| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is glgP [H]
Identifier: 212223337
GI number: 212223337
Start: 167384
End: 169885
Strand: Reverse
Name: glgP [H]
Synonym: TON_0191
Alternate gene names: 212223337
Gene position: 169885-167384 (Counterclockwise)
Preceding gene: 212223338
Following gene: 212223336
Centisome position: 9.19
GC content: 53.48
Gene sequence:
>2502_bases ATGGCCGACGTTGAAACTCCCACCCACGATTTAATCAGGGAGAAGCTTCCCCATCCCATCAAGGATTTGGCTGATCTGGC CTACAACTACTGGTGGAGCTGGAACAGGAGGGCAACGAGGCTCTGGGAGTATATTGACCCGGTACACTGGAGGGAACACA AGAATCCGGTTAAGCTCCTTCTCGACGTTTCCGAGGAGCGCCTCGAGGAGCTTCTGAAGGACGACGACTTCATGAACCTC TACGAGCTCGTTATGGAACAATTCCGGGATTATATGAATCCAGATTCGACCTGGTTCTCAACCAACTACCCCAAGTGGGA CAAGCCCATAGTGTATCTCTGCATGGAGTACGGCATAAGCAGGACTCTGCCCATATACTCTGGTGGTCTGGGGATACTCG CTGGTGACCACGTGAAGACCGCCAGTGACCTTGGCCTGCCTTTCATAGCAATAGGTCTGCTCTATAAGCACGGCTACTTC AAGCAGGAGATAGACAGAGACGGAAGACAGATCGAGATCTTCCCAGAGTACAGGCCAGAGGAGATGCCGATAAAACCGGT TCTCGGGAAGGATGGAAAGCCACTCCTTATAGAGGTCCCCATAGAGGACAGAATCGTTTACGCGAGGGCCTCGGAGGTTG AGGTTGGAAGGGTGAAGATATATCTACTGGACACCGACGTTCCCGAGAACAGCGCGGACGACAGAACCATATGCGACTAC CTCTACAATGCCGAGATAGACAAGCGCATAAAGCAGGAGATACTTCTAGGAATCGGTGGAATGCGCCTGCTTAAAGCTTT GGGCATTGAACCCGGCGTTGTCCACCTCAACGAGGGGCATCCAGCCTTTGCTAACCTTCAGAGGATAGCCTGGTACATGG ATGAAGGGTTGACCTTTACCGAGGCGTTGAGTATTGTCAGAGGGACTACGGTTTTCACCACGCACACCCCAGTTCCAGCG GGCCACGATCGCTTCCCAATTGAGGAGGTCAGGAAGAGGCTCGCCAAGTTCCTTGAGGATAAGGACGAGAGACTCCTGGA GCTCGGCCGTGAGAGGGATGAAATCAACATGACCTTACTGGCCATAAGAACTTCCAGCTACGTCAACGGCGTCAGTAAGC TCCATGCCGAGGTAAGCAAGCGCATGTGGCAGAATCTTTGGCCCGGAGTTCCGCTGGATGAGATACCCATCGAGGGCATC ACCAACGGCGTACACACCATGACCTGGGTTCACAGCGAGATGAGAAAGCTCTTTGACCGCTATCTCGGAAAGGCATGGCG CGAGCACACGAACATCGAGGGTCTGTGGTACGCCATTGAGAGGATTCCCGATGAAGAGCTCTGGGAGGCCCATCTTAAGG CCAAGAGGGAGTTCATAGAGCTACTGAAGAGGAAGATTAGGGCGAGGAACGAGAGGCTTGGAATAGATGATCCCCTGCCA GAGATAGACGAGAACGCGCTCATCATAGGCTTTGCCCGGCGCTTCGCGACCTACAAGCGCGCCACCCTACTCTTTACGGA TATTGAAAGGCTCAAGAGACTTCTGAACAACCCAGAGAGGCCAGTCTACATAGTCTTTGGTGGAAAGGCCCATCCAATGG ACGAGGCCGGCAAAGAGTTCCTAAAGAAAGTCTACGAGGCCTCTCAGATGCCCGAGTTCAGGGGCAAGATATTCGTCCTT GAGAACTACGATATGGGAAGTGCAAGGCTCATGGTGGCCGGAGTTGACCTCTGGCTCAACAATCCGCGCAGGCCGATGGA AGCTAGCGGAACGAGTGGAATGAAAGCCGGGCTGAACGGAGTGCTCAACGCGAGCATCTACGAGGGCTGGTGGGTGGAAG GCTACAACGGCAGGAACGGGTGGATCATTGGAGAGGAGAGTACGGAGCCCGAGACCGAAGCCGACGACATAAAGGACGCA GAGAGCCTCTACAATCTGCTGGAGAGGGAAATAATCCCAACCTACTACGGCAACCGCGGGAAATGGATTTACATGATGAA GGAGAGCATCAAGAGCATAGCCCCGCGCTTCAGCACTCACAGGATGGTCAAGGAATACATGGATCGTTTCTATTCCAAGG CTATGAGTAACTACATCTGGCTCACGAGGGGTAACTACGCCGGTGCCAAGGAGATGGCCGCATGGAAAGACCGCGTTATC AGTGCATGGAACAACGTGAGCATCGAAAGTGTAGCCATAAAAGATGGAAGCAGACTTGAGATCCTCGTCTACCTCGATGA ACTTAAGCCCGAAGACGTCCGTCTTGAGCTCTACTACGGCGTCCATGCCGAGGAGCAACGCATAGAGAAACCGCATATCG TTGAGCTGAGGCATCCAAAGGAGCTCGGGGGTGGGAGGTGGCTCTACACCTATGAGGGAAGTGCTCTGAGGCACCTCGGT AATTCCTGCTGGAACTATGCGATAAGGATTTACCCCCACCACGAAAAGCTACCCCACCGGTTCTTGCTCGGATTGGTGAA GTGGAGAGGTTTCTTTGAGTGA
