| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209551684
Identifier: 209551684
GI number: 209551684
Start: 4294355
End: 4295050
Strand: Reverse
Name: 209551684
Synonym: Rleg2_4113
Alternate gene names: NA
Gene position: 4295050-4294355 (Counterclockwise)
Preceding gene: 209551685
Following gene: 209551683
Centisome position: 94.65
GC content: 62.21
Gene sequence:
>696_bases TTGCGCTACGCTCTCTATTTCTCGCCGCCGAAGGATGATCCCCTGACCGGCGCGGCCTCGCTCTGGCTCGGCCGCGATGC ATTTAACGGCGAGACCTATCCTGCGCCGGATGAAGCGCAACTCGGTGCGGCAGAACAGTTCGAACTGACCGCCGACCCGC GCCGCTACGGCTTTCACGCGACGATCAAGGCGCCGTTTTCGCTCGCCGCCTCGGTCACCGAGAAGGATCTGATGGCGGTC GCCGAGGAGTTTGCCGCGCGCACTGAAGCTTTCGAGATTCCCGAACTGGTGCTCGGCCAGCTCGGCCGTTTTTTTGCCCT TGTTCCCGGTTCTCTTCATCAACCTCTTCAGGATTTCGCCGCGAAGGTGGTAAGGTCCTTCGAACCGTTTCGCGCAGCGT TGTCCGAGGCCGATATGGCGCGGCGCAACCCGGAGAAGCTCAGCGACAGCCAGCGCGCCAATCTGCAGCGCTGGGGTTAT CCTTATGTGATGGAGGATTTCGGCTTCCACATGACGCTTACCGGCCAGGTGCCCGAGACGCGCGCCGCGGTGATGAAAGC CATTCTGACCGAGCGGTTTGCCGATTTCACCGGCCGGCCGATTACGATTTCCGGCCTTGCCGTCTTCACCGAGGAAACGC GCGGCGCCCCGTTCAAAGTTCATTCCTGGCTGCCGCTTTCCGGCGCCAAAAGCTGA
Upstream 100 bases:
>100_bases ATTCTGTCACGGAAATCTTTTAGCCGGGAGCTGCTTGCGGTTCGCCGCCAAATCACTGCACAGTGCGCTCCCCGTTTCGA CGATCCCCAGGATAAAAGCC
Downstream 100 bases:
>100_bases AAGACCCGACGAGATGAGCAAAGAGACCGTGTTTTCCAACGCCCGCATCGTTCTCGAGGATGACATCCTCGCAGGCTCGA TCCTCATTCGCGACGGCAAG
Product: phosphonate metabolism protein
Products: NA
Alternate protein names: Xylose Isomerase; Conserved Hypothethical Protein DUF
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MRYALYFSPPKDDPLTGAASLWLGRDAFNGETYPAPDEAQLGAAEQFELTADPRRYGFHATIKAPFSLAASVTEKDLMAV AEEFAARTEAFEIPELVLGQLGRFFALVPGSLHQPLQDFAAKVVRSFEPFRAALSEADMARRNPEKLSDSQRANLQRWGY PYVMEDFGFHMTLTGQVPETRAAVMKAILTERFADFTGRPITISGLAVFTEETRGAPFKVHSWLPLSGAKS
Sequences:
>Translated_231_residues MRYALYFSPPKDDPLTGAASLWLGRDAFNGETYPAPDEAQLGAAEQFELTADPRRYGFHATIKAPFSLAASVTEKDLMAV AEEFAARTEAFEIPELVLGQLGRFFALVPGSLHQPLQDFAAKVVRSFEPFRAALSEADMARRNPEKLSDSQRANLQRWGY PYVMEDFGFHMTLTGQVPETRAAVMKAILTERFADFTGRPITISGLAVFTEETRGAPFKVHSWLPLSGAKS >Mature_231_residues MRYALYFSPPKDDPLTGAASLWLGRDAFNGETYPAPDEAQLGAAEQFELTADPRRYGFHATIKAPFSLAASVTEKDLMAV AEEFAARTEAFEIPELVLGQLGRFFALVPGSLHQPLQDFAAKVVRSFEPFRAALSEADMARRNPEKLSDSQRANLQRWGY PYVMEDFGFHMTLTGQVPETRAAVMKAILTERFADFTGRPITISGLAVFTEETRGAPFKVHSWLPLSGAKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25568; Mature: 25568
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYALYFSPPKDDPLTGAASLWLGRDAFNGETYPAPDEAQLGAAEQFELTADPRRYGFHA CEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHCEEE TIKAPFSLAASVTEKDLMAVAEEFAARTEAFEIPELVLGQLGRFFALVPGSLHQPLQDFA EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHH AKVVRSFEPFRAALSEADMARRNPEKLSDSQRANLQRWGYPYVMEDFGFHMTLTGQVPET HHHHHCCHHHHHHHHHHHHHHCCHHHHCCHHHCCHHHCCCCEEECCCCEEEEEECCCCHH RAAVMKAILTERFADFTGRPITISGLAVFTEETRGAPFKVHSWLPLSGAKS HHHHHHHHHHHHHHHCCCCCEEEECEEEEECCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MRYALYFSPPKDDPLTGAASLWLGRDAFNGETYPAPDEAQLGAAEQFELTADPRRYGFHA CEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHCEEE TIKAPFSLAASVTEKDLMAVAEEFAARTEAFEIPELVLGQLGRFFALVPGSLHQPLQDFA EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHH AKVVRSFEPFRAALSEADMARRNPEKLSDSQRANLQRWGYPYVMEDFGFHMTLTGQVPET HHHHHCCHHHHHHHHHHHHHHCCHHHHCCHHHCCHHHCCCCEEECCCCEEEEEECCCCHH RAAVMKAILTERFADFTGRPITISGLAVFTEETRGAPFKVHSWLPLSGAKS HHHHHHHHHHHHHHHCCCCCEEEECEEEEECCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA