| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223329
Identifier: 212223329
GI number: 212223329
Start: 158447
End: 158914
Strand: Reverse
Name: 212223329
Synonym: TON_0183
Alternate gene names: NA
Gene position: 158914-158447 (Counterclockwise)
Preceding gene: 212223336
Following gene: 212223320
Centisome position: 8.6
GC content: 52.35
Gene sequence:
>468_bases ATGCCCGATGTTAATCTGGTGGAGGACATGAGGAAGAGCGTAGCACCGCTCGCGGTAAGCGCCCTGGCGATAGTGGGGTT CTTTGCCCTCGCTCCGGCGTTTTCGCTTTATCCAGTTCTCGCGGGCAGGTATGGGGCAGAGACAATTGACGCGGTGACGG TGATACTCGGCATTGTAGGACTCTTTTCCCTGATGGCTGGCATCGCCCTCTGGAAGATGGAGACCCTACCCAGAAAAGTT GCCATTTATGAGATTATCGAGTTCCTGACGATGTGGTTCGGTGGGGTGGTGTGGATAAACGTCGTTACAAGCCTTAATGG TTTCACCGAAAAGGCCCTCGTCACGATCGTGTTTTTCCTGGCCTTGGTGGCGTTCCTTGAGATGCTCAGGAGAAAGCTCG ACCCAGGTAGATACAAACGGATATGGACTGCGTTCTGGATCATTAAGAATCGCGAAGAAAAGTTTTGA
Upstream 100 bases:
>100_bases AAGGCCGGCGCCATATCCCCTAGGCCACGGGCCCACGATGGTGGTTCATAACGGCCAAAGATAAACCTTGCGGTCTTTTT CGAAAATCTTTTAGGTTACC
Downstream 100 bases:
>100_bases GATGTCCGCCCGAGGGCGGACAAAAGAGGAAGGGAGTTCAGCCGAAGAGGGCACCGAGTCCAGCGAGGGCCTCCTCCTCG CTGGCCTCCTCCTCTTCTTC
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MPDVNLVEDMRKSVAPLAVSALAIVGFFALAPAFSLYPVLAGRYGAETIDAVTVILGIVGLFSLMAGIALWKMETLPRKV AIYEIIEFLTMWFGGVVWINVVTSLNGFTEKALVTIVFFLALVAFLEMLRRKLDPGRYKRIWTAFWIIKNREEKF
Sequences:
>Translated_155_residues MPDVNLVEDMRKSVAPLAVSALAIVGFFALAPAFSLYPVLAGRYGAETIDAVTVILGIVGLFSLMAGIALWKMETLPRKV AIYEIIEFLTMWFGGVVWINVVTSLNGFTEKALVTIVFFLALVAFLEMLRRKLDPGRYKRIWTAFWIIKNREEKF >Mature_154_residues PDVNLVEDMRKSVAPLAVSALAIVGFFALAPAFSLYPVLAGRYGAETIDAVTVILGIVGLFSLMAGIALWKMETLPRKVA IYEIIEFLTMWFGGVVWINVVTSLNGFTEKALVTIVFFLALVAFLEMLRRKLDPGRYKRIWTAFWIIKNREEKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17421; Mature: 17290
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDVNLVEDMRKSVAPLAVSALAIVGFFALAPAFSLYPVLAGRYGAETIDAVTVILGIVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LFSLMAGIALWKMETLPRKVAIYEIIEFLTMWFGGVVWINVVTSLNGFTEKALVTIVFFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ALVAFLEMLRRKLDPGRYKRIWTAFWIIKNREEKF HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PDVNLVEDMRKSVAPLAVSALAIVGFFALAPAFSLYPVLAGRYGAETIDAVTVILGIVG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LFSLMAGIALWKMETLPRKVAIYEIIEFLTMWFGGVVWINVVTSLNGFTEKALVTIVFFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ALVAFLEMLRRKLDPGRYKRIWTAFWIIKNREEKF HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA