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The map label for this gene is ybfB [H]

Identifier: 209551122

GI number: 209551122

Start: 3676637

End: 3677932

Strand: Direct

Name: ybfB [H]

Synonym: Rleg2_3546

Alternate gene names: 209551122

Gene position: 3676637-3677932 (Clockwise)

Preceding gene: 209551120

Following gene: 209551125

Centisome position: 81.02

GC content: 63.73

Gene sequence:

>1296_bases
ATGGTTTCCACAGCCCTTGCCTCCACCCTTGCCCGGCGCAACATCCACTACGGCTGGGTCGTCGTCGCCGCAACTTTCCT
CACCATGCTGGTCACGGCCGGCGCCATGGGCGCACCCGGCGTTCTCATCAAGCCGCTGCAGGACGAGTTCGGCTGGGAGA
CCTCGCAGATTTCATCAGCCCTTGCGATCCGCCTGATCCTTTTCGGTTTCATGGGCCCGTTCGCCGCCGCCTTCATGAAC
TATTTCGGCGTCCGCAAGGTCATCGTTTTCGCCCTGGCCCTGATCGGCGCCGGTTTCATCGGTTCGCTGTTCATGACCAA
GCTCTGGCATCTGTTGGCGCTCTGGGGCATCGTCGTCGGCTTCGGCACAGGTCTGACGGCCATGGTGCTCGCGGCCACGG
TCTCGACCCGCTGGTTCACTAAGCATCGCGGCCTCGTCGTCGGCATGCTTTCAGCGAGCTCGGCCACCGGCCAGCTCGTC
TTTCTGCCGCTGATGGCGGAGCTGACGGAACGCTACGGCTGGCGATCGACGGTGTTTTTCGTCTGCGCCATGATCATGGT
CGCAGCTCTTGCCGTGCTGGCCTTCATGCGTGACCGCCCGGCCGACCTGAACCTGCCGTCCGTCGGAGAAACGCAGGTGA
CACCGCCGCCGGCGGGCACCTCTCTCGGCGTTGCGCTGATGACGCCGATCACCGTGCTCAGGGAAATCTCCAAGACCTCG
ACCTTCTGGATCCTGTTTGCCACCTTCTTCATCTGCGGGCTCAGCACCAATGGCCTGATCCAGACCCATTTCGTCACCCT
CTGCGGCGATTTCGGCATCGTGCCGGTGGCCGCCGCCAGTGTCCTGGCAGTCATGGGCATCTTCGATTTCTTCGGCACGA
TCGGCTCCGGCTGGCTGTCGGACCGCTTCGACAATCGCTGGCTGCTGTTCTTTTACTACGGCTTTCGCGGCCTCTCGCTG
CTCTATCTGCCCTTCAGCGATTTCAGCTTTTACGGCCTCTCTATCTTCGCCGTCTTCTACGGCCTCGACTGGATTGCCAC
CGTGCCGCCGACCGTCAAGATCGCCGCCGACCGCTTCGGCCGCGAAAAGGCAGGCCTCGTTTTCGGCTGGGTCTTTGCCG
GTCATCAGCTGGGTGCGGCCACCGCCGCCTATGGCGCCGGCCTGTCGCGCACGGAGCTTTCGAGCTACCTGCCCGCCTTC
TTCGTCGCCGGCGCCTTCTGCCTGCTGGCCTCGATCCTGGCGATCACGCTGAAGAAGTCCGGCCTGACCGCTCCGGCAAC
CGCCGTCGCCCATTGA

Upstream 100 bases:

>100_bases
AAATATATGACGTCCATCATCAATAGGCAAGAAATATGATGACCATCATGTAAATCATTCCCGTATCTTCCCGAAGCTGA
ATCCGAACGGAATCTCGCCC

Downstream 100 bases:

>100_bases
GAATAGATATATGGCTCCGGCCTCGAAACGAGGCCGGAACTCTCTACCGGATCAGTCTGATAACTTCACTCACGCGTCTT
GCGCGTGCGGGCGCTCACAT

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MVSTALASTLARRNIHYGWVVVAATFLTMLVTAGAMGAPGVLIKPLQDEFGWETSQISSALAIRLILFGFMGPFAAAFMN
YFGVRKVIVFALALIGAGFIGSLFMTKLWHLLALWGIVVGFGTGLTAMVLAATVSTRWFTKHRGLVVGMLSASSATGQLV
FLPLMAELTERYGWRSTVFFVCAMIMVAALAVLAFMRDRPADLNLPSVGETQVTPPPAGTSLGVALMTPITVLREISKTS
TFWILFATFFICGLSTNGLIQTHFVTLCGDFGIVPVAAASVLAVMGIFDFFGTIGSGWLSDRFDNRWLLFFYYGFRGLSL
LYLPFSDFSFYGLSIFAVFYGLDWIATVPPTVKIAADRFGREKAGLVFGWVFAGHQLGAATAAYGAGLSRTELSSYLPAF
FVAGAFCLLASILAITLKKSGLTAPATAVAH

Sequences:

>Translated_431_residues
MVSTALASTLARRNIHYGWVVVAATFLTMLVTAGAMGAPGVLIKPLQDEFGWETSQISSALAIRLILFGFMGPFAAAFMN
YFGVRKVIVFALALIGAGFIGSLFMTKLWHLLALWGIVVGFGTGLTAMVLAATVSTRWFTKHRGLVVGMLSASSATGQLV
FLPLMAELTERYGWRSTVFFVCAMIMVAALAVLAFMRDRPADLNLPSVGETQVTPPPAGTSLGVALMTPITVLREISKTS
TFWILFATFFICGLSTNGLIQTHFVTLCGDFGIVPVAAASVLAVMGIFDFFGTIGSGWLSDRFDNRWLLFFYYGFRGLSL
LYLPFSDFSFYGLSIFAVFYGLDWIATVPPTVKIAADRFGREKAGLVFGWVFAGHQLGAATAAYGAGLSRTELSSYLPAF
FVAGAFCLLASILAITLKKSGLTAPATAVAH
>Mature_431_residues
MVSTALASTLARRNIHYGWVVVAATFLTMLVTAGAMGAPGVLIKPLQDEFGWETSQISSALAIRLILFGFMGPFAAAFMN
YFGVRKVIVFALALIGAGFIGSLFMTKLWHLLALWGIVVGFGTGLTAMVLAATVSTRWFTKHRGLVVGMLSASSATGQLV
FLPLMAELTERYGWRSTVFFVCAMIMVAALAVLAFMRDRPADLNLPSVGETQVTPPPAGTSLGVALMTPITVLREISKTS
TFWILFATFFICGLSTNGLIQTHFVTLCGDFGIVPVAAASVLAVMGIFDFFGTIGSGWLSDRFDNRWLLFFYYGFRGLSL
LYLPFSDFSFYGLSIFAVFYGLDWIATVPPTVKIAADRFGREKAGLVFGWVFAGHQLGAATAAYGAGLSRTELSSYLPAF
FVAGAFCLLASILAITLKKSGLTAPATAVAH

Specific function: Uhpc Is Required For Uhpt Expression, It May Act Jointly With The Uhpb Signaling Protein. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI292781289, Length=374, Percent_Identity=24.331550802139, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI40789261, Length=374, Percent_Identity=24.331550802139, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI34916028, Length=196, Percent_Identity=31.6326530612245, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI42475555, Length=418, Percent_Identity=25.5980861244019, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI291621700, Length=327, Percent_Identity=23.5474006116208, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI24431958, Length=337, Percent_Identity=23.1454005934718, Blast_Score=66, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17557434, Length=177, Percent_Identity=31.0734463276836, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI32567122, Length=177, Percent_Identity=31.0734463276836, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17550316, Length=174, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281360217, Length=184, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28573971, Length=184, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24652823, Length=166, Percent_Identity=30.1204819277108, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46248; Mature: 46248

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTALASTLARRNIHYGWVVVAATFLTMLVTAGAMGAPGVLIKPLQDEFGWETSQISSA
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHCCCHHHHHHH
LAIRLILFGFMGPFAAAFMNYFGVRKVIVFALALIGAGFIGSLFMTKLWHLLALWGIVVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGTGLTAMVLAATVSTRWFTKHRGLVVGMLSASSATGQLVFLPLMAELTERYGWRSTVFF
HCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEHHHHHHHHHHHCCCHHHHHH
VCAMIMVAALAVLAFMRDRPADLNLPSVGETQVTPPPAGTSLGVALMTPITVLREISKTS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TFWILFATFFICGLSTNGLIQTHFVTLCGDFGIVPVAAASVLAVMGIFDFFGTIGSGWLS
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
DRFDNRWLLFFYYGFRGLSLLYLPFSDFSFYGLSIFAVFYGLDWIATVPPTVKIAADRFG
HCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHCCCCCEEEHHHHCC
REKAGLVFGWVFAGHQLGAATAAYGAGLSRTELSSYLPAFFVAGAFCLLASILAITLKKS
CHHCCCEEEHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GLTAPATAVAH
CCCCCHHHCCC
>Mature Secondary Structure
MVSTALASTLARRNIHYGWVVVAATFLTMLVTAGAMGAPGVLIKPLQDEFGWETSQISSA
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHCCCHHHHHHH
LAIRLILFGFMGPFAAAFMNYFGVRKVIVFALALIGAGFIGSLFMTKLWHLLALWGIVVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGTGLTAMVLAATVSTRWFTKHRGLVVGMLSASSATGQLVFLPLMAELTERYGWRSTVFF
HCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEHHHHHHHHHHHCCCHHHHHH
VCAMIMVAALAVLAFMRDRPADLNLPSVGETQVTPPPAGTSLGVALMTPITVLREISKTS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TFWILFATFFICGLSTNGLIQTHFVTLCGDFGIVPVAAASVLAVMGIFDFFGTIGSGWLS
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
DRFDNRWLLFFYYGFRGLSLLYLPFSDFSFYGLSIFAVFYGLDWIATVPPTVKIAADRFG
HCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHCCCCCEEEHHHHCC
REKAGLVFGWVFAGHQLGAATAAYGAGLSRTELSSYLPAFFVAGAFCLLASILAITLKKS
CHHCCCEEEHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GLTAPATAVAH
CCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]