Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224237

Identifier: 212224237

GI number: 212224237

Start: 1009103

End: 1009522

Strand: Reverse

Name: 212224237

Synonym: TON_1088

Alternate gene names: NA

Gene position: 1009522-1009103 (Counterclockwise)

Preceding gene: 212224239

Following gene: 212224229

Centisome position: 54.64

GC content: 50.24

Gene sequence:

>420_bases
ATGCCAGTGCTTGGATTCAACATAACCAAGGTCGAGATGGAGAAGAAGGCCATTGGCGTTCCCGGTGGCCAGATTGAGGT
CAGGCTCTCGCCGAAGATTAAGGAAATGCGCCTCGGTGAGATACGCACTCCGACCGGAAAGATGAACGGTATTGAGGTTC
TCTTCAGGTATGAGATTGACTACAACCCCAAGGTCGCTCAGGGTGTAATCGAGGGAATTATTCTGTACGTTCCGCCTCAG
AAGGACAAGATGGACGAGATACTCAACCTGTGGGAAGATGAAAAGAAGATGGATCCAGTAACCTTTGCCGAGATTGTGAA
CTTCATAACCAAGGAAGTCTCCCCTATGATAATGCTCCTCGCGAAGGAAATGCGCCTGCCCTACCACATACCGCTTCCAA
GGGTAGAGGTCAAGTCCTGA

Upstream 100 bases:

>100_bases
CTACTTTTTCCCTCGGCATCGAACTAGGCTCGACCGGAACGTTTAAAGGCCTACCGATAGCGTTTTATATAGTCGAAACC
ACTTTGGGGTGGTGAAAAAA

Downstream 100 bases:

>100_bases
CCTTTCTTTTCTTAATGATATATTCCTTCTGCCTCGTAGAGCATGTTTGCGACCTCTTTGAGCTCATCCTTTCTAAGGAG
TACTTTTTCGGCCAGCTCGA

Product: protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MPVLGFNITKVEMEKKAIGVPGGQIEVRLSPKIKEMRLGEIRTPTGKMNGIEVLFRYEIDYNPKVAQGVIEGIILYVPPQ
KDKMDEILNLWEDEKKMDPVTFAEIVNFITKEVSPMIMLLAKEMRLPYHIPLPRVEVKS

Sequences:

>Translated_139_residues
MPVLGFNITKVEMEKKAIGVPGGQIEVRLSPKIKEMRLGEIRTPTGKMNGIEVLFRYEIDYNPKVAQGVIEGIILYVPPQ
KDKMDEILNLWEDEKKMDPVTFAEIVNFITKEVSPMIMLLAKEMRLPYHIPLPRVEVKS
>Mature_138_residues
PVLGFNITKVEMEKKAIGVPGGQIEVRLSPKIKEMRLGEIRTPTGKMNGIEVLFRYEIDYNPKVAQGVIEGIILYVPPQK
DKMDEILNLWEDEKKMDPVTFAEIVNFITKEVSPMIMLLAKEMRLPYHIPLPRVEVKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15923; Mature: 15792

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLGFNITKVEMEKKAIGVPGGQIEVRLSPKIKEMRLGEIRTPTGKMNGIEVLFRYEID
CCCCCCCEEEEEECHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
YNPKVAQGVIEGIILYVPPQKDKMDEILNLWEDEKKMDPVTFAEIVNFITKEVSPMIMLL
CCCHHHHHHHCCEEEEECCCCCHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHH
AKEMRLPYHIPLPRVEVKS
HHHHCCCEECCCCCEEECC
>Mature Secondary Structure 
PVLGFNITKVEMEKKAIGVPGGQIEVRLSPKIKEMRLGEIRTPTGKMNGIEVLFRYEID
CCCCCCEEEEEECHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
YNPKVAQGVIEGIILYVPPQKDKMDEILNLWEDEKKMDPVTFAEIVNFITKEVSPMIMLL
CCCHHHHHHHCCEEEEECCCCCHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHH
AKEMRLPYHIPLPRVEVKS
HHHHCCCEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA