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The map label for this gene is 209550948

Identifier: 209550948

GI number: 209550948

Start: 3484496

End: 3485035

Strand: Direct

Name: 209550948

Synonym: Rleg2_3372

Alternate gene names: NA

Gene position: 3484496-3485035 (Clockwise)

Preceding gene: 209550941

Following gene: 209550949

Centisome position: 76.79

GC content: 56.85

Gene sequence:

>540_bases
ATGTCGGGACTTCTGGCGGCAAGCCGGCTGATCGATTCGGTCAGTCGGATCATGGGCAAACTTTCCGAATATATGGTGCT
GTTCTGCTGTCTGATCAGCGCCGGAAACGCCATCGTCCGCTACGCCTTCAATTACAGTTCGAACGGCTGGCTCGAGATCC
AATGGTATCTCTTCGCCTTCGTCGTCATGCTCGGCGCCTCGCATGCATTGCGCAACAACGAGCATGTCCGCGTCGATCTG
ATCTATGGTGCGGTTTCCGACAAAGCGAAGATCTGGATCGACATCTTCGGCCTCATCGTCTTTCTGATCCCGGTTTGCAT
CTTCCTCACTTGGCTCTGCTGGCCCTTCTTCACGCTGTCCTACCAGCAGGGAGAAATATCGGGCAATGCCGGCGGGCTGA
TCCGCTGGCCCGTCAAGCTGATCCTCGTCGCCGGTTTCGCATTGCTCTCCCTTCAGGGCGTTTCCGAGCTGATCAAGCGG
ATCGCCGCCCTGACCGGCCACCTCAAGATCGACCTGACATATGAAAAGCCGCTGCAGTAA

Upstream 100 bases:

>100_bases
GGCGAGGCATTTATCCTTCCAATTTCCAAGGCCGTGGTCTACATCGATTGCAAGAGGGAAAGCTGCCGGGAAAACGGCAG
GACAAGAACAAGGGAAACGA

Downstream 100 bases:

>100_bases
CGCGGGCTGGGAGAATACAGTTGTTTGATTTCGGCATCATCCCGCCGGCGATGTTCCTGGGCATGATCATCTTCATGCTC
TACGGCTTTCCGGTCGCCTT

Product: tripartite ATP-independent periplasmic transporter DctQ component

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transporter Family Protein DctQ Subunit; Tripartite Transporter Small Subunit; TRAP-T Family Tripartite Transporter; C4-Dicarboxylate Transporter Permease; Tripartite ATP-Independent Periplasmic Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; Permease Component Of C4 Dicarboxylate Transporter; Permease; Transmembrane Transporter Component; TRAP C4-Dicarboxylate Transport System DctQ Subunit; TRAP Dicarboxylate Family Transporter DctQ Subunit; TRAP-Type Transporter Small Permease Component; Small Permease Of TRAP-Type Transporter; Trap Dicarboxylate Transporter Dctm Subunit; Trap-Type Transport System Small Permease Component; TRAP Dicarboxylate Transporter; TRAP-Type Large Permease Component; Mannitol Transporter; TRAP Transporter Small Transmembrane Protein; TRAP Transporter DctQ-Like Membrane Protein Family; Triosephosphate Isomerase (TIM; TRAP-Type Transport System Small Permease Component; TRAP Transporter Small Subunit; TRAP Dicarboxylate Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic Protein; Tripartite ATP-Independent Periplasmic; C4-Dicarboxylate Transporter Small Subunit

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSGLLAASRLIDSVSRIMGKLSEYMVLFCCLISAGNAIVRYAFNYSSNGWLEIQWYLFAFVVMLGASHALRNNEHVRVDL
IYGAVSDKAKIWIDIFGLIVFLIPVCIFLTWLCWPFFTLSYQQGEISGNAGGLIRWPVKLILVAGFALLSLQGVSELIKR
IAALTGHLKIDLTYEKPLQ

Sequences:

>Translated_179_residues
MSGLLAASRLIDSVSRIMGKLSEYMVLFCCLISAGNAIVRYAFNYSSNGWLEIQWYLFAFVVMLGASHALRNNEHVRVDL
IYGAVSDKAKIWIDIFGLIVFLIPVCIFLTWLCWPFFTLSYQQGEISGNAGGLIRWPVKLILVAGFALLSLQGVSELIKR
IAALTGHLKIDLTYEKPLQ
>Mature_178_residues
SGLLAASRLIDSVSRIMGKLSEYMVLFCCLISAGNAIVRYAFNYSSNGWLEIQWYLFAFVVMLGASHALRNNEHVRVDLI
YGAVSDKAKIWIDIFGLIVFLIPVCIFLTWLCWPFFTLSYQQGEISGNAGGLIRWPVKLILVAGFALLSLQGVSELIKRI
AALTGHLKIDLTYEKPLQ

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20022; Mature: 19891

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLLAASRLIDSVSRIMGKLSEYMVLFCCLISAGNAIVRYAFNYSSNGWLEIQWYLFAF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEHHHHHHH
VVMLGASHALRNNEHVRVDLIYGAVSDKAKIWIDIFGLIVFLIPVCIFLTWLCWPFFTLS
HHHHCCHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YQQGEISGNAGGLIRWPVKLILVAGFALLSLQGVSELIKRIAALTGHLKIDLTYEKPLQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
>Mature Secondary Structure 
SGLLAASRLIDSVSRIMGKLSEYMVLFCCLISAGNAIVRYAFNYSSNGWLEIQWYLFAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEHHHHHHH
VVMLGASHALRNNEHVRVDLIYGAVSDKAKIWIDIFGLIVFLIPVCIFLTWLCWPFFTLS
HHHHCCHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YQQGEISGNAGGLIRWPVKLILVAGFALLSLQGVSELIKRIAALTGHLKIDLTYEKPLQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA