Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224229

Identifier: 212224229

GI number: 212224229

Start: 999396

End: 1001204

Strand: Reverse

Name: 212224229

Synonym: TON_1080

Alternate gene names: NA

Gene position: 1001204-999396 (Counterclockwise)

Preceding gene: 212224237

Following gene: 212224228

Centisome position: 54.19

GC content: 53.18

Gene sequence:

>1809_bases
ATGAGAGTGTTCGTTGCTGATACGAGTGTTATAGTAGATGGCCGCCTTACGCAGTTCCTATCAACGCTTGAAGACAAAGT
TAAGGTTGTTATCCCTGAGGCAGTCATTGCTGAGATAGAGCATCAGGCCAACGAGGGAAAGGCTATCGGTCATGTGGGAC
TTGAGGAGCTCAAAAAGCTCCGTGAGATGTCCGACAGGGGGAAGATACTCCTCGAGTTCTACGGCGAGCGGCCCGAGCTC
TGGCAGATAAGTAGAGCGAAGGCTGGAGAAATAGACCACATGGTTAGGGAGGTTGCCCAGACGCTGAGCGCCACGCTCAT
AACTGGTGACCAGGTGCAGAGGGACATAGCCATCGCCAAGGGTATAGACGTGATTTACCTGACGGCCAAGAAAGAAGTCA
GGCACCGCTTGGAGGACTTCTTTGACGAGACGACGATGAGTGTTCACCTGAAAGCTGGCTTAAGGCCCATGGCAAAGAAG
GGAAGACCGGGAGAGTGGAAGCTCGTTCCCGTTCGTGACGAGATTCTGACCGATGAAGAGCTTGAAGAGATTGCCGATGA
CATAGTCGAGCGCGCGAGACGTGACCCAGAATCCTTTATAGAACTCGACGAGCCTGGAGCGACCGTCGTCCAGCTCAGGA
ACTACCGTATAGTCATAGCCAAGCCGCCCTTTGCAGACAGGATTGAGATAACTGCCGTTAGACCAGTCACGAAACTAAGT
ATAGAAGACTACGATCTGAGCGAGAAGCTCCTGGAGAGGCTCGTGGATAAGGCGGAGGGAATACTCATCGCAGGTGCACC
TGGAGAAGGAAAGACGACCTTCGCACAGGCTTTGGCCGAGTGGTACGCCTCCATGGGCAAGATAGTGAAAACGATGGAGA
AGCCAAGGGACCTGCAGGTGAGCGACGAGATAACCCAGTACACAGCTCTGGCCGGTAGAATGGAAAAGACGGGGGACATA
CTCCTCCTCGTCAGGCCGGATTACACAATATTCGACGAGATGAGAAAGACCAGCGACTTCAAAATATACGCTGATCTGAG
ACTTGCAGGCGTCGGAATGGTTGGTGTCGTGCATGCTACCAAGCCCATCGATGCGATCCAGAGGTTCATCGGAAGGGTCG
AGCTGGGAATGATACCCCAGATAGTCGATACTGTGATTTTCATCAAGGCAGGAAGGATCGCCAAGGTTCTAACGCTGGAG
TACCTCGTTAAGGTGCCAAGCGGCATGAAAGAAGAGGACTTGGCCAGGCCTGTCATCGAGGTTCGCGACTTTGAGACAGG
CGAGCTTGAGTACGAGATATACACCTACGGCGAGGAGATAAGCGTTGTCCCGGTAAAGAAGGAGGAGAAATCACCGGCGC
TGAGACTTGCAGAGAAGAGGCTCAAGCAGGAGATAAAGAAGTTCCTGCCCGATGTTTACGCTGAGGTTGAGATAGTCAGC
CCGCACAAGGCGGTTATTTATGCCGACGAGTTCGACATTCCTGCAATCATAGGCAAGAAGGGCAAGCGTATCACCGAGCT
TGAGAAGCGCATAGGAATAAGCATCGACGTCAAGAGCTTCGCCGAGAGGGAAGCGACAAAGCCGAAGGAGAGGATACATG
TCGAGGTCGAGGAGAAAAAGAAAACGATAGTGCTCCGTGTTTCGCCGGACTATGCCAAGAGGCCGCTCAAGTTCTACGGA
GGCGAGCAGTACGTCTTTACTGCAACGCCAAGCAAGAAGGGCCTCGTCAAAGTAAGCAAGAGCACGCCGATAGGCAAGGA
ACTCAAGAGGCTCCTCGACGCGGGCATTCCGATATGGGCCTCGGCCTGA

Upstream 100 bases:

>100_bases
TCCTATTTTCGACTAAACCTTTATGAACCTTTAGTCAGAGCATCGGTTAGGGAAGTCTTATAAACGGATGAGAGTTTCCG
GGACTTCTGAGGTGAGAGAA

Downstream 100 bases:

>100_bases
AAAAACTTTTTATGATTGATTTTTTATTTCTTTTAGTGGTACTAACCACGGAGGAATGTTTTATGGTATGGAGAGACAAG
GTGTTCTGGGGTCTGGCTGG

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MRVFVADTSVIVDGRLTQFLSTLEDKVKVVIPEAVIAEIEHQANEGKAIGHVGLEELKKLREMSDRGKILLEFYGERPEL
WQISRAKAGEIDHMVREVAQTLSATLITGDQVQRDIAIAKGIDVIYLTAKKEVRHRLEDFFDETTMSVHLKAGLRPMAKK
GRPGEWKLVPVRDEILTDEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFADRIEITAVRPVTKLS
IEDYDLSEKLLERLVDKAEGILIAGAPGEGKTTFAQALAEWYASMGKIVKTMEKPRDLQVSDEITQYTALAGRMEKTGDI
LLLVRPDYTIFDEMRKTSDFKIYADLRLAGVGMVGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKAGRIAKVLTLE
YLVKVPSGMKEEDLARPVIEVRDFETGELEYEIYTYGEEISVVPVKKEEKSPALRLAEKRLKQEIKKFLPDVYAEVEIVS
PHKAVIYADEFDIPAIIGKKGKRITELEKRIGISIDVKSFAEREATKPKERIHVEVEEKKKTIVLRVSPDYAKRPLKFYG
GEQYVFTATPSKKGLVKVSKSTPIGKELKRLLDAGIPIWASA

Sequences:

>Translated_602_residues
MRVFVADTSVIVDGRLTQFLSTLEDKVKVVIPEAVIAEIEHQANEGKAIGHVGLEELKKLREMSDRGKILLEFYGERPEL
WQISRAKAGEIDHMVREVAQTLSATLITGDQVQRDIAIAKGIDVIYLTAKKEVRHRLEDFFDETTMSVHLKAGLRPMAKK
GRPGEWKLVPVRDEILTDEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFADRIEITAVRPVTKLS
IEDYDLSEKLLERLVDKAEGILIAGAPGEGKTTFAQALAEWYASMGKIVKTMEKPRDLQVSDEITQYTALAGRMEKTGDI
LLLVRPDYTIFDEMRKTSDFKIYADLRLAGVGMVGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKAGRIAKVLTLE
YLVKVPSGMKEEDLARPVIEVRDFETGELEYEIYTYGEEISVVPVKKEEKSPALRLAEKRLKQEIKKFLPDVYAEVEIVS
PHKAVIYADEFDIPAIIGKKGKRITELEKRIGISIDVKSFAEREATKPKERIHVEVEEKKKTIVLRVSPDYAKRPLKFYG
GEQYVFTATPSKKGLVKVSKSTPIGKELKRLLDAGIPIWASA
>Mature_602_residues
MRVFVADTSVIVDGRLTQFLSTLEDKVKVVIPEAVIAEIEHQANEGKAIGHVGLEELKKLREMSDRGKILLEFYGERPEL
WQISRAKAGEIDHMVREVAQTLSATLITGDQVQRDIAIAKGIDVIYLTAKKEVRHRLEDFFDETTMSVHLKAGLRPMAKK
GRPGEWKLVPVRDEILTDEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFADRIEITAVRPVTKLS
IEDYDLSEKLLERLVDKAEGILIAGAPGEGKTTFAQALAEWYASMGKIVKTMEKPRDLQVSDEITQYTALAGRMEKTGDI
LLLVRPDYTIFDEMRKTSDFKIYADLRLAGVGMVGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKAGRIAKVLTLE
YLVKVPSGMKEEDLARPVIEVRDFETGELEYEIYTYGEEISVVPVKKEEKSPALRLAEKRLKQEIKKFLPDVYAEVEIVS
PHKAVIYADEFDIPAIIGKKGKRITELEKRIGISIDVKSFAEREATKPKERIHVEVEEKKKTIVLRVSPDYAKRPLKFYG
GEQYVFTATPSKKGLVKVSKSTPIGKELKRLLDAGIPIWASA

Specific function: Unknown

COG id: COG1855

COG function: function code R; ATPase (PilT family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004087
- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E; PF00013 KH_1; PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 67856; Mature: 67856

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVFVADTSVIVDGRLTQFLSTLEDKVKVVIPEAVIAEIEHQANEGKAIGHVGLEELKKL
CEEEEECCEEEECHHHHHHHHHHHHHHEEEECHHHHHHHHHCCCCCCEEECCCHHHHHHH
REMSDRGKILLEFYGERPELWQISRAKAGEIDHMVREVAQTLSATLITGDQVQRDIAIAK
HHHHCCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHEEEECHHHHHHHHHHC
GIDVIYLTAKKEVRHRLEDFFDETTMSVHLKAGLRPMAKKGRPGEWKLVPVRDEILTDEE
CCCEEEEECHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCEEEEECHHHHCCHHH
LEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFADRIEITAVRPVTKLS
HHHHHHHHHHHHHCCCHHHEEECCCCCEEEEEECEEEEEECCCCCCCEEEEEECCEEEEE
IEDYDLSEKLLERLVDKAEGILIAGAPGEGKTTFAQALAEWYASMGKIVKTMEKPRDLQV
CCCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SDEITQYTALAGRMEKTGDILLLVRPDYTIFDEMRKTSDFKIYADLRLAGVGMVGVVHAT
HHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCCCEEEEEEEEEECCCEEEEEECC
KPIDAIQRFIGRVELGMIPQIVDTVIFIKAGRIAKVLTLEYLVKVPSGMKEEDLARPVIE
CCHHHHHHHHHHHHHCCHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCHHHHHCCHHH
VRDFETGELEYEIYTYGEEISVVPVKKEEKSPALRLAEKRLKQEIKKFLPDVYAEVEIVS
HCCCCCCCEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHCEEEEEC
PHKAVIYADEFDIPAIIGKKGKRITELEKRIGISIDVKSFAEREATKPKERIHVEVEEKK
CCEEEEEECCCCCCHHCCCCCCHHHHHHHHCCCEEEHHHHHHHHCCCCHHHEEEEEECCC
KTIVLRVSPDYAKRPLKFYGGEQYVFTATPSKKGLVKVSKSTPIGKELKRLLDAGIPIWA
CEEEEEECCHHHHCCHHHCCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHCCCCEEE
SA
CC
>Mature Secondary Structure
MRVFVADTSVIVDGRLTQFLSTLEDKVKVVIPEAVIAEIEHQANEGKAIGHVGLEELKKL
CEEEEECCEEEECHHHHHHHHHHHHHHEEEECHHHHHHHHHCCCCCCEEECCCHHHHHHH
REMSDRGKILLEFYGERPELWQISRAKAGEIDHMVREVAQTLSATLITGDQVQRDIAIAK
HHHHCCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHEEEECHHHHHHHHHHC
GIDVIYLTAKKEVRHRLEDFFDETTMSVHLKAGLRPMAKKGRPGEWKLVPVRDEILTDEE
CCCEEEEECHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCEEEEECHHHHCCHHH
LEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFADRIEITAVRPVTKLS
HHHHHHHHHHHHHCCCHHHEEECCCCCEEEEEECEEEEEECCCCCCCEEEEEECCEEEEE
IEDYDLSEKLLERLVDKAEGILIAGAPGEGKTTFAQALAEWYASMGKIVKTMEKPRDLQV
CCCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SDEITQYTALAGRMEKTGDILLLVRPDYTIFDEMRKTSDFKIYADLRLAGVGMVGVVHAT
HHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCCCEEEEEEEEEECCCEEEEEECC
KPIDAIQRFIGRVELGMIPQIVDTVIFIKAGRIAKVLTLEYLVKVPSGMKEEDLARPVIE
CCHHHHHHHHHHHHHCCHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCHHHHHCCHHH
VRDFETGELEYEIYTYGEEISVVPVKKEEKSPALRLAEKRLKQEIKKFLPDVYAEVEIVS
HCCCCCCCEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHCEEEEEC
PHKAVIYADEFDIPAIIGKKGKRITELEKRIGISIDVKSFAEREATKPKERIHVEVEEKK
CCEEEEEECCCCCCHHCCCCCCHHHHHHHHCCCEEEHHHHHHHHCCCCHHHEEEEEECCC
KTIVLRVSPDYAKRPLKFYGGEQYVFTATPSKKGLVKVSKSTPIGKELKRLLDAGIPIWA
CEEEEEECCHHHHCCHHHCCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHCCCCEEE
SA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]