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The map label for this gene is yiaN [C]

Identifier: 209550949

GI number: 209550949

Start: 3485056

End: 3486546

Strand: Direct

Name: yiaN [C]

Synonym: Rleg2_3373

Alternate gene names: 209550949

Gene position: 3485056-3486546 (Clockwise)

Preceding gene: 209550948

Following gene: 209550951

Centisome position: 76.8

GC content: 63.72

Gene sequence:

>1491_bases
TTGTTTGATTTCGGCATCATCCCGCCGGCGATGTTCCTGGGCATGATCATCTTCATGCTCTACGGCTTTCCGGTCGCCTT
CTCGCTGGCCGCGGTCGGCCTGTTTTTCGGCATCATCGGCATCATCACCGGCCATTTCGGCGAAGTCTTCCTGCAGGCGC
TGCCGCTGCGCTTCTTCGGCATCCTTTCCAACGACCTGCTGCTCGCCATCCCCTTCTTCACCTTCATGGGGGCGGTACTG
GAGCGCTGCGGGCTGGCCGAGGACCTGCTCGAAGGCACCGGCAAACTCTTCGGCGGCATACCCGGCGGCCTCGCCTACGC
CGTCATCCTCGTCGGCGCGGTCCTCGGCGCCATCACCGGCACGGTGGCCGCGTCCGTCATCACCATGGGCGTGATCTCGC
TGCCGATCATGCTGCGCTACGGCTATAGCCCGCGCCTTGCCACCGGCGTCATCGCCGCCTCCGGCACCATCACCCAGGTG
ATCCCGCCTTCTCTCGTGCTCGTCGTTCTTGCCGACCAGCTCGGCAGGTCGGTCGGCGACATGTATCTCGGCGCGATCGG
CCCCTCGATCCTGCAGGTGTCGATCTTCGTGCTCTTCATCCTGGTGTTGTCGATCATCCGGCCGAAATCGATGCCGCCGC
TGCCGAAGGAAGTGCGCGGCGACTTCAACTGGGCGCTTCTCGCCAGAGTGCTGATGGGCATGGTGCCCTCGATCGTGCTG
ATCTTCCTGGTGCTCGGCACGATCTTCATGGGCCTTGCAACGCCGACGGAAGCCGGTGCGCTTGGTGTCGTCGGCGCCAT
GGCGCTCGCCGCCATGAATCGCCGCCTGACCTGGCCGCTGATCCGCGAGGCGATGACATCGACCACTCACATCACATCCA
TGGTGGTGATGATCCTGATCGGCTCCACCTGTTTCAGTCTGGTCTTCCAGGGCATGGACGGCTCGCGCTGGATCGAGCAC
ATGCTGTCGGGCATTCCCGGCGGCACGGTCGGCTTCCTGATCTTCGTCAATATCTTCATCTTCGTGCTCGCCTTCTTCCT
CGACTTCTTCGAGATCGCTTTCATCGTCATCCCGATGCTCGCCCCCGTCGCCTCGCATCTCGGCATCGACCTCATCTGGT
TCGGCGTCCTGATCTGCGTCAACATGCAGACGAGCTTCATGCACCCGCCCTTCGGCTTCGCGCTGTTCTACCTGCGCTCG
ATCGCCAGCAAGGACGTCAAGACCTCGGATATCTACATGGGCGCTCTCCCCTGGGTCGGCATGCAGCTGATCCTGGTGGC
GATCGTGATCTTCTGGCCGCAATCGGTGACCTATTGGCTGGATCACGGCCCGAAGGTCGATCCGAACTCGATCAAGATCG
AAGTCCCGGGCTTCGGCGGCCAGCTCGGCCTTCCCCCGATTGGCGGCGGCGGCAACGGCTCGCCGCAGATCCCCGGCCTG
ACCCTGCCCCCACTCGGCTTGCCGGGAGCGCCGCCGCCACCGGCCAAATAA

Upstream 100 bases:

>100_bases
TTTCCGAGCTGATCAAGCGGATCGCCGCCCTGACCGGCCACCTCAAGATCGACCTGACATATGAAAAGCCGCTGCAGTAA
CGCGGGCTGGGAGAATACAG

Downstream 100 bases:

>100_bases
CCCCGCCAATAACAGGGCAAAACAAAACCCCGGATCAAGCGATCCGGGGTTTTGGTATGCGTTGGCGTCGTGTGCCGATG
GAAGCCTTCAGAGCTTTCCG

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MFDFGIIPPAMFLGMIIFMLYGFPVAFSLAAVGLFFGIIGIITGHFGEVFLQALPLRFFGILSNDLLLAIPFFTFMGAVL
ERCGLAEDLLEGTGKLFGGIPGGLAYAVILVGAVLGAITGTVAASVITMGVISLPIMLRYGYSPRLATGVIAASGTITQV
IPPSLVLVVLADQLGRSVGDMYLGAIGPSILQVSIFVLFILVLSIIRPKSMPPLPKEVRGDFNWALLARVLMGMVPSIVL
IFLVLGTIFMGLATPTEAGALGVVGAMALAAMNRRLTWPLIREAMTSTTHITSMVVMILIGSTCFSLVFQGMDGSRWIEH
MLSGIPGGTVGFLIFVNIFIFVLAFFLDFFEIAFIVIPMLAPVASHLGIDLIWFGVLICVNMQTSFMHPPFGFALFYLRS
IASKDVKTSDIYMGALPWVGMQLILVAIVIFWPQSVTYWLDHGPKVDPNSIKIEVPGFGGQLGLPPIGGGGNGSPQIPGL
TLPPLGLPGAPPPPAK

Sequences:

>Translated_496_residues
MFDFGIIPPAMFLGMIIFMLYGFPVAFSLAAVGLFFGIIGIITGHFGEVFLQALPLRFFGILSNDLLLAIPFFTFMGAVL
ERCGLAEDLLEGTGKLFGGIPGGLAYAVILVGAVLGAITGTVAASVITMGVISLPIMLRYGYSPRLATGVIAASGTITQV
IPPSLVLVVLADQLGRSVGDMYLGAIGPSILQVSIFVLFILVLSIIRPKSMPPLPKEVRGDFNWALLARVLMGMVPSIVL
IFLVLGTIFMGLATPTEAGALGVVGAMALAAMNRRLTWPLIREAMTSTTHITSMVVMILIGSTCFSLVFQGMDGSRWIEH
MLSGIPGGTVGFLIFVNIFIFVLAFFLDFFEIAFIVIPMLAPVASHLGIDLIWFGVLICVNMQTSFMHPPFGFALFYLRS
IASKDVKTSDIYMGALPWVGMQLILVAIVIFWPQSVTYWLDHGPKVDPNSIKIEVPGFGGQLGLPPIGGGGNGSPQIPGL
TLPPLGLPGAPPPPAK
>Mature_496_residues
MFDFGIIPPAMFLGMIIFMLYGFPVAFSLAAVGLFFGIIGIITGHFGEVFLQALPLRFFGILSNDLLLAIPFFTFMGAVL
ERCGLAEDLLEGTGKLFGGIPGGLAYAVILVGAVLGAITGTVAASVITMGVISLPIMLRYGYSPRLATGVIAASGTITQV
IPPSLVLVVLADQLGRSVGDMYLGAIGPSILQVSIFVLFILVLSIIRPKSMPPLPKEVRGDFNWALLARVLMGMVPSIVL
IFLVLGTIFMGLATPTEAGALGVVGAMALAAMNRRLTWPLIREAMTSTTHITSMVVMILIGSTCFSLVFQGMDGSRWIEH
MLSGIPGGTVGFLIFVNIFIFVLAFFLDFFEIAFIVIPMLAPVASHLGIDLIWFGVLICVNMQTSFMHPPFGFALFYLRS
IASKDVKTSDIYMGALPWVGMQLILVAIVIFWPQSVTYWLDHGPKVDPNSIKIEVPGFGGQLGLPPIGGGGNGSPQIPGL
TLPPLGLPGAPPPPAK

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=355, Percent_Identity=25.3521126760563, Blast_Score=95, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 52733; Mature: 52733

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]