Click here to switch to the map view.

The map label for this gene is phnM [H]

Identifier: 209551683

GI number: 209551683

Start: 4293202

End: 4294326

Strand: Reverse

Name: phnM [H]

Synonym: Rleg2_4112

Alternate gene names: 209551683

Gene position: 4294326-4293202 (Counterclockwise)

Preceding gene: 209551684

Following gene: 209551682

Centisome position: 94.63

GC content: 64.27

Gene sequence:

>1125_bases
GTGTTTTCCAACGCCCGCATCGTTCTCGAGGATGACATCCTCGCAGGCTCGATCCTCATTCGCGACGGCAAGATCGCCGA
CATTTCCGAGGGAAGCTCGGTAGCCGGCGAAGATTTCGAAGGCGATTATGTCATTCCCGGCCTCGTCGAGCTGCACACCG
ATCACCTCGAAGGTCATTACCAACCGCGTCCAGGCATTCGCTGGAACAAGACTGCAGCGGTCCAGGCGCATGACGCCCAG
ATCGTCACCTCCGGCATCACCACGGTGTTCGACTGCCTGCGCATGGGTGCGGATGAGGACGGCGGCTTCGAACATGGCGA
GATGCGCGAGATGGCCGACGCCATCCAGTCGGCGGAGAAGGAGGGCCGGCTGCGCGCCGAGCACCTCCTCCACCTGCGTT
GCGAGGTTTCGGCCGACAATGTGCTCGAACATTTCGGCGATTTCGAAAACGACCCTCATGTGCGGCTCGTCTCGCTGATG
GACCATGCGCCCGGGCAACGTCAGTTCCAGACGATGGACCAATATATTTTCTACTACCAGAAGAAGCGGGGCCTGAGCGA
CGAGGTCTTCGCCCGTTTCGTCGCCAAGCGCCAGGCCGAATCGGCGCGCAATTCGACGCCGCATCGCAACGCCATCGCCA
AGGTCTGCGCCGAGCGCGGCATCACCGTCGCAAGCCATGACGATGCGACACTGTCGCATGTCGGCGAGGCGATCGACAAC
GGCGTGCGGCTTGCCGAATTCCCGACCAGCTTCGACGCCGCCCGCGCCTCGCACGAACACGGCATGAGTGTGCTGATGGG
GGCGCCGAACATCGTGCGCGGCAAGTCCCATTCCGGCAATATCGCCGCCCGCGACCTCGCCGAGATGGGCGTGCTCGACG
TGCTGTCCTCCGATTACGTGCCGCTCAGCCTGCTGCATGCGCCCTTCATCCTTGCCGATGAAGTCGAGAGTATTACCTTG
CCGAAGGCGATCGCCATGGTGACGTCGACGCCCGCCCGCACCGTCAGCCTCGACGATCGCGGCCGGATCGCGACGGGACT
GCGCGCCGATCTCGTCCGCGTCCACCGCGCGCATGGCGTGCCGGTGACACGCTCCGTCTGGCGCCAGGGACGCCGCGTCG
CATGA

Upstream 100 bases:

>100_bases
TTCACCGAGGAAACGCGCGGCGCCCCGTTCAAAGTTCATTCCTGGCTGCCGCTTTCCGGCGCCAAAAGCTGAAAGACCCG
ACGAGATGAGCAAAGAGACC

Downstream 100 bases:

>100_bases
GCCCGCGCGAACCCCACGCCGCAGCCGGAGCCGAGCGCGGCATCATGGTCGTCGTCGTCGGACCGAGCGGCGCCGGCAAG
GACACGCTGATGAACCTCGC

Product: phosphonate metabolism protein PhnM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MFSNARIVLEDDILAGSILIRDGKIADISEGSSVAGEDFEGDYVIPGLVELHTDHLEGHYQPRPGIRWNKTAAVQAHDAQ
IVTSGITTVFDCLRMGADEDGGFEHGEMREMADAIQSAEKEGRLRAEHLLHLRCEVSADNVLEHFGDFENDPHVRLVSLM
DHAPGQRQFQTMDQYIFYYQKKRGLSDEVFARFVAKRQAESARNSTPHRNAIAKVCAERGITVASHDDATLSHVGEAIDN
GVRLAEFPTSFDAARASHEHGMSVLMGAPNIVRGKSHSGNIAARDLAEMGVLDVLSSDYVPLSLLHAPFILADEVESITL
PKAIAMVTSTPARTVSLDDRGRIATGLRADLVRVHRAHGVPVTRSVWRQGRRVA

