Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

Click here to switch to the map view.

The map label for this gene is 212223336

Identifier: 212223336

GI number: 212223336

Start: 165961

End: 167247

Strand: Reverse

Name: 212223336

Synonym: TON_0190

Alternate gene names: NA

Gene position: 167247-165961 (Counterclockwise)

Preceding gene: 212223337

Following gene: 212223329

Centisome position: 9.05

GC content: 49.73

Gene sequence:

>1287_bases
ATGGATGAAATTAAGAAGTGGACAATATACCTGATATTCCTTGTTGCCGGATTCGCCACTGGAGCAGGTAGCATCGGTCT
ATTCCCGCAGTTCTGGCTCCAGTACGGTTTGACTGGAATGGTTGTGCACTTAGTATTCCTTGCAATACTAACGTATGTCG
CAATACTCGAGGCTGAGACCGTCATGAAATCCGGCTACTACTTCGTTGAACTCTACAACAAAGTCTCAAAACGGCCCGCT
ATGGTGCTCTCAATCTTCGCTGCCATTGCAATGTTCCTCTCGTACTACACCGCCAACACCATGCTGACCGTTCTCTCACC
GGTTCTTGGAACAGGAACCGTCGCCAGGCTCATAGCCAAGATACTGATGTTTGCTATAGCCTTCGTTATCCTCACTAGGG
CTAAAGAGAAGACCTTCGCAATCATGGCGATAGGTTCTGTGATATTTGTCGTCGCGGTTACAATAACTACGGTTGCGTTC
AAGGTACAGATATCTGAGGGTGCCACCTACCTGGCAATGGCCAAGCACATGCTCGTTGCAAGGCACCCAATAACACTTGA
CCTCATAAAAGCTGCCGCTGAAAGGGCAATCTACGGTGTTGGACTTGGATTTGCATTCTACTTGATGCTCGGAAGCTTTA
TCAACGAGCGCTTCAACGCGAAGGTAATCATTGGGGTTGGAATCCTGGTTCAGCTTTTCATCGGGATTCTATCAACGATA
ACTGTTGTCTATGCAATTGCTCCCACCACCCCTGACAGGCTTCTCCAGTATGTCCATGGTGGTGAAGAAGGTGCTATTCA
GCTCATGGGCGAACTGCCACACATCCTTGCGGACTATCCGACGCTGATACTCCTCATAGGAATCTCTGCGTTCTTTGCAG
GTATCACCAGTCTGCTGCCAACTGCGGAGATCGGTCTCCAGATAGTTGAATCAACCCTTAGGGTGAGCAGGAATAAAGCT
GCTGCCTATCTTGTAGCTGTGGCCCTTGCAATAGGCGTAATAGACTCCTCTCCATCAACAGCAGACATGGTGCTCAAAGC
AGTGAGTGTGACAACGTTCTTCACGGCAATTTTTGAGCTCTATCCAGTGCTGGCTTCCAAGGAAAAACCATCAACTTCAG
CCCTCGCAATGGCTGGAATAGCAGCGGTGCTGTTCCTCGTTGGTGGTCTCTACGCCCTATTTGCAGTCTTCAGGGCTGGC
GGCGTCTACGTTGTCTCGGGAATCATTGCCGCGGTAGTGATTCTGTTCGGTCTCTTCGGCGACAAACTTGTGCCCGAAAA
GGCCTGA

Upstream 100 bases:

>100_bases
CCATAAACTAGAAGTAAGAACTTTTAGACGTTCCTCGTGGGAAGTCATATTTTTAACCTCAAACGTCCATTGTGGGATAT
ACAAACCAGGGGGTGAAACC

Downstream 100 bases:

>100_bases
ATAGGCCCCATATCCTTATTTTTGTTTTGCCATGGAAAATAAAAGAAGAGGTCACTTGTGGGCGAATATCGCCACCACTT
TCTCGGGTGTCACATCATCT

Product: membrane protein, conserved

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MDEIKKWTIYLIFLVAGFATGAGSIGLFPQFWLQYGLTGMVVHLVFLAILTYVAILEAETVMKSGYYFVELYNKVSKRPA
MVLSIFAAIAMFLSYYTANTMLTVLSPVLGTGTVARLIAKILMFAIAFVILTRAKEKTFAIMAIGSVIFVVAVTITTVAF
KVQISEGATYLAMAKHMLVARHPITLDLIKAAAERAIYGVGLGFAFYLMLGSFINERFNAKVIIGVGILVQLFIGILSTI
TVVYAIAPTTPDRLLQYVHGGEEGAIQLMGELPHILADYPTLILLIGISAFFAGITSLLPTAEIGLQIVESTLRVSRNKA
AAYLVAVALAIGVIDSSPSTADMVLKAVSVTTFFTAIFELYPVLASKEKPSTSALAMAGIAAVLFLVGGLYALFAVFRAG
GVYVVSGIIAAVVILFGLFGDKLVPEKA

Sequences:

>Translated_428_residues
MDEIKKWTIYLIFLVAGFATGAGSIGLFPQFWLQYGLTGMVVHLVFLAILTYVAILEAETVMKSGYYFVELYNKVSKRPA
MVLSIFAAIAMFLSYYTANTMLTVLSPVLGTGTVARLIAKILMFAIAFVILTRAKEKTFAIMAIGSVIFVVAVTITTVAF
KVQISEGATYLAMAKHMLVARHPITLDLIKAAAERAIYGVGLGFAFYLMLGSFINERFNAKVIIGVGILVQLFIGILSTI
TVVYAIAPTTPDRLLQYVHGGEEGAIQLMGELPHILADYPTLILLIGISAFFAGITSLLPTAEIGLQIVESTLRVSRNKA
AAYLVAVALAIGVIDSSPSTADMVLKAVSVTTFFTAIFELYPVLASKEKPSTSALAMAGIAAVLFLVGGLYALFAVFRAG
GVYVVSGIIAAVVILFGLFGDKLVPEKA
>Mature_428_residues
MDEIKKWTIYLIFLVAGFATGAGSIGLFPQFWLQYGLTGMVVHLVFLAILTYVAILEAETVMKSGYYFVELYNKVSKRPA
MVLSIFAAIAMFLSYYTANTMLTVLSPVLGTGTVARLIAKILMFAIAFVILTRAKEKTFAIMAIGSVIFVVAVTITTVAF
KVQISEGATYLAMAKHMLVARHPITLDLIKAAAERAIYGVGLGFAFYLMLGSFINERFNAKVIIGVGILVQLFIGILSTI
TVVYAIAPTTPDRLLQYVHGGEEGAIQLMGELPHILADYPTLILLIGISAFFAGITSLLPTAEIGLQIVESTLRVSRNKA
AAYLVAVALAIGVIDSSPSTADMVLKAVSVTTFFTAIFELYPVLASKEKPSTSALAMAGIAAVLFLVGGLYALFAVFRAG
GVYVVSGIIAAVVILFGLFGDKLVPEKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45778; Mature: 45778

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEIKKWTIYLIFLVAGFATGAGSIGLFPQFWLQYGLTGMVVHLVFLAILTYVAILEAET
CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
VMKSGYYFVELYNKVSKRPAMVLSIFAAIAMFLSYYTANTMLTVLSPVLGTGTVARLIAK
HHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ILMFAIAFVILTRAKEKTFAIMAIGSVIFVVAVTITTVAFKVQISEGATYLAMAKHMLVA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHH
RHPITLDLIKAAAERAIYGVGLGFAFYLMLGSFINERFNAKVIIGVGILVQLFIGILSTI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH
TVVYAIAPTTPDRLLQYVHGGEEGAIQLMGELPHILADYPTLILLIGISAFFAGITSLLP
HHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TAEIGLQIVESTLRVSRNKAAAYLVAVALAIGVIDSSPSTADMVLKAVSVTTFFTAIFEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
YPVLASKEKPSTSALAMAGIAAVLFLVGGLYALFAVFRAGGVYVVSGIIAAVVILFGLFG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
DKLVPEKA
CCCCCCCC
>Mature Secondary Structure
MDEIKKWTIYLIFLVAGFATGAGSIGLFPQFWLQYGLTGMVVHLVFLAILTYVAILEAET
CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
VMKSGYYFVELYNKVSKRPAMVLSIFAAIAMFLSYYTANTMLTVLSPVLGTGTVARLIAK
HHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ILMFAIAFVILTRAKEKTFAIMAIGSVIFVVAVTITTVAFKVQISEGATYLAMAKHMLVA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHH
RHPITLDLIKAAAERAIYGVGLGFAFYLMLGSFINERFNAKVIIGVGILVQLFIGILSTI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH
TVVYAIAPTTPDRLLQYVHGGEEGAIQLMGELPHILADYPTLILLIGISAFFAGITSLLP
HHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TAEIGLQIVESTLRVSRNKAAAYLVAVALAIGVIDSSPSTADMVLKAVSVTTFFTAIFEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
YPVLASKEKPSTSALAMAGIAAVLFLVGGLYALFAVFRAGGVYVVSGIIAAVVILFGLFG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
DKLVPEKA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA