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The map label for this gene is nifU [H]

Identifier: 209554191

GI number: 209554191

Start: 538164

End: 538613

Strand: Reverse

Name: nifU [H]

Synonym: UUR10_0488

Alternate gene names: 209554191

Gene position: 538613-538164 (Counterclockwise)

Preceding gene: 209554308

Following gene: 209554280

Centisome position: 61.59

GC content: 28.0

Gene sequence:

>450_bases
ATGGCATCTTATAATATCAATGACAATCTAACATTGCGTAGTATTATTATGGAACATTACGAACGGCCTAAAAATAAAGT
TTGCTTTGTACAAAATGAAACTGATTATTTATCATGTCATAATACAACAGAGGGTTGTAGTGATGATATTACAGTTTATG
TTAAATTAGTTAATCAAAAAATAGTTGATGTTGTTTTTTTAGGTACTGGTTGCGCAATTTCTACTTCATCGACCGATATT
ATTTGTGAGCTTGTAAAAAACCAAGATCTTCAGCAAGCTTTAGAATTAATTAATAATTATTTAAATATGATTCAAGGCTT
AGAATACAACCAAGATATTATGCAAGAACTAATCGCTTTTCATAATGTAAAAAATCAAATGAATCGAATTCGTTGTGCAC
GAATTGGAATAAACGCTTTAAAAACATGTTTAGAGCAATATAAACAATAA

Upstream 100 bases:

>100_bases
GAATGTGCTATTCGTGCTTCGTTTTATATATATAATGATTTTAGTGATGTTGATAAACTAGTTCAAGCAATTAAAGAGTA
TCAAAAAGGAGATGAATTAA

Downstream 100 bases:

>100_bases
AATTACATTAAATATTTATTAAAATTAAATATAAAAAAGTAGGAATAAATAGATAAAATGGCTAAGAAATTAGAAAAAAT
TATAACAAGAAACGAGAATT

Product: SUF system FeS assembly protein, NifU family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MASYNINDNLTLRSIIMEHYERPKNKVCFVQNETDYLSCHNTTEGCSDDITVYVKLVNQKIVDVVFLGTGCAISTSSTDI
ICELVKNQDLQQALELINNYLNMIQGLEYNQDIMQELIAFHNVKNQMNRIRCARIGINALKTCLEQYKQ

Sequences:

>Translated_149_residues
MASYNINDNLTLRSIIMEHYERPKNKVCFVQNETDYLSCHNTTEGCSDDITVYVKLVNQKIVDVVFLGTGCAISTSSTDI
ICELVKNQDLQQALELINNYLNMIQGLEYNQDIMQELIAFHNVKNQMNRIRCARIGINALKTCLEQYKQ
>Mature_148_residues
ASYNINDNLTLRSIIMEHYERPKNKVCFVQNETDYLSCHNTTEGCSDDITVYVKLVNQKIVDVVFLGTGCAISTSSTDII
CELVKNQDLQQALELINNYLNMIQGLEYNQDIMQELIAFHNVKNQMNRIRCARIGINALKTCLEQYKQ

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 17117; Mature: 16986

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASYNINDNLTLRSIIMEHYERPKNKVCFVQNETDYLSCHNTTEGCSDDITVYVKLVNQK
CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHH
IVDVVFLGTGCAISTSSTDIICELVKNQDLQQALELINNYLNMIQGLEYNQDIMQELIAF
HHHHEEECCCCEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
HNVKNQMNRIRCARIGINALKTCLEQYKQ
HHHHHHHHHHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure 
ASYNINDNLTLRSIIMEHYERPKNKVCFVQNETDYLSCHNTTEGCSDDITVYVKLVNQK
CCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHH
IVDVVFLGTGCAISTSSTDIICELVKNQDLQQALELINNYLNMIQGLEYNQDIMQELIAF
HHHHEEECCCCEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
HNVKNQMNRIRCARIGINALKTCLEQYKQ
HHHHHHHHHHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]