| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is bcsP31 [H]
Identifier: 212223320
GI number: 212223320
Start: 151769
End: 152758
Strand: Reverse
Name: bcsP31 [H]
Synonym: TON_0174
Alternate gene names: 212223320
Gene position: 152758-151769 (Counterclockwise)
Preceding gene: 212223329
Following gene: 212223319
Centisome position: 8.27
GC content: 50.61
Gene sequence:
>990_bases ATGAAAAAAGTGATGTCAATCGGGCTCGTTGCCGTTTTGGTTCTTGCAGTGGTTATAGCTGGTTGTATTGGCAGTGAAGG AGGTCAGACGACGCAGACCCAGGAGATAACTATCTACACCGGTGGAACCAGCGGAGTTTACTTCCCACTGGGCTCAAAAT ACGCAGAGATACTCAGCAAGAACGGTGTCAATGCTAAGGCTGTTACCAGCGGTGCGAGTGTTGCCAATGCTAAAGCCATT GGTGATGGAACTGCCCAAGCTGCTATAATGCAGAATGATGTTGCATATTATGCATATCACGGTCTATACATGTTTGAGGG CAACAAGATTGAGAAGCTCCGTGGTGTTGCAGCGCTGTATCCTGAAACCGTCCAATTTGTCGTGAGGGCGGACAGTGACA TAAAGAGCCTCCAAGACCTTGCAGGCAAAAAGGTCGCAATCGGCGCCCCCGGAAGCGGTACTGCTGTTGCCGCGGAGCAG ATACTCAAAGCTGCAGGGGTATGGGACAGCATCCAGAAAGTTAACCAGGCCTTTAGCGAAGCTTCTCAGAGTCTCAAGCT TGGTCAGGTTGATGCTGCAGTCATAGTCTCGGGTGCTCCAACACCTGCAGTCAATCAGATTGCCGTTCAGACTCCCGTCA GGATTCTCCCGATTCCAGACGACATTCTAAACAAGCTTAAAGATGAGGGATACATCTTCTATGTGAGGCAGGTTCTCCCC AAGGACACGTACAACGGAATGACTGAAGACACTCCGACAGTTGCAGTTAAAGCTGTTCTCGTCGTCAGTGCCGATCTCCC AGAGGACGTCGTGTATCAGATGACCAAGATACTCTTTGACAACGTTGCCGAGCTCCAGAAAGTCCACGCCAAGACCCAGT ACATAAGCCTCGAGACTGCACTCGATGGCATGAGCATCCCGCTCCATCCTGGAGCCGCTAAATACTACGAAGAGAATGGC ATGACTATCCCGTCAGAGCTCAAACCTTGA
Upstream 100 bases:
>100_bases CGAAAAAGTAACGCAAACTATATAACCCGAAATATACTCCAATATCCTAATGTGGTCGTTTGACCATGTATGCACATTAA GGTTTGGGGGTGCACAAAAG
Downstream 100 bases:
>100_bases ATGGGTGAGCATCCTTGAGGAAGTCTTTTATTTTTTTGACTTTCCTGCTATCTTTAATTCTACTCTCCTATCCCCTGAAG GTTTTCATGATAAGCGATGG
Product: TRAP-type transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKKVMSIGLVAVLVLAVVIAGCIGSEGGQTTQTQEITIYTGGTSGVYFPLGSKYAEILSKNGVNAKAVTSGASVANAKAI GDGTAQAAIMQNDVAYYAYHGLYMFEGNKIEKLRGVAALYPETVQFVVRADSDIKSLQDLAGKKVAIGAPGSGTAVAAEQ ILKAAGVWDSIQKVNQAFSEASQSLKLGQVDAAVIVSGAPTPAVNQIAVQTPVRILPIPDDILNKLKDEGYIFYVRQVLP KDTYNGMTEDTPTVAVKAVLVVSADLPEDVVYQMTKILFDNVAELQKVHAKTQYISLETALDGMSIPLHPGAAKYYEENG MTIPSELKP
Sequences:
>Translated_329_residues MKKVMSIGLVAVLVLAVVIAGCIGSEGGQTTQTQEITIYTGGTSGVYFPLGSKYAEILSKNGVNAKAVTSGASVANAKAI GDGTAQAAIMQNDVAYYAYHGLYMFEGNKIEKLRGVAALYPETVQFVVRADSDIKSLQDLAGKKVAIGAPGSGTAVAAEQ ILKAAGVWDSIQKVNQAFSEASQSLKLGQVDAAVIVSGAPTPAVNQIAVQTPVRILPIPDDILNKLKDEGYIFYVRQVLP KDTYNGMTEDTPTVAVKAVLVVSADLPEDVVYQMTKILFDNVAELQKVHAKTQYISLETALDGMSIPLHPGAAKYYEENG MTIPSELKP >Mature_329_residues MKKVMSIGLVAVLVLAVVIAGCIGSEGGQTTQTQEITIYTGGTSGVYFPLGSKYAEILSKNGVNAKAVTSGASVANAKAI GDGTAQAAIMQNDVAYYAYHGLYMFEGNKIEKLRGVAALYPETVQFVVRADSDIKSLQDLAGKKVAIGAPGSGTAVAAEQ ILKAAGVWDSIQKVNQAFSEASQSLKLGQVDAAVIVSGAPTPAVNQIAVQTPVRILPIPDDILNKLKDEGYIFYVRQVLP KDTYNGMTEDTPTVAVKAVLVVSADLPEDVVYQMTKILFDNVAELQKVHAKTQYISLETALDGMSIPLHPGAAKYYEENG MTIPSELKP
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 34786; Mature: 34786
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVMSIGLVAVLVLAVVIAGCIGSEGGQTTQTQEITIYTGGTSGVYFPLGSKYAEILSK CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHC NGVNAKAVTSGASVANAKAIGDGTAQAAIMQNDVAYYAYHGLYMFEGNKIEKLRGVAALY CCCCCEEEECCCCCCCCHHCCCCCHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHHHHHC PETVQFVVRADSDIKSLQDLAGKKVAIGAPGSGTAVAAEQILKAAGVWDSIQKVNQAFSE HHHHHEEEECCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH ASQSLKLGQVDAAVIVSGAPTPAVNQIAVQTPVRILPIPDDILNKLKDEGYIFYVRQVLP HHHCCCCCCCCEEEEEECCCCCCCCCEEEECCEEEEECCHHHHHHHCCCCEEEEEEHHCC KDTYNGMTEDTPTVAVKAVLVVSADLPEDVVYQMTKILFDNVAELQKVHAKTQYISLETA CCCCCCCCCCCCHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHH LDGMSIPLHPGAAKYYEENGMTIPSELKP CCCCCCCCCCCHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKKVMSIGLVAVLVLAVVIAGCIGSEGGQTTQTQEITIYTGGTSGVYFPLGSKYAEILSK CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHC NGVNAKAVTSGASVANAKAIGDGTAQAAIMQNDVAYYAYHGLYMFEGNKIEKLRGVAALY CCCCCEEEECCCCCCCCHHCCCCCHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHHHHHC PETVQFVVRADSDIKSLQDLAGKKVAIGAPGSGTAVAAEQILKAAGVWDSIQKVNQAFSE HHHHHEEEECCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH ASQSLKLGQVDAAVIVSGAPTPAVNQIAVQTPVRILPIPDDILNKLKDEGYIFYVRQVLP HHHCCCCCCCCEEEEEECCCCCCCCCEEEECCEEEEECCHHHHHHHCCCCEEEEEEHHCC KDTYNGMTEDTPTVAVKAVLVVSADLPEDVVYQMTKILFDNVAELQKVHAKTQYISLETA CCCCCCCCCCCCHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHH LDGMSIPLHPGAAKYYEENGMTIPSELKP CCCCCCCCCCCHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]