Upstream 100 bases:
>100_bases TCTTTTCCTTCTCCGGGTGCACTTTTCTGGGTACTCCCAAAACCCTTTTTAACCCCACTCTCCACATAGTATCACCGAAA ATGATACATAGGTGGTCGCC
Downstream 100 bases:
>100_bases GTCTTCCCCATTGTTTCATTTTTGGCAAAATTTACTCCATAAACTAGAAGTAAGAACTTTTAGACGTTCCTCGTGGGAAG TCATATTTTTAACCTCAAAC
Product: maltodextrin phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 833; Mature: 832
Protein sequence:
>833_residues MADVETPTHDLIREKLPHPIKDLADLAYNYWWSWNRRATRLWEYIDPVHWREHKNPVKLLLDVSEERLEELLKDDDFMNL YELVMEQFRDYMNPDSTWFSTNYPKWDKPIVYLCMEYGISRTLPIYSGGLGILAGDHVKTASDLGLPFIAIGLLYKHGYF KQEIDRDGRQIEIFPEYRPEEMPIKPVLGKDGKPLLIEVPIEDRIVYARASEVEVGRVKIYLLDTDVPENSADDRTICDY LYNAEIDKRIKQEILLGIGGMRLLKALGIEPGVVHLNEGHPAFANLQRIAWYMDEGLTFTEALSIVRGTTVFTTHTPVPA GHDRFPIEEVRKRLAKFLEDKDERLLELGRERDEINMTLLAIRTSSYVNGVSKLHAEVSKRMWQNLWPGVPLDEIPIEGI TNGVHTMTWVHSEMRKLFDRYLGKAWREHTNIEGLWYAIERIPDEELWEAHLKAKREFIELLKRKIRARNERLGIDDPLP EIDENALIIGFARRFATYKRATLLFTDIERLKRLLNNPERPVYIVFGGKAHPMDEAGKEFLKKVYEASQMPEFRGKIFVL ENYDMGSARLMVAGVDLWLNNPRRPMEASGTSGMKAGLNGVLNASIYEGWWVEGYNGRNGWIIGEESTEPETEADDIKDA ESLYNLLEREIIPTYYGNRGKWIYMMKESIKSIAPRFSTHRMVKEYMDRFYSKAMSNYIWLTRGNYAGAKEMAAWKDRVI SAWNNVSIESVAIKDGSRLEILVYLDELKPEDVRLELYYGVHAEEQRIEKPHIVELRHPKELGGGRWLYTYEGSALRHLG NSCWNYAIRIYPHHEKLPHRFLLGLVKWRGFFE
Sequences:
>Translated_833_residues MADVETPTHDLIREKLPHPIKDLADLAYNYWWSWNRRATRLWEYIDPVHWREHKNPVKLLLDVSEERLEELLKDDDFMNL YELVMEQFRDYMNPDSTWFSTNYPKWDKPIVYLCMEYGISRTLPIYSGGLGILAGDHVKTASDLGLPFIAIGLLYKHGYF KQEIDRDGRQIEIFPEYRPEEMPIKPVLGKDGKPLLIEVPIEDRIVYARASEVEVGRVKIYLLDTDVPENSADDRTICDY LYNAEIDKRIKQEILLGIGGMRLLKALGIEPGVVHLNEGHPAFANLQRIAWYMDEGLTFTEALSIVRGTTVFTTHTPVPA GHDRFPIEEVRKRLAKFLEDKDERLLELGRERDEINMTLLAIRTSSYVNGVSKLHAEVSKRMWQNLWPGVPLDEIPIEGI TNGVHTMTWVHSEMRKLFDRYLGKAWREHTNIEGLWYAIERIPDEELWEAHLKAKREFIELLKRKIRARNERLGIDDPLP EIDENALIIGFARRFATYKRATLLFTDIERLKRLLNNPERPVYIVFGGKAHPMDEAGKEFLKKVYEASQMPEFRGKIFVL ENYDMGSARLMVAGVDLWLNNPRRPMEASGTSGMKAGLNGVLNASIYEGWWVEGYNGRNGWIIGEESTEPETEADDIKDA ESLYNLLEREIIPTYYGNRGKWIYMMKESIKSIAPRFSTHRMVKEYMDRFYSKAMSNYIWLTRGNYAGAKEMAAWKDRVI SAWNNVSIESVAIKDGSRLEILVYLDELKPEDVRLELYYGVHAEEQRIEKPHIVELRHPKELGGGRWLYTYEGSALRHLG NSCWNYAIRIYPHHEKLPHRFLLGLVKWRGFFE >Mature_832_residues ADVETPTHDLIREKLPHPIKDLADLAYNYWWSWNRRATRLWEYIDPVHWREHKNPVKLLLDVSEERLEELLKDDDFMNLY