIVEIAAVV
EEEEEEEEEECCCCCCCEEEEEECCCHHHHHHHCCEEECCCCCCEEEEEECC
>Mature Secondary Structure
MVEELLKIELKGDELHRRLGGGIPAGTIMLVEGDRGSGKSIFVQRLLYGFLMNGYTASYI
CCCHHEEEEECCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHH
SSQYTTVEYIKQMESLGYGIIPFLIRKKLMFVSLYPLLTGVSEKRKFFSRLFGEPRLWEP
HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC
DIMIIDSFSSLFSREQDPSAVRDFLLYVKKMASLGKVIILTANTEEVDRDSLFVLEEAST
CEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCE
MLIRLSVKVFGGDLKNSATIVKYNNAKGIFQKIIPFRVEPKVGLIVEIAAVV
EEEEEEEEEECCCCCCCEEEEEECCCHHHHHHHCCEEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]