Click here to switch to the map view.

The map label for this gene is ytfP [H]

Identifier: 209551079

GI number: 209551079

Start: 3621716

End: 3622966

Strand: Direct

Name: ytfP [H]

Synonym: Rleg2_3503

Alternate gene names: 209551079

Gene position: 3621716-3622966 (Clockwise)

Preceding gene: 209551078

Following gene: 209551081

Centisome position: 79.81

GC content: 68.59

Gene sequence:

>1251_bases
ATGAGCCAGAAGCGAATTGCCATCATCGGCGGCGGCCCGGCGGGCCTGGCGGCCGCCGAACTGCTTTCGCTCTCCGGCCA
TGCGGTGACGGTCTACGACGCCATGCCGACTTTCGCCCGCAAGTTCCTGCTCGCCGGCAAATCGGGTCTGAACATCACCC
ATTCCGAGGATTATGCCCGTTTCGCCACGCGCTTCGGCCCGGCCTCCGCCCGCCTGCGCCCCGCCCTGGATGCCTTTACC
CCTGTCGATATCAGGGACTGGGCGGCAGGGCTCGGGACGGAGACCTTCGTCGGTTCGTCCGGCCGGGTCTTCCCGATGGT
GATGAAAGCCTCTCCCTTGCTGCGCGCCTGGCTCAAGCGATTGGAGGCGCAGGGTGCTGTGCTCCGCACCCGCCACCGTT
GGATCGGTTTTGCCGATGAGGGCTATGTTTTCGAAACGCCGGAAGGGCGCAGCATCGTCCATTGCGACGCCGCCCTGCTG
GCGCTCGGCGGCGCAAGCTGGCCGCGCCTCGGCTCGGATGCGGGCTGGCTGCCGTGGCTATCGGAGAAGGGTGTCGAGAT
CGACGCCTTCCAGCCCGCCAATTGCGGCTTCGTCGTCGGCTGGAGCGAAAACTTCCGCGAGCGTTTCGCCGGCGAGCCGG
TGAAATCGGTCACCGCCACCTCCGAAGCCGGCACTTTTCCCGGCGAATTCGTCATCACCACAACCGGCATCGAGGGCAGC
CTGGTCTACGCTCATGCGGCAAGCCTCCGCGACCGGCTGCTGGACCGCGGCAGCGCGGCCCTGACGCTCGACCTCGCCCC
GGGCCGGACAGTCGAAAGGCTGGCCCGCGATCTTGCGCGGCAGGACGCCAAATCGAGCTTTTCAACCCGCCTGCGCAAGG
GCGCCGGCCTCGACGGCGTCAAGGCGGCCTTGCTGCGGGAACTCGCTCCCGAGCGCGACAGAGCCGATCCCGGCCGTCTC
GCCGGCCTGATCAAGGCCCTGCCGGTGCCGGTTCTCGAGACAAGGCCGATCGGCGAGGCGATCTCCTCGGCCGGCGGCAT
CCGCTGGAGCGGCATCGACGACGGCTTCATGTTGACGGCGCTGCCGGGCACCTTCGTCGCCGGCGAGATGCTTGACTGGG
AGGCGCCGACCGGCGGCTACCTCCTCACCGCCTGCCTTGCGACCGGCCGGGCCGCTGCGCGCGGCATTGAGGCTTGGCTG
CACGGATACGGGCGCTCGCCGGCACTGAACGACAAACAGGACCTTCCCTGA

Upstream 100 bases:

>100_bases
GACCACGGCCAGTGCACGCATTCGCATCACTGATCCCGCCCTTGCAGGCAAGGCGCAGCCGCGCCAAAACGGCACCAGAA
AGAATCGGGCAAAGACATCC

Downstream 100 bases:

>100_bases
ATCAGGCCGAGGCTGGATGAAACGTCATGACAAGCCCATTCATGCAGTAGCGAAGTCCGGTTGGCTTCGGACCATCATCG
AAGACATGGCCGAGATGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MSQKRIAIIGGGPAGLAAAELLSLSGHAVTVYDAMPTFARKFLLAGKSGLNITHSEDYARFATRFGPASARLRPALDAFT
PVDIRDWAAGLGTETFVGSSGRVFPMVMKASPLLRAWLKRLEAQGAVLRTRHRWIGFADEGYVFETPEGRSIVHCDAALL
ALGGASWPRLGSDAGWLPWLSEKGVEIDAFQPANCGFVVGWSENFRERFAGEPVKSVTATSEAGTFPGEFVITTTGIEGS
LVYAHAASLRDRLLDRGSAALTLDLAPGRTVERLARDLARQDAKSSFSTRLRKGAGLDGVKAALLRELAPERDRADPGRL
AGLIKALPVPVLETRPIGEAISSAGGIRWSGIDDGFMLTALPGTFVAGEMLDWEAPTGGYLLTACLATGRAAARGIEAWL
HGYGRSPALNDKQDLP

