| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is phnH [H]
Identifier: 209551694
GI number: 209551694
Start: 4303683
End: 4304291
Strand: Reverse
Name: phnH [H]
Synonym: Rleg2_4123
Alternate gene names: 209551694
Gene position: 4304291-4303683 (Counterclockwise)
Preceding gene: 209551695
Following gene: 209551693
Centisome position: 94.85
GC content: 66.17
Gene sequence:
>609_bases ATGGGCCTGAAGACAGAAGCCTTGACCGGCGGCTTTGCCGAGCCGGTCTTCGACGCCCAGAGTGTCTTCAAGATGCTGAT GGACGGCATGGCCCGCCCCGGCACGATCCAGACCGTGCGGCCCGATATCGCGCCGCCTCTGCCGCTCGGCATCGCCGCCG GCACGATCGCGCTGACGCTTTGCGACCACGACACATCAGTCTGGCTTTCCCAGGGGCTGGCGAAATCCGCCGTGCCGGAT TGGCTCGGCTTCCATACCGGCGCGCCTTTGACCACTGAGAAGGCCGAGGCGCGCTTCGCGTTCACGGAAGCGGGCATCCC GCTTTGCCCGTTCAGCCTCTTTGCCTCGGGCACGCAGGAATATCCCGACCGCTCGACGACGCTCGTCATCGAACTTTCCG CACTCGAAGGTGGGCGCAGGCTGGCGCTGATGGGTCCCGGCATCCAGAGCGTCGCGGAGATCGCGCCGGTCGGCCTGCCG GAGACCTTCCTGCGGCTCTGGACCGAGAACCGCGCGCTCTTCCCGCGCGGCATCGACATCGTGCTGACATCGGCGACACG TTTTCTCTGCCTGCCGCGCACCACCAAGATCACAGCAACGGAGATCTGA
Upstream 100 bases:
>100_bases TGCCGATCACTGAGCGGATCGCCACAGCCGAACGCCGCAAGGCGGACGAGACGGCGGCCACCCGCGTCGACTTCTTCACC ATGGTCAGGGGAGACAACTG
Downstream 100 bases:
>100_bases GCTCATGTATGTTGCCGTCAAGGGTGGCGAGGCCGCCATCGCCAATGCCCACCGCCTGCTCGCCGACCGCCGCCGCGGCG ACCGTTCGCTGCCGGCAATC
Product: carbon-phosphorus lyase complex subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MGLKTEALTGGFAEPVFDAQSVFKMLMDGMARPGTIQTVRPDIAPPLPLGIAAGTIALTLCDHDTSVWLSQGLAKSAVPD WLGFHTGAPLTTEKAEARFAFTEAGIPLCPFSLFASGTQEYPDRSTTLVIELSALEGGRRLALMGPGIQSVAEIAPVGLP ETFLRLWTENRALFPRGIDIVLTSATRFLCLPRTTKITATEI
Sequences:
>Translated_202_residues MGLKTEALTGGFAEPVFDAQSVFKMLMDGMARPGTIQTVRPDIAPPLPLGIAAGTIALTLCDHDTSVWLSQGLAKSAVPD WLGFHTGAPLTTEKAEARFAFTEAGIPLCPFSLFASGTQEYPDRSTTLVIELSALEGGRRLALMGPGIQSVAEIAPVGLP ETFLRLWTENRALFPRGIDIVLTSATRFLCLPRTTKITATEI >Mature_201_residues GLKTEALTGGFAEPVFDAQSVFKMLMDGMARPGTIQTVRPDIAPPLPLGIAAGTIALTLCDHDTSVWLSQGLAKSAVPDW LGFHTGAPLTTEKAEARFAFTEAGIPLCPFSLFASGTQEYPDRSTTLVIELSALEGGRRLALMGPGIQSVAEIAPVGLPE TFLRLWTENRALFPRGIDIVLTSATRFLCLPRTTKITATEI
Specific function: Belongs to an operon involved in utilization of glyphosate and other phosphonates [H]
COG id: COG3625
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnH family [H]
Homologues:
Organism=Escherichia coli, GI1790538, Length=190, Percent_Identity=40.5263157894737, Blast_Score=129, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008772 [H]
Pfam domain/function: PF05845 PhnH [H]
EC number: NA
Molecular weight: Translated: 21572; Mature: 21441
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLKTEALTGGFAEPVFDAQSVFKMLMDGMARPGTIQTVRPDIAPPLPLGIAAGTIALTL CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEECCEEEEEE CDHDTSVWLSQGLAKSAVPDWLGFHTGAPLTTEKAEARFAFTEAGIPLCPFSLFASGTQE ECCCCHHHHHHCHHHHCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCC YPDRSTTLVIELSALEGGRRLALMGPGIQSVAEIAPVGLPETFLRLWTENRALFPRGIDI CCCCCEEEEEEEEECCCCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHCCCEECCCCCEE VLTSATRFLCLPRTTKITATEI EEECCCEEEEECCCCEEEEECC >Mature Secondary Structure GLKTEALTGGFAEPVFDAQSVFKMLMDGMARPGTIQTVRPDIAPPLPLGIAAGTIALTL CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEECCEEEEEE CDHDTSVWLSQGLAKSAVPDWLGFHTGAPLTTEKAEARFAFTEAGIPLCPFSLFASGTQE ECCCCHHHHHHCHHHHCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCC YPDRSTTLVIELSALEGGRRLALMGPGIQSVAEIAPVGLPETFLRLWTENRALFPRGIDI CCCCCEEEEEEEEECCCCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHCCCEECCCCCEE VLTSATRFLCLPRTTKITATEI EEECCCEEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481431 [H]