ELVMEQFRDYMNPDSTWFSTNYPKWDKPIVYLCMEYGISRTLPIYSGGLGILAGDHVKTASDLGLPFIAIGLLYKHGYFK QEIDRDGRQIEIFPEYRPEEMPIKPVLGKDGKPLLIEVPIEDRIVYARASEVEVGRVKIYLLDTDVPENSADDRTICDYL YNAEIDKRIKQEILLGIGGMRLLKALGIEPGVVHLNEGHPAFANLQRIAWYMDEGLTFTEALSIVRGTTVFTTHTPVPAG HDRFPIEEVRKRLAKFLEDKDERLLELGRERDEINMTLLAIRTSSYVNGVSKLHAEVSKRMWQNLWPGVPLDEIPIEGIT NGVHTMTWVHSEMRKLFDRYLGKAWREHTNIEGLWYAIERIPDEELWEAHLKAKREFIELLKRKIRARNERLGIDDPLPE IDENALIIGFARRFATYKRATLLFTDIERLKRLLNNPERPVYIVFGGKAHPMDEAGKEFLKKVYEASQMPEFRGKIFVLE NYDMGSARLMVAGVDLWLNNPRRPMEASGTSGMKAGLNGVLNASIYEGWWVEGYNGRNGWIIGEESTEPETEADDIKDAE SLYNLLEREIIPTYYGNRGKWIYMMKESIKSIAPRFSTHRMVKEYMDRFYSKAMSNYIWLTRGNYAGAKEMAAWKDRVIS AWNNVSIESVAIKDGSRLEILVYLDELKPEDVRLELYYGVHAEEQRIEKPHIVELRHPKELGGGRWLYTYEGSALRHLGN SCWNYAIRIYPHHEKLPHRFLLGLVKWRGFFE
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=379, Percent_Identity=25.5936675461741, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI71037379, Length=576, Percent_Identity=23.7847222222222, Blast_Score=83, Evalue=8e-16, Organism=Homo sapiens, GI255653002, Length=576, Percent_Identity=23.7847222222222, Blast_Score=83, Evalue=1e-15, Organism=Escherichia coli, GI2367228, Length=404, Percent_Identity=23.2673267326733, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI48994936, Length=382, Percent_Identity=24.6073298429319, Blast_Score=76, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6325418, Length=400, Percent_Identity=26.5, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 97134; Mature: 97002
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00102 PHOSPHORYLASE ; PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVETPTHDLIREKLPHPIKDLADLAYNYWWSWNRRATRLWEYIDPVHWREHKNPVKLL CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHCCCCCEEEE LDVSEERLEELLKDDDFMNLYELVMEQFRDYMNPDSTWFSTNYPKWDKPIVYLCMEYGIS EECCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHCCC RTLPIYSGGLGILAGDHVKTASDLGLPFIAIGLLYKHGYFKQEIDRDGRQIEIFPEYRPE CCCCEEECCEEEEECCCCCCHHHCCCHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCC EMPIKPVLGKDGKPLLIEVPIEDRIVYARASEVEVGRVKIYLLDTDVPENSADDRTICDY CCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEEEEEEEECCCCCCCCCCHHHHHH LYNAEIDKRIKQEILLGIGGMRLLKALGIEPGVVHLNEGHPAFANLQRIAWYMDEGLTFT HHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHH EALSIVRGTTVFTTHTPVPAGHDRFPIEEVRKRLAKFLEDKDERLLELGRERDEINMTLL HHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEE AIRTSSYVNGVSKLHAEVSKRMWQNLWPGVPLDEIPIEGITNGVHTMTWVHSEMRKLFDR EEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH YLGKAWREHTNIEGLWYAIERIPDEELWEAHLKAKREFIELLKRKIRARNERLGIDDPLP HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC EIDENALIIGFARRFATYKRATLLFTDIERLKRLLNNPERPVYIVFGGKAHPMDEAGKEF CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH LKKVYEASQMPEFRGKIFVLENYDMGSARLMVAGVDLWLNNPRRPMEASGTSGMKAGLNG HHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHCCCH VLNASIYEGWWVEGYNGRNGWIIGEESTEPETEADDIKDAESLYNLLEREIIPTYYGNRG HEECCEECCEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCC KWIYMMKESIKSIAPRFSTHRMVKEYMDRFYSKAMSNYIWLTRGNYAGAKEMAAWKDRVI CEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHH SAWNNVSIESVAIKDGSRLEILVYLDELKPEDVRLELYYGVHAEEQRIEKPHIVELRHPK HHCCCCCEEEEEECCCCEEEEEEEEECCCCCCEEEEEEECCCCHHHHCCCCCEEEECCCH ELGGGRWLYTYEGSALRHLGNSCWNYAIRIYPHHEKLPHRFLLGLVKWRGFFE HCCCCEEEEEECCHHHHHHHHHHHCCEEEEEECHHCCHHHHHHHHHHHCCCCC >Mature Secondary Structure ADVETPTHDLIREKLPHPIKDLADLAYNYWWSWNRRATRLWEYIDPVHWREHKNPVKLL CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHCCCCCEEEE LDVSEERLEELLKDDDFMNLYELVMEQFRDYMNPDSTWFSTNYPKWDKPIVYLCMEYGIS EECCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHCCC RTLPIYSGGLGILAGDHVKTASDLGLPFIAIGLLYKHGYFKQEIDRDGRQIEIFPEYRPE CCCCEEECCEEEEECCCCCCHHHCCCHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCC EMPIKPVLGKDGKPLLIEVPIEDRIVYARASEVEVGRVKIYLLDTDVPENSADDRTICDY CCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEEEEEEEECCCCCCCCCCHHHHHH LYNAEIDKRIKQEILLGIGGMRLLKALGIEPGVVHLNEGHPAFANLQRIAWYMDEGLTFT HHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHH EALSIVRGTTVFTTHTPVPAGHDRFPIEEVRKRLAKFLEDKDERLLELGRERDEINMTLL HHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEE AIRTSSYVNGVSKLHAEVSKRMWQNLWPGVPLDEIPIEGITNGVHTMTWVHSEMRKLFDR EEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH YLGKAWREHTNIEGLWYAIERIPDEELWEAHLKAKREFIELLKRKIRARNERLGIDDPLP HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC EIDENALIIGFARRFATYKRATLLFTDIERLKRLLNNPERPVYIVFGGKAHPMDEAGKEF CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH LKKVYEASQMPEFRGKIFVLENYDMGSARLMVAGVDLWLNNPRRPMEASGTSGMKAGLNG HHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHCCCH VLNASIYEGWWVEGYNGRNGWIIGEESTEPETEADDIKDAESLYNLLEREIIPTYYGNRG HEECCEECCEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCC KWIYMMKESIKSIAPRFSTHRMVKEYMDRFYSKAMSNYIWLTRGNYAGAKEMAAWKDRVI CEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHH SAWNNVSIESVAIKDGSRLEILVYLDELKPEDVRLELYYGVHAEEQRIEKPHIVELRHPK HHCCCCCEEEEEECCCCEEEEEEEEECCCCCCEEEEEEECCCCHHHHCCCCCEEEECCCH ELGGGRWLYTYEGSALRHLGNSCWNYAIRIYPHHEKLPHRFLLGLVKWRGFFE HCCCCEEEEEECCHHHHHHHHHHHCCEEEEEECHHCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]