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The map label for this gene is ybaL [H]

Identifier: 209551125

GI number: 209551125

Start: 3679276

End: 3681024

Strand: Direct

Name: ybaL [H]

Synonym: Rleg2_3549

Alternate gene names: 209551125

Gene position: 3679276-3681024 (Clockwise)

Preceding gene: 209551122

Following gene: 209551127

Centisome position: 81.08

GC content: 64.04

Gene sequence:

>1749_bases
GTGCATCAGGAAGTAGGGCTTATCGCAACGGTTGCCGTCAGTTTCGTTTTCGCAGCGATCCTGGGTTATGGCGCCGACCG
GCTGCGGCTGCCGCCGCTCGTCGGCTATCTCCTCGCCGGCATTCTGATGGGTCCGTTCACGCCGGGTTTCGTCGCCGATA
CCGCCCTTGCCGGCCAGCTCGCCGAAATGGGCGTCATCCTGCTGATGTTTGGCGTCGGCCTGCATTTTTCCGCCTCCGAC
CTGCTCGCCGTCCGGGGGATCGCCGTGCCGGGCGCGATCGGACGCATCATCCTCGCCACCCTGTTGGGCATCGGCCTTTG
TAAACTCTGGGGCTGGAGCCTCGGCGCCGGCATCGTCTTGGGCCTCAGCCTGTCGGTGGCAAGCACCGTCGTGCTGCTGA
AGGCGCTGGAGGAGCGCAATCTCGTCAACGCGCCAAGCGGGCGTGTCGCCGTCGGCTGGCTGATCGTCGAGGATCTGGTG
ATGGTGCTGGCGCTGGTGTTGCTGCCGGCGCTCGCAGAGCTTCTCGGCGGCAACGCCGCCGCGACGAACAATCACGGCCT
TGGCGAGCTTTCCCTGGCGCTGACGATCGGCCTGACACTCTTGAAGGTGGCGGGCTTCGCCGCCATGGCGATCTTCCTCG
GCCCGCGCATCGTGCCCTGGCTGCTGACGATGATCGCCCGCACCGGTTCGCGTGAACTCTTCACGCTGACGGTCCTGGCG
ATCGCGCTGGGCATCGCCTTCGGCTCGGCGGCGATCTTCGGCGTCTCCTTTGCGCTCGGCGCCTTTTTTGCTGGCGTCGT
CATGAGCGAATCCCAGCTCAGCCACAGGGCGGCCGCCGACTCGCTGCCGCTGCAGAACGCCTTCTCCGTGCTGTTTTTCG
TCTCCGTCGGCATGCTCTTCGACCCATCGATCCTGGTCAGCCAGCCGCTGGCGGTGATCGGCGCGCTGGCGCTCGTCATC
CTCGGCAAGGCCATCATCACGTTCCTTATCGTCATACTGCTGCGATATCCGATCGGCCTGGGGCTGACATTGGCCGGCGG
CCTTGCCCAGATCGGCGAATTCTCCTTCATCCTCGCCGGCCTCGGCGTCTCACTCGGGCTGCTGCCGCATGAGGGCCAGG
ATCTGATCCTTGCCGCCGCAATCCTGTCGATCACGCTCAACCCGATCGTGATCCTGGCGACCGACGGTTTGAAGAAATTC
GTCCATTCGAGATGGCCCTCCCTGTGGGAAAGCTACGGCAGGACGAGGCAGAAGACGCTCAGCAAGGAACTGGAAAAGAT
CAGGGCGCTCGGCGAGGAGCGCGAACGCGAGCATCAGCTGAAAATGCAGCAGCTGATCGAGACTTTTCCCTTGTTCTCCG
AGGTCAACGAAGACGCGCAGGAGGAACTGCTGCTGCTCTTCAAGGCAAAATCCGCTCCACCAGGCGAACGCGTTATCCGC
CGCGGCGACCGCGGCGACGGCATGTATTTCATTTCTTCGGGGGCGGTGGAAGTCCGGCTCGCCAGCGGCGCGATCCGCCT
GGAGCCCGGCGCCTTCTTCGGCGAAATGGCGCTTCTGACCGGTGGACGGCGCACCGCCGACGTCATCGCCGTCGACTTCT
GCCAATTCGAAGTGCTCGAACGGCGCGACTTCAACATGTTCATGTCGCGCCATCCCAATCTGCGCGCCGCCGTCAGCGAA
ATGGCGCAGAAACGCACGGAGATGAACGACCTGCGTCAGCAATGGGAAAAGTCGATGGACCTCTCCTGA

Upstream 100 bases:

>100_bases
GCAAGGATTGAGAACAAGGTCCGCCACCCGCCAAATCAACTGTTTAATTTTGCTTGTACTTCGTACAGAGTGGCCGCCGC
CATCACAGGAAGGGTCGGAC

Downstream 100 bases:

>100_bases
GGCAACTCCGACGCATGTCTGCGAATTGCGATTGCGATTGCCTCAGCCAGCCGGCCAATAGCCGTCGGCGCGGAAATCCT
CCGGGATCGGGTCGAGCCGC

Product: cyclic nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 582; Mature: 582

Protein sequence:

>582_residues
MHQEVGLIATVAVSFVFAAILGYGADRLRLPPLVGYLLAGILMGPFTPGFVADTALAGQLAEMGVILLMFGVGLHFSASD
LLAVRGIAVPGAIGRIILATLLGIGLCKLWGWSLGAGIVLGLSLSVASTVVLLKALEERNLVNAPSGRVAVGWLIVEDLV
MVLALVLLPALAELLGGNAAATNNHGLGELSLALTIGLTLLKVAGFAAMAIFLGPRIVPWLLTMIARTGSRELFTLTVLA
IALGIAFGSAAIFGVSFALGAFFAGVVMSESQLSHRAAADSLPLQNAFSVLFFVSVGMLFDPSILVSQPLAVIGALALVI
LGKAIITFLIVILLRYPIGLGLTLAGGLAQIGEFSFILAGLGVSLGLLPHEGQDLILAAAILSITLNPIVILATDGLKKF
VHSRWPSLWESYGRTRQKTLSKELEKIRALGEEREREHQLKMQQLIETFPLFSEVNEDAQEELLLLFKAKSAPPGERVIR
RGDRGDGMYFISSGAVEVRLASGAIRLEPGAFFGEMALLTGGRRTADVIAVDFCQFEVLERRDFNMFMSRHPNLRAAVSE
MAQKRTEMNDLRQQWEKSMDLS

Sequences:

>Translated_582_residues
MHQEVGLIATVAVSFVFAAILGYGADRLRLPPLVGYLLAGILMGPFTPGFVADTALAGQLAEMGVILLMFGVGLHFSASD
LLAVRGIAVPGAIGRIILATLLGIGLCKLWGWSLGAGIVLGLSLSVASTVVLLKALEERNLVNAPSGRVAVGWLIVEDLV
MVLALVLLPALAELLGGNAAATNNHGLGELSLALTIGLTLLKVAGFAAMAIFLGPRIVPWLLTMIARTGSRELFTLTVLA
IALGIAFGSAAIFGVSFALGAFFAGVVMSESQLSHRAAADSLPLQNAFSVLFFVSVGMLFDPSILVSQPLAVIGALALVI
LGKAIITFLIVILLRYPIGLGLTLAGGLAQIGEFSFILAGLGVSLGLLPHEGQDLILAAAILSITLNPIVILATDGLKKF
VHSRWPSLWESYGRTRQKTLSKELEKIRALGEEREREHQLKMQQLIETFPLFSEVNEDAQEELLLLFKAKSAPPGERVIR
RGDRGDGMYFISSGAVEVRLASGAIRLEPGAFFGEMALLTGGRRTADVIAVDFCQFEVLERRDFNMFMSRHPNLRAAVSE
MAQKRTEMNDLRQQWEKSMDLS
>Mature_582_residues
MHQEVGLIATVAVSFVFAAILGYGADRLRLPPLVGYLLAGILMGPFTPGFVADTALAGQLAEMGVILLMFGVGLHFSASD
LLAVRGIAVPGAIGRIILATLLGIGLCKLWGWSLGAGIVLGLSLSVASTVVLLKALEERNLVNAPSGRVAVGWLIVEDLV
MVLALVLLPALAELLGGNAAATNNHGLGELSLALTIGLTLLKVAGFAAMAIFLGPRIVPWLLTMIARTGSRELFTLTVLA
IALGIAFGSAAIFGVSFALGAFFAGVVMSESQLSHRAAADSLPLQNAFSVLFFVSVGMLFDPSILVSQPLAVIGALALVI
LGKAIITFLIVILLRYPIGLGLTLAGGLAQIGEFSFILAGLGVSLGLLPHEGQDLILAAAILSITLNPIVILATDGLKKF
VHSRWPSLWESYGRTRQKTLSKELEKIRALGEEREREHQLKMQQLIETFPLFSEVNEDAQEELLLLFKAKSAPPGERVIR
RGDRGDGMYFISSGAVEVRLASGAIRLEPGAFFGEMALLTGGRRTADVIAVDFCQFEVLERRDFNMFMSRHPNLRAAVSE
MAQKRTEMNDLRQQWEKSMDLS