Sequences:

>Translated_416_residues
MSQKRIAIIGGGPAGLAAAELLSLSGHAVTVYDAMPTFARKFLLAGKSGLNITHSEDYARFATRFGPASARLRPALDAFT
PVDIRDWAAGLGTETFVGSSGRVFPMVMKASPLLRAWLKRLEAQGAVLRTRHRWIGFADEGYVFETPEGRSIVHCDAALL
ALGGASWPRLGSDAGWLPWLSEKGVEIDAFQPANCGFVVGWSENFRERFAGEPVKSVTATSEAGTFPGEFVITTTGIEGS
LVYAHAASLRDRLLDRGSAALTLDLAPGRTVERLARDLARQDAKSSFSTRLRKGAGLDGVKAALLRELAPERDRADPGRL
AGLIKALPVPVLETRPIGEAISSAGGIRWSGIDDGFMLTALPGTFVAGEMLDWEAPTGGYLLTACLATGRAAARGIEAWL
HGYGRSPALNDKQDLP
>Mature_415_residues
SQKRIAIIGGGPAGLAAAELLSLSGHAVTVYDAMPTFARKFLLAGKSGLNITHSEDYARFATRFGPASARLRPALDAFTP
VDIRDWAAGLGTETFVGSSGRVFPMVMKASPLLRAWLKRLEAQGAVLRTRHRWIGFADEGYVFETPEGRSIVHCDAALLA
LGGASWPRLGSDAGWLPWLSEKGVEIDAFQPANCGFVVGWSENFRERFAGEPVKSVTATSEAGTFPGEFVITTTGIEGSL
VYAHAASLRDRLLDRGSAALTLDLAPGRTVERLARDLARQDAKSSFSTRLRKGAGLDGVKAALLRELAPERDRADPGRLA
GLIKALPVPVLETRPIGEAISSAGGIRWSGIDDGFMLTALPGTFVAGEMLDWEAPTGGYLLTACLATGRAAARGIEAWLH
GYGRSPALNDKQDLP

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 44283; Mature: 44152

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKRIAIIGGGPAGLAAAELLSLSGHAVTVYDAMPTFARKFLLAGKSGLNITHSEDYAR
CCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHH
FATRFGPASARLRPALDAFTPVDIRDWAAGLGTETFVGSSGRVFPMVMKASPLLRAWLKR
HHHHCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCEECCCCCEEEEEHHCCHHHHHHHHH
LEAQGAVLRTRHRWIGFADEGYVFETPEGRSIVHCDAALLALGGASWPRLGSDAGWLPWL
HHHCCHHEEEHHHEEEECCCCCEEECCCCCEEEEECHHHHHHCCCCCCCCCCCCCCCCCC
SEKGVEIDAFQPANCGFVVGWSENFRERFAGEPVKSVTATSEAGTFPGEFVITTTGIEGS
CCCCCEEECCCCCCCCEEEECCHHHHHHHCCCCHHHHCCCCCCCCCCCCEEEEECCCCCC
LVYAHAASLRDRLLDRGSAALTLDLAPGRTVERLARDLARQDAKSSFSTRLRKGAGLDGV
EEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KAALLRELAPERDRADPGRLAGLIKALPVPVLETRPIGEAISSAGGIRWSGIDDGFMLTA
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEECCCCCCEEEEE
LPGTFVAGEMLDWEAPTGGYLLTACLATGRAAARGIEAWLHGYGRSPALNDKQDLP
CCCCHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SQKRIAIIGGGPAGLAAAELLSLSGHAVTVYDAMPTFARKFLLAGKSGLNITHSEDYAR
CCCEEEEECCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHH
FATRFGPASARLRPALDAFTPVDIRDWAAGLGTETFVGSSGRVFPMVMKASPLLRAWLKR
HHHHCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCEECCCCCEEEEEHHCCHHHHHHHHH
LEAQGAVLRTRHRWIGFADEGYVFETPEGRSIVHCDAALLALGGASWPRLGSDAGWLPWL
HHHCCHHEEEHHHEEEECCCCCEEECCCCCEEEEECHHHHHHCCCCCCCCCCCCCCCCCC
SEKGVEIDAFQPANCGFVVGWSENFRERFAGEPVKSVTATSEAGTFPGEFVITTTGIEGS
CCCCCEEECCCCCCCCEEEECCHHHHHHHCCCCHHHHCCCCCCCCCCCCEEEEECCCCCC
LVYAHAASLRDRLLDRGSAALTLDLAPGRTVERLARDLARQDAKSSFSTRLRKGAGLDGV
EEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KAALLRELAPERDRADPGRLAGLIKALPVPVLETRPIGEAISSAGGIRWSGIDDGFMLTA
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEECCCCCCEEEEE
LPGTFVAGEMLDWEAPTGGYLLTACLATGRAAARGIEAWLHGYGRSPALNDKQDLP
CCCCHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]