| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is phnI [H]
Identifier: 209551693
GI number: 209551693
Start: 4302572
End: 4303678
Strand: Reverse
Name: phnI [H]
Synonym: Rleg2_4122
Alternate gene names: 209551693
Gene position: 4303678-4302572 (Counterclockwise)
Preceding gene: 209551694
Following gene: 209551692
Centisome position: 94.84
GC content: 65.58
Gene sequence:
>1107_bases ATGTATGTTGCCGTCAAGGGTGGCGAGGCCGCCATCGCCAATGCCCACCGCCTGCTCGCCGACCGCCGCCGCGGCGACCG TTCGCTGCCGGCAATCGGCATTGACCAGATCGTGGCGCAGCTGGCGCTCGCCGTCGACCGGGTCATGGCCGAGGCCTCGC TTTTCGACCGCACGCTCGCAGCACTCGCCGTCCGCCAGTCGCGCGGCGATATGATCGAGGCGATCTTCCTGCTGCGCGCC TATCGCACGACGCTGCCGCGTTTCGGCTATTCGAGGCCGCTCGACACGGCTGATATGACGATCGAACGCCGGATCTCGGC GACCTACAAGGATCTGCCGGGCGGCCAGCTTCTGGGACCCACCTTCGATTATACCCACCGCCTGCTCGATCCCTCGCTGC TTGAGGACGAGGCGGTCGAAGCGCCCGCCCAGCGCGCCGCCGAAACCGGCCGCGTCATGCGGGTCTCCGAAATCCTCGGC GAGGAAGGCCTGATCGAGGCCGACGGCGACATGCCCGAAGATCACGAGATCGGTGATCTCACCCGCGAGCCGATGGAATT CCCGATGACCCGCGATCTGCGCCTGCAGGCGCTCGCCCGCGGCGACGAAGGTTTCCTGCTGGCGCTCGGCTATTCCACCC AGCGCGGTTATGGCCGCAACCACCCCTTTACAGGGGAGATCCGCATCGGCGAGGTCGAGGTGGAATTCGATGTGCCGGAA CTCGGCTTCGCCGTTTCGCTCGGCGTGATCCAGGTCACCGAGTGCCAGATGGTCAATCAGTTCAAGGGTTCGGCCAAGGC GCCGCCGCAATTCACCCGCGGCTACGGCCTGGTCTTCGGCCAGAGCGAGCGCAAGGCGATGGCGATGTCGCTGGTGGATC GCGCATTGCGGGCTGAAGAGCTCGGCGAGGATATCACCGCGCCGGCCCAGGACGAGGAATTCGTCATCTCCCATTCCGAC AACGTCCAGGCGACCGGCTTCGTCGAGCACCTGAAGCTTCCGCATTATGTGGACTTCCAAGCCGAACTCGATCTCGTCCG CCGCATGCGCCGTGAATTCGAAGCCGCCCGCAGCAGCGGCGAAGATATGAAGGAAGCCGCCGAATGA
Upstream 100 bases:
>100_bases GCGCTCTTCCCGCGCGGCATCGACATCGTGCTGACATCGGCGACACGTTTTCTCTGCCTGCCGCGCACCACCAAGATCAC AGCAACGGAGATCTGAGCTC
Downstream 100 bases:
>100_bases GCGATCTGGCCAGCTACAACTTCGCCTATCTCGACGAACAGACCAAGCGGATGATCCGCCGCGCCATCCTGAAGGCGATC GCCATACCCGGCTACCAGGT
Product: phosphonate metabolism
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MYVAVKGGEAAIANAHRLLADRRRGDRSLPAIGIDQIVAQLALAVDRVMAEASLFDRTLAALAVRQSRGDMIEAIFLLRA YRTTLPRFGYSRPLDTADMTIERRISATYKDLPGGQLLGPTFDYTHRLLDPSLLEDEAVEAPAQRAAETGRVMRVSEILG EEGLIEADGDMPEDHEIGDLTREPMEFPMTRDLRLQALARGDEGFLLALGYSTQRGYGRNHPFTGEIRIGEVEVEFDVPE LGFAVSLGVIQVTECQMVNQFKGSAKAPPQFTRGYGLVFGQSERKAMAMSLVDRALRAEELGEDITAPAQDEEFVISHSD NVQATGFVEHLKLPHYVDFQAELDLVRRMRREFEAARSSGEDMKEAAE
Sequences:
>Translated_368_residues MYVAVKGGEAAIANAHRLLADRRRGDRSLPAIGIDQIVAQLALAVDRVMAEASLFDRTLAALAVRQSRGDMIEAIFLLRA YRTTLPRFGYSRPLDTADMTIERRISATYKDLPGGQLLGPTFDYTHRLLDPSLLEDEAVEAPAQRAAETGRVMRVSEILG EEGLIEADGDMPEDHEIGDLTREPMEFPMTRDLRLQALARGDEGFLLALGYSTQRGYGRNHPFTGEIRIGEVEVEFDVPE LGFAVSLGVIQVTECQMVNQFKGSAKAPPQFTRGYGLVFGQSERKAMAMSLVDRALRAEELGEDITAPAQDEEFVISHSD NVQATGFVEHLKLPHYVDFQAELDLVRRMRREFEAARSSGEDMKEAAE >Mature_368_residues MYVAVKGGEAAIANAHRLLADRRRGDRSLPAIGIDQIVAQLALAVDRVMAEASLFDRTLAALAVRQSRGDMIEAIFLLRA YRTTLPRFGYSRPLDTADMTIERRISATYKDLPGGQLLGPTFDYTHRLLDPSLLEDEAVEAPAQRAAETGRVMRVSEILG EEGLIEADGDMPEDHEIGDLTREPMEFPMTRDLRLQALARGDEGFLLALGYSTQRGYGRNHPFTGEIRIGEVEVEFDVPE LGFAVSLGVIQVTECQMVNQFKGSAKAPPQFTRGYGLVFGQSERKAMAMSLVDRALRAEELGEDITAPAQDEEFVISHSD NVQATGFVEHLKLPHYVDFQAELDLVRRMRREFEAARSSGEDMKEAAE
Specific function: Belongs to an operon involved in utilization of glyphosate and other phosphonates [H]
COG id: COG3626
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnI family [H]
Homologues:
Organism=Escherichia coli, GI1790537, Length=357, Percent_Identity=60.7843137254902, Blast_Score=416, Evalue=1e-117,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008773 [H]
Pfam domain/function: PF05861 PhnI [H]
EC number: NA
Molecular weight: Translated: 40818; Mature: 40818
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVAVKGGEAAIANAHRLLADRRRGDRSLPAIGIDQIVAQLALAVDRVMAEASLFDRTLA CEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAVRQSRGDMIEAIFLLRAYRTTLPRFGYSRPLDTADMTIERRISATYKDLPGGQLLGP HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC TFDYTHRLLDPSLLEDEAVEAPAQRAAETGRVMRVSEILGEEGLIEADGDMPEDHEIGDL CHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCCEEECCCCCCCCCCCCCC TREPMEFPMTRDLRLQALARGDEGFLLALGYSTQRGYGRNHPFTGEIRIGEVEVEFDVPE CCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCC LGFAVSLGVIQVTECQMVNQFKGSAKAPPQFTRGYGLVFGQSERKAMAMSLVDRALRAEE CCCEEEECEEEEHHHHHHHHHCCCCCCCCCHHCCCEEEECCCHHHHHHHHHHHHHHHHHH LGEDITAPAQDEEFVISHSDNVQATGFVEHLKLPHYVDFQAELDLVRRMRREFEAARSSG HCCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHCCC EDMKEAAE HHHHHHCC >Mature Secondary Structure MYVAVKGGEAAIANAHRLLADRRRGDRSLPAIGIDQIVAQLALAVDRVMAEASLFDRTLA CEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAVRQSRGDMIEAIFLLRAYRTTLPRFGYSRPLDTADMTIERRISATYKDLPGGQLLGP HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC TFDYTHRLLDPSLLEDEAVEAPAQRAAETGRVMRVSEILGEEGLIEADGDMPEDHEIGDL CHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCCEEECCCCCCCCCCCCCC TREPMEFPMTRDLRLQALARGDEGFLLALGYSTQRGYGRNHPFTGEIRIGEVEVEFDVPE CCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCC LGFAVSLGVIQVTECQMVNQFKGSAKAPPQFTRGYGLVFGQSERKAMAMSLVDRALRAEE CCCEEEECEEEEHHHHHHHHHCCCCCCCCCHHCCCEEEECCCHHHHHHHHHHHHHHHHHH LGEDITAPAQDEEFVISHSDNVQATGFVEHLKLPHYVDFQAELDLVRRMRREFEAARSSG HCCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHCCC EDMKEAAE HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481431 [H]