Specific function: Unknown

COG id: COG4651

COG function: function code P; Kef-type K+ transport system, predicted NAD-binding component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI157388921, Length=363, Percent_Identity=26.4462809917355, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI156071470, Length=136, Percent_Identity=33.8235294117647, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI116325989, Length=133, Percent_Identity=33.8345864661654, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI4885407, Length=133, Percent_Identity=33.0827067669173, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI38327037, Length=159, Percent_Identity=33.9622641509434, Blast_Score=74, Evalue=5e-13,
Organism=Escherichia coli, GI1786685, Length=390, Percent_Identity=60.5128205128205, Blast_Score=426, Evalue=1e-120,
Organism=Escherichia coli, GI1786232, Length=380, Percent_Identity=31.0526315789474, Blast_Score=139, Evalue=5e-34,
Organism=Escherichia coli, GI1789749, Length=384, Percent_Identity=30.9895833333333, Blast_Score=126, Evalue=4e-30,
Organism=Drosophila melanogaster, GI221330263, Length=158, Percent_Identity=31.0126582278481, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI85725018, Length=158, Percent_Identity=31.0126582278481, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI85725022, Length=142, Percent_Identity=31.6901408450704, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221330257, Length=142, Percent_Identity=31.6901408450704, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI85725024, Length=142, Percent_Identity=31.6901408450704, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221330259, Length=142, Percent_Identity=31.6901408450704, Blast_Score=75, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153
- InterPro:   IPR004771
- InterPro:   IPR016040
- InterPro:   IPR003148 [H]

Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 62099; Mature: 62099

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS00888 CNMP_BINDING_1 ; PS00889 CNMP_BINDING_2 ; PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQEVGLIATVAVSFVFAAILGYGADRLRLPPLVGYLLAGILMGPFTPGFVADTALAGQL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AEMGVILLMFGVGLHFSASDLLAVRGIAVPGAIGRIILATLLGIGLCKLWGWSLGAGIVL
HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLSLSVASTVVLLKALEERNLVNAPSGRVAVGWLIVEDLVMVLALVLLPALAELLGGNAA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ATNNHGLGELSLALTIGLTLLKVAGFAAMAIFLGPRIVPWLLTMIARTGSRELFTLTVLA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHH
IALGIAFGSAAIFGVSFALGAFFAGVVMSESQLSHRAAADSLPLQNAFSVLFFVSVGMLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DPSILVSQPLAVIGALALVILGKAIITFLIVILLRYPIGLGLTLAGGLAQIGEFSFILAG
CCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LGVSLGLLPHEGQDLILAAAILSITLNPIVILATDGLKKFVHSRWPSLWESYGRTRQKTL
HHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCHHHHHHHCHHHHHHH
SKELEKIRALGEEREREHQLKMQQLIETFPLFSEVNEDAQEELLLLFKAKSAPPGERVIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHH
RGDRGDGMYFISSGAVEVRLASGAIRLEPGAFFGEMALLTGGRRTADVIAVDFCQFEVLE
CCCCCCCEEEEECCCEEEEEECCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
RRDFNMFMSRHPNLRAAVSEMAQKRTEMNDLRQQWEKSMDLS
HCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHQEVGLIATVAVSFVFAAILGYGADRLRLPPLVGYLLAGILMGPFTPGFVADTALAGQL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AEMGVILLMFGVGLHFSASDLLAVRGIAVPGAIGRIILATLLGIGLCKLWGWSLGAGIVL
HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLSLSVASTVVLLKALEERNLVNAPSGRVAVGWLIVEDLVMVLALVLLPALAELLGGNAA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ATNNHGLGELSLALTIGLTLLKVAGFAAMAIFLGPRIVPWLLTMIARTGSRELFTLTVLA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHH
IALGIAFGSAAIFGVSFALGAFFAGVVMSESQLSHRAAADSLPLQNAFSVLFFVSVGMLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DPSILVSQPLAVIGALALVILGKAIITFLIVILLRYPIGLGLTLAGGLAQIGEFSFILAG
CCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LGVSLGLLPHEGQDLILAAAILSITLNPIVILATDGLKKFVHSRWPSLWESYGRTRQKTL
HHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCHHHHHHHCHHHHHHH
SKELEKIRALGEEREREHQLKMQQLIETFPLFSEVNEDAQEELLLLFKAKSAPPGERVIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHH
RGDRGDGMYFISSGAVEVRLASGAIRLEPGAFFGEMALLTGGRRTADVIAVDFCQFEVLE
CCCCCCCEEEEECCCEEEEEECCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
RRDFNMFMSRHPNLRAAVSEMAQKRTEMNDLRQQWEKSMDLS
HCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 7721718 [H]