Sequences:

>Translated_374_residues
MFSNARIVLEDDILAGSILIRDGKIADISEGSSVAGEDFEGDYVIPGLVELHTDHLEGHYQPRPGIRWNKTAAVQAHDAQ
IVTSGITTVFDCLRMGADEDGGFEHGEMREMADAIQSAEKEGRLRAEHLLHLRCEVSADNVLEHFGDFENDPHVRLVSLM
DHAPGQRQFQTMDQYIFYYQKKRGLSDEVFARFVAKRQAESARNSTPHRNAIAKVCAERGITVASHDDATLSHVGEAIDN
GVRLAEFPTSFDAARASHEHGMSVLMGAPNIVRGKSHSGNIAARDLAEMGVLDVLSSDYVPLSLLHAPFILADEVESITL
PKAIAMVTSTPARTVSLDDRGRIATGLRADLVRVHRAHGVPVTRSVWRQGRRVA
>Mature_374_residues
MFSNARIVLEDDILAGSILIRDGKIADISEGSSVAGEDFEGDYVIPGLVELHTDHLEGHYQPRPGIRWNKTAAVQAHDAQ
IVTSGITTVFDCLRMGADEDGGFEHGEMREMADAIQSAEKEGRLRAEHLLHLRCEVSADNVLEHFGDFENDPHVRLVSLM
DHAPGQRQFQTMDQYIFYYQKKRGLSDEVFARFVAKRQAESARNSTPHRNAIAKVCAERGITVASHDDATLSHVGEAIDN
GVRLAEFPTSFDAARASHEHGMSVLMGAPNIVRGKSHSGNIAARDLAEMGVLDVLSSDYVPLSLLHAPFILADEVESITL
PKAIAMVTSTPARTVSLDDRGRIATGLRADLVRVHRAHGVPVTRSVWRQGRRVA

Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]

COG id: COG3454

COG function: function code P; Metal-dependent hydrolase involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790533, Length=376, Percent_Identity=47.8723404255319, Blast_Score=347, Evalue=8e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059
- InterPro:   IPR012696 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 41023; Mature: 41023

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSNARIVLEDDILAGSILIRDGKIADISEGSSVAGEDFEGDYVIPGLVELHTDHLEGHY
CCCCCEEEEECCEEEEEEEEECCCEEECCCCCCCCCCCCCCCEECCCHHHHHHHHHCCCC
QPRPGIRWNKTAAVQAHDAQIVTSGITTVFDCLRMGADEDGGFEHGEMREMADAIQSAEK
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
EGRLRAEHLLHLRCEVSADNVLEHFGDFENDPHVRLVSLMDHAPGQRQFQTMDQYIFYYQ
HCCHHHHHHEEEEEECCHHHHHHHHCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHH
KKRGLSDEVFARFVAKRQAESARNSTPHRNAIAKVCAERGITVASHDDATLSHVGEAIDN
HHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHC
GVRLAEFPTSFDAARASHEHGMSVLMGAPNIVRGKSHSGNIAARDLAEMGVLDVLSSDYV
CCEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
PLSLLHAPFILADEVESITLPKAIAMVTSTPARTVSLDDRGRIATGLRADLVRVHRAHGV
CHHHHHCCCHHHHCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCC
PVTRSVWRQGRRVA
CCCHHHHHCCCCCC
>Mature Secondary Structure
MFSNARIVLEDDILAGSILIRDGKIADISEGSSVAGEDFEGDYVIPGLVELHTDHLEGHY
CCCCCEEEEECCEEEEEEEEECCCEEECCCCCCCCCCCCCCCEECCCHHHHHHHHHCCCC
QPRPGIRWNKTAAVQAHDAQIVTSGITTVFDCLRMGADEDGGFEHGEMREMADAIQSAEK
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
EGRLRAEHLLHLRCEVSADNVLEHFGDFENDPHVRLVSLMDHAPGQRQFQTMDQYIFYYQ
HCCHHHHHHEEEEEECCHHHHHHHHCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHH
KKRGLSDEVFARFVAKRQAESARNSTPHRNAIAKVCAERGITVASHDDATLSHVGEAIDN
HHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHC
GVRLAEFPTSFDAARASHEHGMSVLMGAPNIVRGKSHSGNIAARDLAEMGVLDVLSSDYV
CCEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
PLSLLHAPFILADEVESITLPKAIAMVTSTPARTVSLDDRGRIATGLRADLVRVHRAHGV
CHHHHHCCCHHHHCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCC
PVTRSVWRQGRRVA
CCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]