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The map label for this gene is flaJ [H]

Identifier: 212224327

GI number: 212224327

Start: 1075349

End: 1077079

Strand: Reverse

Name: flaJ [H]

Synonym: TON_1178

Alternate gene names: 212224327

Gene position: 1077079-1075349 (Counterclockwise)

Preceding gene: 212224328

Following gene: 212224326

Centisome position: 58.3

GC content: 51.42

Gene sequence:

>1731_bases
ATGAGTGACGGGAAGATCAGCATCTTCACTAAGGCAGACCTTGACATGGGGACATACCTAAGGAAAGTGCTCCTACCCTA
CATGGCCATCTCGGCAGCCATTTTTCTCGCCGTTGGAGTTATAACGACCTTCCTCTACATGCCCACTGCCCTTAAGGTTC
TCATGTTCCTAATACCAGTTGTCCTCCTCGTTTACGCTGCTGCTTATCCTTACATCGTGGCCGATTCAAAGAGGATATCA
ATAAACTCAAAAATGCCGTACTTCATCACCTACTTCGCGGTTCTATCTACGAGCGAGATGGGCCGTGCCGACCTCATCGC
GGTACTCTCCCACGACCCCAAGCTCGGCGCCATAGCGGACGAGCTGAAAAAGGTTCACACAATAGTCAACAGGCTCCACC
TCTCTATGCCTGAAGCCTTCCGTTTCCTTGCGAGGAGAACTCCGAGCACGATGTTCGCTGACTTCCTTGACAGGCTAGCC
TATTCCCTTGACAGTGGTGTTGACTTGAAAGATTACCTCTTTCAGGAGCAGCAGACGGTTATGGACGACTATCAAACCTT
TTATGAGGGCGCGCTTTACGACCTTGACATCTTTAAGGAGATATATGAATCCATAATCATCTCGGTTGTGTTTATAGCCT
CTTTTGTCATCATCGGCCCGATAATCACCGGCATGGATATTGCTACCATGGGACTCTACGCGGTCACGATGATCCTTGCG
GCTGAGGTCGGTATACTCCTCGTCGTTAAGTTCAGAATGCCTGAAGACCCAATATGGGCAGACCGCAGAGGAATAGAAGA
CCCGCGCCGGAAGAGGATAAAAATGGCGGCGATTTATTCTGTTTTCGGCAGTATCATTGTGGCTCTTCTTTACTTGGCGG
TTCTAAGGCCGCGCTACTCGATTCCTGAACCCTTCATCCTCGCTGGAGTGTTAACTCCGTTTTTCTACCTGGGCCACGTC
GTCAATAGGGAAGAAGGGTCAATATTCAGGAAAGATGAGAACTTCCCAGCCTTTATTAGGAGCATGGGTTCATCCCTCGC
TGCAAGCGGTGCTTCCCTTGTCCTCGTCCTTAAGTACCTCAGCGCCCACGACTTTGGTTCCCTTACACAGGATATCCGGG
CTCTCTACAGACGCCTTGCCGTCCGCGTGGACAGGGACAGAGCATGGGACTTCTTCATAGCGGGGACCGGAAGCTGGCTC
ATCGGAATTTTCTCCGAGATATTCCGTGAGAGCCTCCGGATGGGTGCCGAGCCCGACTACGTTGGTCTGATCATAAGCAG
GAACTTTGAGAGGCTCGTTCGTCTAAGGAGAAAGAGGCAGCAGAGCATAGCGAGCTTTGTAGGTATAATCTACGGTCTCA
CAGGCGCCTTTGCCTTCGCACTGGCGGCCTCCTTTCAGGTGGCGGTCTCGATAAGCCAGATGTTTTCTCAGATGGAGGTA
CCAACGGAGTACATAGGCGATATAATCCATGTCATCTCACCTTCAGGAATGAGGTTCCTCGTGTACTTGATGCTCGTTAT
GATGGTGCTCCACTCTCTCCTCTCGGGCTTGGTCATTAAGCTGGCCGACGGGGGTCACATCCTCGGTACTGTGAGGTACT
TTGTAATACTTTCATGGATATTTGCCGTGGGAATGTACCTCGGCCAGACCCTTATGGCGAGGATGATGGGGATAAGCTCT
GGTGGGGAAACTGCCCAGATCGCCTTTCACCTCTTGGGGGTGATACCGTGA

Upstream 100 bases:

>100_bases
CTGGGTATAACAAACTACTGGGACGTCTACAGGGAGATCAAGGCATTCTACCAGCGCGGTATTGAGGGACTGAGCTTTAG
AATCTGACGAGGTGAGGGTT

Downstream 100 bases:

>100_bases
GGAAGTTTATGGCTATTGCTGCGGTGATGATCCTCCTTTTTCCACTGATAGGGAGAGTAGGTGCTTCCTCCTTCACAGGC
TGGATGAGTGTTCCCGGTGT

Product: flagellar assembly protein J

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 575

Protein sequence:

>576_residues
MSDGKISIFTKADLDMGTYLRKVLLPYMAISAAIFLAVGVITTFLYMPTALKVLMFLIPVVLLVYAAAYPYIVADSKRIS
INSKMPYFITYFAVLSTSEMGRADLIAVLSHDPKLGAIADELKKVHTIVNRLHLSMPEAFRFLARRTPSTMFADFLDRLA
YSLDSGVDLKDYLFQEQQTVMDDYQTFYEGALYDLDIFKEIYESIIISVVFIASFVIIGPIITGMDIATMGLYAVTMILA
AEVGILLVVKFRMPEDPIWADRRGIEDPRRKRIKMAAIYSVFGSIIVALLYLAVLRPRYSIPEPFILAGVLTPFFYLGHV
VNREEGSIFRKDENFPAFIRSMGSSLAASGASLVLVLKYLSAHDFGSLTQDIRALYRRLAVRVDRDRAWDFFIAGTGSWL
IGIFSEIFRESLRMGAEPDYVGLIISRNFERLVRLRRKRQQSIASFVGIIYGLTGAFAFALAASFQVAVSISQMFSQMEV
PTEYIGDIIHVISPSGMRFLVYLMLVMMVLHSLLSGLVIKLADGGHILGTVRYFVILSWIFAVGMYLGQTLMARMMGISS
GGETAQIAFHLLGVIP

Sequences:

>Translated_576_residues
MSDGKISIFTKADLDMGTYLRKVLLPYMAISAAIFLAVGVITTFLYMPTALKVLMFLIPVVLLVYAAAYPYIVADSKRIS
INSKMPYFITYFAVLSTSEMGRADLIAVLSHDPKLGAIADELKKVHTIVNRLHLSMPEAFRFLARRTPSTMFADFLDRLA
YSLDSGVDLKDYLFQEQQTVMDDYQTFYEGALYDLDIFKEIYESIIISVVFIASFVIIGPIITGMDIATMGLYAVTMILA
AEVGILLVVKFRMPEDPIWADRRGIEDPRRKRIKMAAIYSVFGSIIVALLYLAVLRPRYSIPEPFILAGVLTPFFYLGHV
VNREEGSIFRKDENFPAFIRSMGSSLAASGASLVLVLKYLSAHDFGSLTQDIRALYRRLAVRVDRDRAWDFFIAGTGSWL
IGIFSEIFRESLRMGAEPDYVGLIISRNFERLVRLRRKRQQSIASFVGIIYGLTGAFAFALAASFQVAVSISQMFSQMEV
PTEYIGDIIHVISPSGMRFLVYLMLVMMVLHSLLSGLVIKLADGGHILGTVRYFVILSWIFAVGMYLGQTLMARMMGISS
GGETAQIAFHLLGVIP
>Mature_575_residues
SDGKISIFTKADLDMGTYLRKVLLPYMAISAAIFLAVGVITTFLYMPTALKVLMFLIPVVLLVYAAAYPYIVADSKRISI
NSKMPYFITYFAVLSTSEMGRADLIAVLSHDPKLGAIADELKKVHTIVNRLHLSMPEAFRFLARRTPSTMFADFLDRLAY
SLDSGVDLKDYLFQEQQTVMDDYQTFYEGALYDLDIFKEIYESIIISVVFIASFVIIGPIITGMDIATMGLYAVTMILAA
EVGILLVVKFRMPEDPIWADRRGIEDPRRKRIKMAAIYSVFGSIIVALLYLAVLRPRYSIPEPFILAGVLTPFFYLGHVV
NREEGSIFRKDENFPAFIRSMGSSLAASGASLVLVLKYLSAHDFGSLTQDIRALYRRLAVRVDRDRAWDFFIAGTGSWLI
GIFSEIFRESLRMGAEPDYVGLIISRNFERLVRLRRKRQQSIASFVGIIYGLTGAFAFALAASFQVAVSISQMFSQMEVP
TEYIGDIIHVISPSGMRFLVYLMLVMMVLHSLLSGLVIKLADGGHILGTVRYFVILSWIFAVGMYLGQTLMARMMGISSG
GETAQIAFHLLGVIP

Specific function: Unknown

COG id: COG1955

COG function: function code NU; Archaeal flagella assembly protein J

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Archaeal flagellum (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii flaJ [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018076 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 64406; Mature: 64275

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDGKISIFTKADLDMGTYLRKVLLPYMAISAAIFLAVGVITTFLYMPTALKVLMFLIPV
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLVYAAAYPYIVADSKRISINSKMPYFITYFAVLSTSEMGRADLIAVLSHDPKLGAIAD
HHHHHHHHCCEEEECCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHH
ELKKVHTIVNRLHLSMPEAFRFLARRTPSTMFADFLDRLAYSLDSGVDLKDYLFQEQQTV
HHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
MDDYQTFYEGALYDLDIFKEIYESIIISVVFIASFVIIGPIITGMDIATMGLYAVTMILA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
AEVGILLVVKFRMPEDPIWADRRGIEDPRRKRIKMAAIYSVFGSIIVALLYLAVLRPRYS
HHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IPEPFILAGVLTPFFYLGHVVNREEGSIFRKDENFPAFIRSMGSSLAASGASLVLVLKYL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
SAHDFGSLTQDIRALYRRLAVRVDRDRAWDFFIAGTGSWLIGIFSEIFRESLRMGAEPDY
HCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCE
VGLIISRNFERLVRLRRKRQQSIASFVGIIYGLTGAFAFALAASFQVAVSISQMFSQMEV
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PTEYIGDIIHVISPSGMRFLVYLMLVMMVLHSLLSGLVIKLADGGHILGTVRYFVILSWI
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHH
FAVGMYLGQTLMARMMGISSGGETAQIAFHLLGVIP
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SDGKISIFTKADLDMGTYLRKVLLPYMAISAAIFLAVGVITTFLYMPTALKVLMFLIPV
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLVYAAAYPYIVADSKRISINSKMPYFITYFAVLSTSEMGRADLIAVLSHDPKLGAIAD
HHHHHHHHCCEEEECCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHH
ELKKVHTIVNRLHLSMPEAFRFLARRTPSTMFADFLDRLAYSLDSGVDLKDYLFQEQQTV
HHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
MDDYQTFYEGALYDLDIFKEIYESIIISVVFIASFVIIGPIITGMDIATMGLYAVTMILA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
AEVGILLVVKFRMPEDPIWADRRGIEDPRRKRIKMAAIYSVFGSIIVALLYLAVLRPRYS
HHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IPEPFILAGVLTPFFYLGHVVNREEGSIFRKDENFPAFIRSMGSSLAASGASLVLVLKYL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
SAHDFGSLTQDIRALYRRLAVRVDRDRAWDFFIAGTGSWLIGIFSEIFRESLRMGAEPDY
HCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCE
VGLIISRNFERLVRLRRKRQQSIASFVGIIYGLTGAFAFALAASFQVAVSISQMFSQMEV
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PTEYIGDIIHVISPSGMRFLVYLMLVMMVLHSLLSGLVIKLADGGHILGTVRYFVILSWI
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHH
FAVGMYLGQTLMARMMGISSGGETAQIAFHLLGVIP
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA